RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 LGALS3P17931 250 aaKnown RBP12.96□□□□□ -0.34
LPCAT3-204ENST00000536797 C1orf137Q5JT78 98 aa12.96□□□□□ -0.34
LPCAT3-204ENST00000536797 A0A0U1RRA0 63 aa12.95□□□□□ -0.34
LPCAT3-204ENST00000536797 LINC00587B1AMM8 73 aa12.95□□□□□ -0.34
LPCAT3-204ENST00000536797 MRPL55Q7Z7F7 128 aaKnown RBP12.95□□□□□ -0.34
LPCAT3-204ENST00000536797 KRTAP11-1Q8IUC1 163 aa12.95□□□□□ -0.34
LPCAT3-204ENST00000536797 E9PLD3 99 aa12.94□□□□□ -0.34
LPCAT3-204ENST00000536797 SMIM13P0DJ93 91 aa12.94□□□□□ -0.34
LPCAT3-204ENST00000536797 NMUP48645 174 aa12.94□□□□□ -0.34
LPCAT3-204ENST00000536797 NKAPP1Q8N9T2 125 aa12.94□□□□□ -0.34
LPCAT3-204ENST00000536797 IGLV5-37A0A075B6J1 123 aa12.93□□□□□ -0.34
LPCAT3-204ENST00000536797 C20orf202A1L168 122 aa12.93□□□□□ -0.34
LPCAT3-204ENST00000536797 LRP1Q07954 4544 aaKnown RBP12.93□□□□□ -0.34
LPCAT3-204ENST00000536797 KRTAP29-1A8MX34 341 aaPredicted RBP12.92□□□□□ -0.34
LPCAT3-204ENST00000536797 S100A2P29034 98 aa12.92□□□□□ -0.34
LPCAT3-204ENST00000536797 HIST3H2BBQ8N257 126 aa12.92□□□□□ -0.34
LPCAT3-204ENST00000536797 SPINK6Q6UWN8 80 aa12.91□□□□□ -0.34
LPCAT3-204ENST00000536797 OXTP01178 125 aa12.9□□□□□ -0.34
LPCAT3-204ENST00000536797 RPL24P83731 157 aaKnown RBP12.9□□□□□ -0.34
LPCAT3-204ENST00000536797 J3QL48 77 aa12.89□□□□□ -0.35
LPCAT3-204ENST00000536797 SRSF9Q13242 221 aaKnown RBP eCLIP12.89□□□□□ -0.35
LPCAT3-204ENST00000536797 MIR7-3HGQ8N6C7 128 aa12.89□□□□□ -0.35
LPCAT3-204ENST00000536797 LINC00167Q96N53 147 aa12.89□□□□□ -0.35
LPCAT3-204ENST00000536797 C5orf52A6NGY3 159 aa12.88□□□□□ -0.35
LPCAT3-204ENST00000536797 VPREB1P12018 145 aa12.88□□□□□ -0.35
LPCAT3-204ENST00000536797 SNRPEP62304 92 aaKnown RBP12.88□□□□□ -0.35
LPCAT3-204ENST00000536797 GAGE10A6NGK3 116 aa12.88□□□□□ -0.35
LPCAT3-204ENST00000536797 IGLV7-43P04211 117 aa12.88□□□□□ -0.35
LPCAT3-204ENST00000536797 HIST1H2BLQ99880 126 aa12.88□□□□□ -0.35
LPCAT3-204ENST00000536797 AKR1D1P51857 326 aa12.87□□□□□ -0.35
LPCAT3-204ENST00000536797 RPL37AP8A6NKH3 93 aa12.86□□□□□ -0.35
LPCAT3-204ENST00000536797 Q8NDZ9 215 aa12.84□□□□□ -0.35
LPCAT3-204ENST00000536797 DMBT1Q9UGM3 2413 aaPredicted RBP12.82□□□□□ -0.36
LPCAT3-204ENST00000536797 A0A0J9YXY3 114 aa12.82□□□□□ -0.36
LPCAT3-204ENST00000536797 REG3GQ6UW15 175 aa12.82□□□□□ -0.36
LPCAT3-204ENST00000536797 BOD1L2Q8IYS8 172 aa12.82□□□□□ -0.36
LPCAT3-204ENST00000536797 ATOH7Q8N100 152 aa12.81□□□□□ -0.36
LPCAT3-204ENST00000536797 DAND5Q8N907 189 aa12.81□□□□□ -0.36
LPCAT3-204ENST00000536797 IGKV2-28A0A075B6P5 120 aa12.8□□□□□ -0.36
LPCAT3-204ENST00000536797 IGKV2D-26A0A0A0MRZ7 120 aa12.8□□□□□ -0.36
LPCAT3-204ENST00000536797 IGKV2D-28P01615 120 aa12.8□□□□□ -0.36
LPCAT3-204ENST00000536797 DIRC1Q969H9 104 aa12.79□□□□□ -0.36
LPCAT3-204ENST00000536797 IGLV1-50A0A075B6I6 118 aa12.79□□□□□ -0.36
LPCAT3-204ENST00000536797 ZNF815PA8K554 130 aa12.79□□□□□ -0.36
LPCAT3-204ENST00000536797 MIEN1Q9BRT3 115 aa12.79□□□□□ -0.36
LPCAT3-204ENST00000536797 HERC1Q15751 4861 aa12.78□□□□□ -0.36
LPCAT3-204ENST00000536797 M0R378 163 aa12.78□□□□□ -0.36
LPCAT3-204ENST00000536797 BCE1O60756 84 aa12.78□□□□□ -0.36
LPCAT3-204ENST00000536797 LOC107984156A0A0G2JMH3 177 aa12.77□□□□□ -0.37
LPCAT3-204ENST00000536797 ANKRD39Q53RE8 183 aa12.77□□□□□ -0.37
LPCAT3-204ENST00000536797 ARL17AQ8IVW1 177 aa12.77□□□□□ -0.37
LPCAT3-204ENST00000536797 TTTY13Q9BZ97 58 aa12.77□□□□□ -0.37
LPCAT3-204ENST00000536797 H0Y9J4 135 aa12.76□□□□□ -0.37
LPCAT3-204ENST00000536797 ZNF861PO60384 105 aa12.76□□□□□ -0.37
LPCAT3-204ENST00000536797 NCR3O14931 201 aa12.75□□□□□ -0.37
LPCAT3-204ENST00000536797 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
LPCAT3-204ENST00000536797 LINC01600Q96MT4 127 aa12.74□□□□□ -0.37
LPCAT3-204ENST00000536797 LOC105371267A0A1B0GV96 52 aa12.73□□□□□ -0.37
LPCAT3-204ENST00000536797 TIMM17BO60830 172 aa12.73□□□□□ -0.37
LPCAT3-204ENST00000536797 RPL28P46779 137 aaKnown RBP12.73□□□□□ -0.37
LPCAT3-204ENST00000536797 TNXBP22105 4242 aa12.73□□□□□ -0.37
LPCAT3-204ENST00000536797 TMEM126AQ9H061 195 aa12.72□□□□□ -0.37
LPCAT3-204ENST00000536797 NPC2P61916 151 aa12.71□□□□□ -0.37
LPCAT3-204ENST00000536797 LITAFQ99732 161 aa12.71□□□□□ -0.37
LPCAT3-204ENST00000536797 TMEM238C9JI98 176 aa12.71□□□□□ -0.38
LPCAT3-204ENST00000536797 UBE2AP49459 152 aa12.71□□□□□ -0.38
LPCAT3-204ENST00000536797 HSBP1L1C9JCN9 74 aa12.7□□□□□ -0.38
LPCAT3-204ENST00000536797 NDUFC2O95298 119 aa12.7□□□□□ -0.38
LPCAT3-204ENST00000536797 MT1HL1P0DM35 61 aa12.7□□□□□ -0.38
LPCAT3-204ENST00000536797 SCGB1D4Q6XE38 83 aa12.7□□□□□ -0.38
LPCAT3-204ENST00000536797 SOSTDC1Q6X4U4 206 aa12.69□□□□□ -0.38
LPCAT3-204ENST00000536797 SPANXB1Q9NS25 103 aaPredicted RBP12.69□□□□□ -0.38
LPCAT3-204ENST00000536797 TRBV10-2A0A0K0K1G8 114 aa12.68□□□□□ -0.38
LPCAT3-204ENST00000536797 SCGB1D1O95968 90 aa12.68□□□□□ -0.38
LPCAT3-204ENST00000536797 FAM19A1Q7Z5A9 133 aa12.67□□□□□ -0.38
LPCAT3-204ENST00000536797 PCP2Q8IVA1 136 aa12.67□□□□□ -0.38
LPCAT3-204ENST00000536797 PRYO14603 147 aa12.66□□□□□ -0.38
LPCAT3-204ENST00000536797 KRTAP13-1Q8IUC0 172 aa12.66□□□□□ -0.38
LPCAT3-204ENST00000536797 LINC00308Q8TCZ7 52 aa12.66□□□□□ -0.38
LPCAT3-204ENST00000536797 TRBV10-3A0A0K0K1G6 114 aa12.65□□□□□ -0.38
LPCAT3-204ENST00000536797 EIF4EBP3O60516 100 aaPredicted RBP12.65□□□□□ -0.38
LPCAT3-204ENST00000536797 S100A12P80511 92 aa12.65□□□□□ -0.38
LPCAT3-204ENST00000536797 PRLHP81277 87 aa12.64□□□□□ -0.39
LPCAT3-204ENST00000536797 DDTP30046 118 aa12.63□□□□□ -0.39
LPCAT3-204ENST00000536797 KCNQ1DNQ9H478 68 aa12.63□□□□□ -0.39
LPCAT3-204ENST00000536797 S100A7L2Q5SY68 101 aa12.62□□□□□ -0.39
LPCAT3-204ENST00000536797 SPANXDQ9BXN6 97 aa12.62□□□□□ -0.39
LPCAT3-204ENST00000536797 SPANXCQ9NY87 97 aa12.62□□□□□ -0.39
LPCAT3-204ENST00000536797 KRTAP1-4P0C5Y4 121 aa12.62□□□□□ -0.39
LPCAT3-204ENST00000536797 KRTAP10-8P60410 259 aa12.62□□□□□ -0.39
LPCAT3-204ENST00000536797 COPS9Q8WXC6 57 aa12.6□□□□□ -0.39
LPCAT3-204ENST00000536797 SPRR1AP35321 89 aa12.59□□□□□ -0.39
LPCAT3-204ENST00000536797 Q6ZVH6 145 aa12.59□□□□□ -0.39
LPCAT3-204ENST00000536797 LINC00337Q8N6G1 96 aa12.59□□□□□ -0.39
LPCAT3-204ENST00000536797 IGLV6-57P01721 117 aa12.58□□□□□ -0.4
LPCAT3-204ENST00000536797 PRR26Q8N8Z3 221 aa12.58□□□□□ -0.4
LPCAT3-204ENST00000536797 ETDCA0A1B0GVM5 59 aa12.57□□□□□ -0.4
LPCAT3-204ENST00000536797 SMIM6P0DI80 62 aa12.56□□□□□ -0.4
LPCAT3-204ENST00000536797 IFITM1P13164 125 aa12.56□□□□□ -0.4
LPCAT3-204ENST00000536797 JOSD1Q15040 202 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms