RNA–Protein interactions for RNA: ENST00000537955.1

DENR-203, Transcript of density regulated re-initiation and release factor, humanhuman

TSL 2

Gene DENR, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-203ENST00000537955 LGALS3P17931 250 aaKnown RBP13.83□□□□□ -0.2
DENR-203ENST00000537955 LINC00158P58513 81 aa13.83□□□□□ -0.2
DENR-203ENST00000537955 MEIG1Q5JSS6 88 aa13.83□□□□□ -0.2
DENR-203ENST00000537955 HIST3H2BBQ8N257 126 aa13.83□□□□□ -0.2
DENR-203ENST00000537955 S100A6P06703 90 aa13.82□□□□□ -0.2
DENR-203ENST00000537955 MRPL55Q7Z7F7 128 aaKnown RBP13.82□□□□□ -0.2
DENR-203ENST00000537955 KRTAP11-1Q8IUC1 163 aa13.81□□□□□ -0.2
DENR-203ENST00000537955 SMIM13P0DJ93 91 aa13.8□□□□□ -0.2
DENR-203ENST00000537955 S100A2P29034 98 aa13.8□□□□□ -0.2
DENR-203ENST00000537955 C1orf137Q5JT78 98 aa13.8□□□□□ -0.2
DENR-203ENST00000537955 AKR1D1P51857 326 aa13.79□□□□□ -0.2
DENR-203ENST00000537955 NKAPP1Q8N9T2 125 aa13.79□□□□□ -0.2
DENR-203ENST00000537955 HIST1H2BLQ99880 126 aa13.79□□□□□ -0.2
DENR-203ENST00000537955 KRTAP29-1A8MX34 341 aaPredicted RBP13.78□□□□□ -0.2
DENR-203ENST00000537955 A0A0U1RRA0 63 aa13.77□□□□□ -0.21
DENR-203ENST00000537955 VPREB1P12018 145 aa13.77□□□□□ -0.21
DENR-203ENST00000537955 RPL24P83731 157 aaKnown RBP13.77□□□□□ -0.21
DENR-203ENST00000537955 SPINK6Q6UWN8 80 aa13.77□□□□□ -0.21
DENR-203ENST00000537955 OXTP01178 125 aa13.76□□□□□ -0.21
DENR-203ENST00000537955 MIR7-3HGQ8N6C7 128 aa13.76□□□□□ -0.21
DENR-203ENST00000537955 DMBT1Q9UGM3 2413 aaPredicted RBP13.76□□□□□ -0.21
DENR-203ENST00000537955 SRSF9Q13242 221 aaKnown RBP eCLIP13.75□□□□□ -0.21
DENR-203ENST00000537955 IGLV7-43P04211 117 aa13.74□□□□□ -0.21
DENR-203ENST00000537955 LINC00167Q96N53 147 aa13.74□□□□□ -0.21
DENR-203ENST00000537955 FAT3Q8TDW7 4589 aa13.73□□□□□ -0.21
DENR-203ENST00000537955 SNRPEP62304 92 aaKnown RBP13.71□□□□□ -0.21
DENR-203ENST00000537955 Q8NDZ9 215 aa13.71□□□□□ -0.21
DENR-203ENST00000537955 LRP1Q07954 4544 aaKnown RBP13.71□□□□□ -0.22
DENR-203ENST00000537955 GAGE10A6NGK3 116 aa13.7□□□□□ -0.22
DENR-203ENST00000537955 IGKV2D-26A0A0A0MRZ7 120 aa13.69□□□□□ -0.22
DENR-203ENST00000537955 A0A0J9YXY3 114 aa13.69□□□□□ -0.22
DENR-203ENST00000537955 J3QL48 77 aa13.69□□□□□ -0.22
DENR-203ENST00000537955 C5orf52A6NGY3 159 aa13.68□□□□□ -0.22
DENR-203ENST00000537955 RPL37AP8A6NKH3 93 aa13.68□□□□□ -0.22
DENR-203ENST00000537955 BOD1L2Q8IYS8 172 aa13.68□□□□□ -0.22
DENR-203ENST00000537955 LOC107984156A0A0G2JMH3 177 aa13.67□□□□□ -0.22
DENR-203ENST00000537955 REG3GQ6UW15 175 aa13.67□□□□□ -0.22
DENR-203ENST00000537955 ARL17AQ8IVW1 177 aa13.67□□□□□ -0.22
DENR-203ENST00000537955 ATOH7Q8N100 152 aa13.67□□□□□ -0.22
DENR-203ENST00000537955 ZNF815PA8K554 130 aa13.66□□□□□ -0.22
DENR-203ENST00000537955 DAND5Q8N907 189 aa13.66□□□□□ -0.22
DENR-203ENST00000537955 DIRC1Q969H9 104 aa13.66□□□□□ -0.22
DENR-203ENST00000537955 BCE1O60756 84 aa13.65□□□□□ -0.22
DENR-203ENST00000537955 ANKRD39Q53RE8 183 aa13.65□□□□□ -0.22
DENR-203ENST00000537955 IGLV1-50A0A075B6I6 118 aa13.64□□□□□ -0.23
DENR-203ENST00000537955 IGKV2-28A0A075B6P5 120 aa13.64□□□□□ -0.23
DENR-203ENST00000537955 M0R378 163 aa13.64□□□□□ -0.23
DENR-203ENST00000537955 TIMM17BO60830 172 aa13.64□□□□□ -0.23
DENR-203ENST00000537955 IGKV2D-28P01615 120 aa13.64□□□□□ -0.23
DENR-203ENST00000537955 MIEN1Q9BRT3 115 aa13.64□□□□□ -0.23
DENR-203ENST00000537955 H0Y9J4 135 aa13.62□□□□□ -0.23
DENR-203ENST00000537955 TTTY13Q9BZ97 58 aa13.62□□□□□ -0.23
DENR-203ENST00000537955 ZNF861PO60384 105 aa13.61□□□□□ -0.23
DENR-203ENST00000537955 LITAFQ99732 161 aa13.61□□□□□ -0.23
DENR-203ENST00000537955 ADAMTSL4-AS1Q5T5F5 129 aa13.6□□□□□ -0.23
DENR-203ENST00000537955 NCR3O14931 201 aa13.59□□□□□ -0.23
DENR-203ENST00000537955 RPL28P46779 137 aaKnown RBP13.59□□□□□ -0.23
DENR-203ENST00000537955 LINC01600Q96MT4 127 aa13.59□□□□□ -0.23
DENR-203ENST00000537955 NDUFC2O95298 119 aa13.58□□□□□ -0.24
DENR-203ENST00000537955 TMEM126AQ9H061 195 aa13.58□□□□□ -0.24
DENR-203ENST00000537955 TRBV10-2A0A0K0K1G8 114 aa13.57□□□□□ -0.24
DENR-203ENST00000537955 SPANXB1Q9NS25 103 aaPredicted RBP13.57□□□□□ -0.24
DENR-203ENST00000537955 HSBP1L1C9JCN9 74 aa13.56□□□□□ -0.24
DENR-203ENST00000537955 MT1HL1P0DM35 61 aa13.56□□□□□ -0.24
DENR-203ENST00000537955 SOSTDC1Q6X4U4 206 aa13.56□□□□□ -0.24
DENR-203ENST00000537955 HERC1Q15751 4861 aa13.55□□□□□ -0.24
DENR-203ENST00000537955 TMEM238C9JI98 176 aa13.55□□□□□ -0.24
DENR-203ENST00000537955 SCGB1D4Q6XE38 83 aa13.55□□□□□ -0.24
DENR-203ENST00000537955 KRTAP13-1Q8IUC0 172 aa13.55□□□□□ -0.24
DENR-203ENST00000537955 PRYO14603 147 aa13.54□□□□□ -0.24
DENR-203ENST00000537955 UBE2AP49459 152 aa13.54□□□□□ -0.24
DENR-203ENST00000537955 SCGB1D1O95968 90 aa13.53□□□□□ -0.24
DENR-203ENST00000537955 NPC2P61916 151 aa13.53□□□□□ -0.24
DENR-203ENST00000537955 PCP2Q8IVA1 136 aa13.53□□□□□ -0.24
DENR-203ENST00000537955 LINC00308Q8TCZ7 52 aa13.53□□□□□ -0.24
DENR-203ENST00000537955 EIF4EBP3O60516 100 aaPredicted RBP13.52□□□□□ -0.25
DENR-203ENST00000537955 TRBV10-3A0A0K0K1G6 114 aa13.51□□□□□ -0.25
DENR-203ENST00000537955 SPANXDQ9BXN6 97 aa13.51□□□□□ -0.25
DENR-203ENST00000537955 KCNQ1DNQ9H478 68 aa13.51□□□□□ -0.25
DENR-203ENST00000537955 SPANXCQ9NY87 97 aa13.51□□□□□ -0.25
DENR-203ENST00000537955 S100A12P80511 92 aa13.5□□□□□ -0.25
DENR-203ENST00000537955 FAM19A1Q7Z5A9 133 aa13.5□□□□□ -0.25
DENR-203ENST00000537955 KRTAP1-4P0C5Y4 121 aa13.48□□□□□ -0.25
DENR-203ENST00000537955 DDTP30046 118 aa13.48□□□□□ -0.25
DENR-203ENST00000537955 SPRR1AP35321 89 aa13.48□□□□□ -0.25
DENR-203ENST00000537955 PRLHP81277 87 aa13.48□□□□□ -0.25
DENR-203ENST00000537955 PPDPFQ9H3Y8 114 aa13.48□□□□□ -0.25
DENR-203ENST00000537955 Q6ZVH6 145 aa13.47□□□□□ -0.25
DENR-203ENST00000537955 COPS9Q8WXC6 57 aa13.47□□□□□ -0.25
DENR-203ENST00000537955 TNXBP22105 4242 aa13.46□□□□□ -0.25
DENR-203ENST00000537955 IGLV6-57P01721 117 aa13.46□□□□□ -0.25
DENR-203ENST00000537955 LINC00337Q8N6G1 96 aa13.46□□□□□ -0.25
DENR-203ENST00000537955 S100A7L2Q5SY68 101 aa13.45□□□□□ -0.26
DENR-203ENST00000537955 IFITM1P13164 125 aa13.44□□□□□ -0.26
DENR-203ENST00000537955 KRTAP10-8P60410 259 aa13.44□□□□□ -0.26
DENR-203ENST00000537955 KRTAP4-16G5E9R7 235 aaPredicted RBP13.42□□□□□ -0.26
DENR-203ENST00000537955 ETDCA0A1B0GVM5 59 aa13.41□□□□□ -0.26
DENR-203ENST00000537955 JOSD1Q15040 202 aaPredicted RBP13.41□□□□□ -0.26
DENR-203ENST00000537955 TMA7Q9Y2S6 64 aaKnown RBP13.41□□□□□ -0.26
DENR-203ENST00000537955 CBY1Q9Y3M2 126 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms