RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 LBHQ53QV2 105 aaPredicted RBP13.69□□□□□ -0.22
VPS37C-202ENST00000535818 SPINK6Q6UWN8 80 aa13.69□□□□□ -0.22
VPS37C-202ENST00000535818 J3QQQ9 107 aa13.68□□□□□ -0.22
VPS37C-202ENST00000535818 LGALS3P17931 250 aaKnown RBP13.68□□□□□ -0.22
VPS37C-202ENST00000535818 MEIG1Q5JSS6 88 aa13.68□□□□□ -0.22
VPS37C-202ENST00000535818 KRTAP11-1Q8IUC1 163 aa13.68□□□□□ -0.22
VPS37C-202ENST00000535818 PLA2G2DQ9UNK4 145 aa13.68□□□□□ -0.22
VPS37C-202ENST00000535818 LINC00158P58513 81 aa13.67□□□□□ -0.22
VPS37C-202ENST00000535818 TP73-AS1Q9UF72 201 aa13.67□□□□□ -0.22
VPS37C-202ENST00000535818 MRPL55Q7Z7F7 128 aaKnown RBP13.66□□□□□ -0.22
VPS37C-202ENST00000535818 E9PLD3 99 aa13.65□□□□□ -0.22
VPS37C-202ENST00000535818 NKAPP1Q8N9T2 125 aa13.65□□□□□ -0.22
VPS37C-202ENST00000535818 SRSF9Q13242 221 aaKnown RBP eCLIP13.64□□□□□ -0.23
VPS37C-202ENST00000535818 HIST3H2BBQ8N257 126 aa13.64□□□□□ -0.23
VPS37C-202ENST00000535818 SND1-IT1Q9HBX3 110 aa13.64□□□□□ -0.23
VPS37C-202ENST00000535818 IGLV7-43P04211 117 aa13.63□□□□□ -0.23
VPS37C-202ENST00000535818 RPL24P83731 157 aaKnown RBP13.63□□□□□ -0.23
VPS37C-202ENST00000535818 LRP1Q07954 4544 aaKnown RBP13.62□□□□□ -0.23
VPS37C-202ENST00000535818 A0A0U1RRA0 63 aa13.62□□□□□ -0.23
VPS37C-202ENST00000535818 REG3GQ6UW15 175 aa13.62□□□□□ -0.23
VPS37C-202ENST00000535818 FAT3Q8TDW7 4589 aa13.61□□□□□ -0.23
VPS37C-202ENST00000535818 IGLV5-37A0A075B6J1 123 aa13.61□□□□□ -0.23
VPS37C-202ENST00000535818 TSPEAR-AS2P59090 65 aa13.61□□□□□ -0.23
VPS37C-202ENST00000535818 LINC00167Q96N53 147 aa13.6□□□□□ -0.23
VPS37C-202ENST00000535818 GAGE10A6NGK3 116 aa13.59□□□□□ -0.23
VPS37C-202ENST00000535818 SMIM13P0DJ93 91 aa13.59□□□□□ -0.23
VPS37C-202ENST00000535818 HIST1H2BLQ99880 126 aa13.59□□□□□ -0.23
VPS37C-202ENST00000535818 RPL37AP8A6NKH3 93 aa13.58□□□□□ -0.24
VPS37C-202ENST00000535818 VPREB1P12018 145 aa13.56□□□□□ -0.24
VPS37C-202ENST00000535818 MIR7-3HGQ8N6C7 128 aa13.56□□□□□ -0.24
VPS37C-202ENST00000535818 DIRC1Q969H9 104 aa13.56□□□□□ -0.24
VPS37C-202ENST00000535818 SNRPEP62304 92 aaKnown RBP13.55□□□□□ -0.24
VPS37C-202ENST00000535818 HERC1Q15751 4861 aa13.53□□□□□ -0.24
VPS37C-202ENST00000535818 LINC01600Q96MT4 127 aa13.53□□□□□ -0.24
VPS37C-202ENST00000535818 MIEN1Q9BRT3 115 aa13.53□□□□□ -0.24
VPS37C-202ENST00000535818 MT1HL1P0DM35 61 aa13.52□□□□□ -0.25
VPS37C-202ENST00000535818 IGKV2-28A0A075B6P5 120 aa13.51□□□□□ -0.25
VPS37C-202ENST00000535818 C5orf52A6NGY3 159 aa13.51□□□□□ -0.25
VPS37C-202ENST00000535818 H0Y9J4 135 aa13.51□□□□□ -0.25
VPS37C-202ENST00000535818 IGKV2D-28P01615 120 aa13.51□□□□□ -0.25
VPS37C-202ENST00000535818 BCE1O60756 84 aa13.5□□□□□ -0.25
VPS37C-202ENST00000535818 A0A0J9YXY3 114 aa13.49□□□□□ -0.25
VPS37C-202ENST00000535818 ZNF815PA8K554 130 aa13.49□□□□□ -0.25
VPS37C-202ENST00000535818 HSBP1L1C9JCN9 74 aa13.49□□□□□ -0.25
VPS37C-202ENST00000535818 BOD1L2Q8IYS8 172 aa13.49□□□□□ -0.25
VPS37C-202ENST00000535818 Q8NDZ9 215 aa13.49□□□□□ -0.25
VPS37C-202ENST00000535818 ZNF861PO60384 105 aa13.48□□□□□ -0.25
VPS37C-202ENST00000535818 IGKV2D-26A0A0A0MRZ7 120 aa13.47□□□□□ -0.25
VPS37C-202ENST00000535818 TIMM17BO60830 172 aa13.47□□□□□ -0.25
VPS37C-202ENST00000535818 ATOH7Q8N100 152 aa13.47□□□□□ -0.25
VPS37C-202ENST00000535818 IGLV1-50A0A075B6I6 118 aa13.46□□□□□ -0.25
VPS37C-202ENST00000535818 LOC107984156A0A0G2JMH3 177 aa13.46□□□□□ -0.25
VPS37C-202ENST00000535818 M0R378 163 aa13.46□□□□□ -0.25
VPS37C-202ENST00000535818 RPL28P46779 137 aaKnown RBP13.46□□□□□ -0.25
VPS37C-202ENST00000535818 ARL17AQ8IVW1 177 aa13.46□□□□□ -0.25
VPS37C-202ENST00000535818 DAND5Q8N907 189 aa13.46□□□□□ -0.25
VPS37C-202ENST00000535818 UBE2AP49459 152 aa13.44□□□□□ -0.26
VPS37C-202ENST00000535818 S100A12P80511 92 aa13.44□□□□□ -0.26
VPS37C-202ENST00000535818 NCR3O14931 201 aa13.43□□□□□ -0.26
VPS37C-202ENST00000535818 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
VPS37C-202ENST00000535818 ANKRD39Q53RE8 183 aa13.42□□□□□ -0.26
VPS37C-202ENST00000535818 SCGB1D1O95968 90 aa13.41□□□□□ -0.26
VPS37C-202ENST00000535818 COPS9Q8WXC6 57 aa13.41□□□□□ -0.26
VPS37C-202ENST00000535818 TMEM126AQ9H061 195 aa13.41□□□□□ -0.26
VPS37C-202ENST00000535818 TRBV10-2A0A0K0K1G8 114 aa13.4□□□□□ -0.26
VPS37C-202ENST00000535818 TMEM238C9JI98 176 aa13.4□□□□□ -0.26
VPS37C-202ENST00000535818 NDUFC2O95298 119 aa13.4□□□□□ -0.26
VPS37C-202ENST00000535818 KRTAP10-8P60410 259 aa13.39□□□□□ -0.27
VPS37C-202ENST00000535818 FAM19A1Q7Z5A9 133 aa13.39□□□□□ -0.27
VPS37C-202ENST00000535818 SPANXB1Q9NS25 103 aaPredicted RBP13.39□□□□□ -0.27
VPS37C-202ENST00000535818 TTTY13Q9BZ97 58 aa13.37□□□□□ -0.27
VPS37C-202ENST00000535818 NPC2P61916 151 aa13.36□□□□□ -0.27
VPS37C-202ENST00000535818 ADAMTSL4-AS1Q5T5F5 129 aa13.36□□□□□ -0.27
VPS37C-202ENST00000535818 PRYO14603 147 aa13.35□□□□□ -0.27
VPS37C-202ENST00000535818 KRTAP1-4P0C5Y4 121 aa13.35□□□□□ -0.27
VPS37C-202ENST00000535818 PRLHP81277 87 aa13.35□□□□□ -0.27
VPS37C-202ENST00000535818 Q6ZVH6 145 aa13.35□□□□□ -0.27
VPS37C-202ENST00000535818 PRR26Q8N8Z3 221 aa13.35□□□□□ -0.27
VPS37C-202ENST00000535818 LITAFQ99732 161 aa13.35□□□□□ -0.27
VPS37C-202ENST00000535818 CBY1Q9Y3M2 126 aa13.35□□□□□ -0.27
VPS37C-202ENST00000535818 KRTAP13-1Q8IUC0 172 aa13.34□□□□□ -0.27
VPS37C-202ENST00000535818 LINC00308Q8TCZ7 52 aa13.34□□□□□ -0.27
VPS37C-202ENST00000535818 SPANXDQ9BXN6 97 aa13.34□□□□□ -0.27
VPS37C-202ENST00000535818 SPANXCQ9NY87 97 aa13.34□□□□□ -0.27
VPS37C-202ENST00000535818 S100A7L2Q5SY68 101 aa13.32□□□□□ -0.28
VPS37C-202ENST00000535818 PCP2Q8IVA1 136 aa13.32□□□□□ -0.28
VPS37C-202ENST00000535818 TRBV10-3A0A0K0K1G6 114 aa13.31□□□□□ -0.28
VPS37C-202ENST00000535818 IFITM1P13164 125 aa13.31□□□□□ -0.28
VPS37C-202ENST00000535818 DDTP30046 118 aa13.31□□□□□ -0.28
VPS37C-202ENST00000535818 TNXBP22105 4242 aa13.3□□□□□ -0.28
VPS37C-202ENST00000535818 SOSTDC1Q6X4U4 206 aa13.3□□□□□ -0.28
VPS37C-202ENST00000535818 PPDPFQ9H3Y8 114 aa13.3□□□□□ -0.28
VPS37C-202ENST00000535818 KCNQ1DNQ9H478 68 aa13.3□□□□□ -0.28
VPS37C-202ENST00000535818 RPL13AP40429 203 aaKnown RBP13.28□□□□□ -0.28
VPS37C-202ENST00000535818 LINC00518Q8N0U6 118 aa13.28□□□□□ -0.28
VPS37C-202ENST00000535818 TMA7Q9Y2S6 64 aaKnown RBP13.28□□□□□ -0.28
VPS37C-202ENST00000535818 ETDCA0A1B0GVM5 59 aa13.26□□□□□ -0.29
VPS37C-202ENST00000535818 EIF4EBP3O60516 100 aaPredicted RBP13.26□□□□□ -0.29
VPS37C-202ENST00000535818 LINC00337Q8N6G1 96 aa13.26□□□□□ -0.29
VPS37C-202ENST00000535818 HIGD2AQ9BW72 106 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms