RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 HIST1H2BLQ99880 126 aa10.98□□□□□ -0.65
DDX55-204ENST00000536079 MYMXA0A1B0GTQ4 84 aa10.97□□□□□ -0.65
DDX55-204ENST00000536079 E9PLD3 99 aa10.97□□□□□ -0.65
DDX55-204ENST00000536079 IGLV5-37A0A075B6J1 123 aa10.96□□□□□ -0.65
DDX55-204ENST00000536079 IGKV2D-26A0A0A0MRZ7 120 aa10.96□□□□□ -0.65
DDX55-204ENST00000536079 VPREB1P12018 145 aa10.96□□□□□ -0.65
DDX55-204ENST00000536079 HERV-K104P63124 156 aa10.96□□□□□ -0.65
DDX55-204ENST00000536079 UBE2BP63146 152 aa10.96□□□□□ -0.65
DDX55-204ENST00000536079 MEIG1Q5JSS6 88 aa10.96□□□□□ -0.65
DDX55-204ENST00000536079 MRPL55Q7Z7F7 128 aaKnown RBP10.96□□□□□ -0.65
DDX55-204ENST00000536079 LINC00167Q96N53 147 aa10.96□□□□□ -0.65
DDX55-204ENST00000536079 HERC1Q15751 4861 aa10.95□□□□□ -0.66
DDX55-204ENST00000536079 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
DDX55-204ENST00000536079 LGALS3P17931 250 aaKnown RBP10.95□□□□□ -0.66
DDX55-204ENST00000536079 SNRPEP62304 92 aaKnown RBP10.95□□□□□ -0.66
DDX55-204ENST00000536079 ATOH7Q8N100 152 aa10.95□□□□□ -0.66
DDX55-204ENST00000536079 TP73-AS1Q9UF72 201 aa10.95□□□□□ -0.66
DDX55-204ENST00000536079 RPL37AP8A6NKH3 93 aa10.94□□□□□ -0.66
DDX55-204ENST00000536079 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
DDX55-204ENST00000536079 TTTY13Q9BZ97 58 aa10.94□□□□□ -0.66
DDX55-204ENST00000536079 KRTAP29-1A8MX34 341 aaPredicted RBP10.93□□□□□ -0.66
DDX55-204ENST00000536079 S100A6P06703 90 aa10.93□□□□□ -0.66
DDX55-204ENST00000536079 DAND5Q8N907 189 aa10.93□□□□□ -0.66
DDX55-204ENST00000536079 IGLV7-43P04211 117 aa10.92□□□□□ -0.66
DDX55-204ENST00000536079 LBHQ53QV2 105 aaPredicted RBP10.92□□□□□ -0.66
DDX55-204ENST00000536079 S100A2P29034 98 aa10.91□□□□□ -0.66
DDX55-204ENST00000536079 NMUP48645 174 aa10.91□□□□□ -0.66
DDX55-204ENST00000536079 ANKRD39Q53RE8 183 aa10.91□□□□□ -0.66
DDX55-204ENST00000536079 A0A0J9YXY3 114 aa10.9□□□□□ -0.66
DDX55-204ENST00000536079 C5orf52A6NGY3 159 aa10.9□□□□□ -0.66
DDX55-204ENST00000536079 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.66
DDX55-204ENST00000536079 NKAPP1Q8N9T2 125 aa10.9□□□□□ -0.66
DDX55-204ENST00000536079 C20orf202A1L168 122 aa10.89□□□□□ -0.67
DDX55-204ENST00000536079 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
DDX55-204ENST00000536079 EIF4EBP3O60516 100 aaPredicted RBP10.88□□□□□ -0.67
DDX55-204ENST00000536079 IGKV2-28A0A075B6P5 120 aa10.87□□□□□ -0.67
DDX55-204ENST00000536079 OXTP01178 125 aa10.87□□□□□ -0.67
DDX55-204ENST00000536079 IGKV2D-28P01615 120 aa10.87□□□□□ -0.67
DDX55-204ENST00000536079 LINC00587B1AMM8 73 aa10.86□□□□□ -0.67
DDX55-204ENST00000536079 MT1HL1P0DM35 61 aa10.86□□□□□ -0.67
DDX55-204ENST00000536079 RPL24P83731 157 aaKnown RBP10.86□□□□□ -0.67
DDX55-204ENST00000536079 SOSTDC1Q6X4U4 206 aa10.86□□□□□ -0.67
DDX55-204ENST00000536079 BOD1L2Q8IYS8 172 aa10.86□□□□□ -0.67
DDX55-204ENST00000536079 LITAFQ99732 161 aa10.86□□□□□ -0.67
DDX55-204ENST00000536079 IGLV1-50A0A075B6I6 118 aa10.85□□□□□ -0.67
DDX55-204ENST00000536079 J3QL48 77 aa10.85□□□□□ -0.67
DDX55-204ENST00000536079 LOC107984156A0A0G2JMH3 177 aa10.84□□□□□ -0.67
DDX55-204ENST00000536079 ZNF815PA8K554 130 aa10.84□□□□□ -0.67
DDX55-204ENST00000536079 NCR3O14931 201 aa10.84□□□□□ -0.67
DDX55-204ENST00000536079 ARL17AQ8IVW1 177 aa10.84□□□□□ -0.67
DDX55-204ENST00000536079 TNXBP22105 4242 aa10.84□□□□□ -0.67
DDX55-204ENST00000536079 DMBT1Q9UGM3 2413 aaPredicted RBP10.84□□□□□ -0.67
DDX55-204ENST00000536079 TMEM238C9JI98 176 aa10.83□□□□□ -0.68
DDX55-204ENST00000536079 NPC2P61916 151 aa10.83□□□□□ -0.68
DDX55-204ENST00000536079 BCE1O60756 84 aa10.82□□□□□ -0.68
DDX55-204ENST00000536079 PCP2Q8IVA1 136 aa10.82□□□□□ -0.68
DDX55-204ENST00000536079 M0R378 163 aa10.81□□□□□ -0.68
DDX55-204ENST00000536079 H0Y9J4 135 aa10.8□□□□□ -0.68
DDX55-204ENST00000536079 ZNF861PO60384 105 aa10.8□□□□□ -0.68
DDX55-204ENST00000536079 LINC01600Q96MT4 127 aa10.8□□□□□ -0.68
DDX55-204ENST00000536079 KRTAP13-1Q8IUC0 172 aa10.79□□□□□ -0.68
DDX55-204ENST00000536079 DIRC1Q969H9 104 aa10.79□□□□□ -0.68
DDX55-204ENST00000536079 TIMM17BO60830 172 aa10.78□□□□□ -0.68
DDX55-204ENST00000536079 TMEM126AQ9H061 195 aa10.78□□□□□ -0.68
DDX55-204ENST00000536079 REG3GQ6UW15 175 aa10.77□□□□□ -0.69
DDX55-204ENST00000536079 SCGB1D1O95968 90 aa10.76□□□□□ -0.69
DDX55-204ENST00000536079 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
DDX55-204ENST00000536079 AKR1D1P51857 326 aa10.76□□□□□ -0.69
DDX55-204ENST00000536079 LINC00308Q8TCZ7 52 aa10.76□□□□□ -0.69
DDX55-204ENST00000536079 TRBV10-3A0A0K0K1G6 114 aa10.75□□□□□ -0.69
DDX55-204ENST00000536079 KRTAP10-8P60410 259 aa10.74□□□□□ -0.69
DDX55-204ENST00000536079 PRLHP81277 87 aa10.74□□□□□ -0.69
DDX55-204ENST00000536079 UBE2AP49459 152 aa10.73□□□□□ -0.69
DDX55-204ENST00000536079 MIEN1Q9BRT3 115 aa10.73□□□□□ -0.69
DDX55-204ENST00000536079 TMA7Q9Y2S6 64 aaKnown RBP10.73□□□□□ -0.69
DDX55-204ENST00000536079 NDUFC2O95298 119 aa10.72□□□□□ -0.69
DDX55-204ENST00000536079 RPL28P46779 137 aaKnown RBP10.72□□□□□ -0.69
DDX55-204ENST00000536079 SCGB1D4Q6XE38 83 aa10.72□□□□□ -0.69
DDX55-204ENST00000536079 FAM19A1Q7Z5A9 133 aa10.72□□□□□ -0.69
DDX55-204ENST00000536079 KCNQ1DNQ9H478 68 aa10.72□□□□□ -0.69
DDX55-204ENST00000536079 SPANXB1Q9NS25 103 aaPredicted RBP10.72□□□□□ -0.69
DDX55-204ENST00000536079 TRBV10-2A0A0K0K1G8 114 aa10.71□□□□□ -0.69
DDX55-204ENST00000536079 SPRR1AP35321 89 aa10.7□□□□□ -0.7
DDX55-204ENST00000536079 PRR26Q8N8Z3 221 aa10.7□□□□□ -0.7
DDX55-204ENST00000536079 SPANXDQ9BXN6 97 aa10.7□□□□□ -0.7
DDX55-204ENST00000536079 SPANXCQ9NY87 97 aa10.7□□□□□ -0.7
DDX55-204ENST00000536079 HSBP1L1C9JCN9 74 aa10.69□□□□□ -0.7
DDX55-204ENST00000536079 KRTAP4-16G5E9R7 235 aaPredicted RBP10.69□□□□□ -0.7
DDX55-204ENST00000536079 PRYO14603 147 aa10.69□□□□□ -0.7
DDX55-204ENST00000536079 DDTP30046 118 aa10.69□□□□□ -0.7
DDX55-204ENST00000536079 IGLV6-57P01721 117 aa10.68□□□□□ -0.7
DDX55-204ENST00000536079 ANAPC11Q9NYG5 84 aa10.67□□□□□ -0.7
DDX55-204ENST00000536079 JOSD1Q15040 202 aaPredicted RBP10.65□□□□□ -0.7
DDX55-204ENST00000536079 MUSTN1Q8IVN3 82 aa10.65□□□□□ -0.7
DDX55-204ENST00000536079 HMCN2Q8NDA2 5059 aa10.65□□□□□ -0.7
DDX55-204ENST00000536079 S100A7L2Q5SY68 101 aa10.64□□□□□ -0.71
DDX55-204ENST00000536079 LINC00337Q8N6G1 96 aa10.64□□□□□ -0.71
DDX55-204ENST00000536079 A0A087X002 238 aa10.62□□□□□ -0.71
DDX55-204ENST00000536079 B5MCH6 92 aa10.62□□□□□ -0.71
DDX55-204ENST00000536079 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms