RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.18
CHD4-203ENST00000535717 IGLV5-39A0A0G2JS06 123 aa7.7□□□□□ -1.18
CHD4-203ENST00000535717 CIRBPQ14011 172 aaKnown RBP7.7□□□□□ -1.18
CHD4-203ENST00000535717 SCXQ7RTU7 201 aa7.7□□□□□ -1.18
CHD4-203ENST00000535717 COX7B2Q8TF08 81 aa7.7□□□□□ -1.18
CHD4-203ENST00000535717 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
CHD4-203ENST00000535717 C6orf48Q9UBA6 75 aa7.7□□□□□ -1.18
CHD4-203ENST00000535717 PRO0461Q9UI25 63 aa7.7□□□□□ -1.18
CHD4-203ENST00000535717 A0A096LNI7 61 aa7.69□□□□□ -1.18
CHD4-203ENST00000535717 LOC107984640A0A0U1RRK4 108 aa7.69□□□□□ -1.18
CHD4-203ENST00000535717 H3BMG7 143 aa7.69□□□□□ -1.18
CHD4-203ENST00000535717 DPM2O94777 84 aa7.69□□□□□ -1.18
CHD4-203ENST00000535717 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
CHD4-203ENST00000535717 TRBV30A0A0K0K1B3 111 aa7.68□□□□□ -1.18
CHD4-203ENST00000535717 TMEM223A0PJW6 202 aa7.68□□□□□ -1.18
CHD4-203ENST00000535717 M0QXV9 152 aa7.68□□□□□ -1.18
CHD4-203ENST00000535717 IGKCP01834 107 aa7.68□□□□□ -1.18
CHD4-203ENST00000535717 RPL24P83731 157 aaKnown RBP7.68□□□□□ -1.18
CHD4-203ENST00000535717 CEND1Q8N111 149 aa7.68□□□□□ -1.18
CHD4-203ENST00000535717 CIRBP-AS1Q8TBR5 109 aa7.68□□□□□ -1.18
CHD4-203ENST00000535717 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
CHD4-203ENST00000535717 PKIGQ9Y2B9 76 aa7.68□□□□□ -1.18
CHD4-203ENST00000535717 PLNP26678 52 aa7.67□□□□□ -1.18
CHD4-203ENST00000535717 FXYD2P54710 66 aa7.67□□□□□ -1.18
CHD4-203ENST00000535717 C9orf116Q5BN46 136 aaPredicted RBP7.67□□□□□ -1.18
CHD4-203ENST00000535717 LYRM7Q5U5X0 104 aa7.67□□□□□ -1.18
CHD4-203ENST00000535717 SMR3BP02814 79 aaPredicted RBP7.66□□□□□ -1.18
CHD4-203ENST00000535717 CXCL5P42830 114 aa7.66□□□□□ -1.18
CHD4-203ENST00000535717 RPL18AQ02543 176 aaKnown RBP7.66□□□□□ -1.18
CHD4-203ENST00000535717 GAGE2BQ13066 116 aa7.66□□□□□ -1.18
CHD4-203ENST00000535717 DPH3Q96FX2 82 aa7.66□□□□□ -1.18
CHD4-203ENST00000535717 ERG28Q9UKR5 140 aa7.66□□□□□ -1.18
CHD4-203ENST00000535717 FAT1Q14517 4588 aa7.66□□□□□ -1.18
CHD4-203ENST00000535717 A0A087WYN8 130 aa7.65□□□□□ -1.18
CHD4-203ENST00000535717 LCE2BO14633 110 aa7.65□□□□□ -1.18
CHD4-203ENST00000535717 TLX1NBP0CAT3 122 aa7.65□□□□□ -1.18
CHD4-203ENST00000535717 Q6ZRP5 223 aa7.65□□□□□ -1.18
CHD4-203ENST00000535717 Q8N1X5 172 aa7.64□□□□□ -1.19
CHD4-203ENST00000535717 RAB37Q96AX2 223 aa7.64□□□□□ -1.19
CHD4-203ENST00000535717 LINC00474Q9P2X8 69 aa7.64□□□□□ -1.19
CHD4-203ENST00000535717 SRRM2Q9UQ35 2752 aaKnown RBP7.64□□□□□ -1.19
CHD4-203ENST00000535717 NDUFC2-KCTD14E9PQ53 114 aa7.63□□□□□ -1.19
CHD4-203ENST00000535717 PCP2Q8IVA1 136 aa7.63□□□□□ -1.19
CHD4-203ENST00000535717 LINC01600Q96MT4 127 aa7.63□□□□□ -1.19
CHD4-203ENST00000535717 CDIP1Q9H305 208 aa7.63□□□□□ -1.19
CHD4-203ENST00000535717 PLAC8Q9NZF1 115 aa7.63□□□□□ -1.19
CHD4-203ENST00000535717 VPS13BQ7Z7G8 4022 aa7.63□□□□□ -1.19
CHD4-203ENST00000535717 NMUP48645 174 aa7.62□□□□□ -1.19
CHD4-203ENST00000535717 GAGE2EQ4V326 116 aa7.62□□□□□ -1.19
CHD4-203ENST00000535717 Q6Q795 121 aa7.62□□□□□ -1.19
CHD4-203ENST00000535717 ZNF625Q96I27 306 aaPredicted RBP7.62□□□□□ -1.19
CHD4-203ENST00000535717 GAGE2DQ9UEU5 116 aa7.62□□□□□ -1.19
CHD4-203ENST00000535717 PPDPFLQ8WWR9 84 aa7.61□□□□□ -1.19
CHD4-203ENST00000535717 A0A1W2PNN7 141 aa7.6□□□□□ -1.19
CHD4-203ENST00000535717 LEPROTO15243 131 aa7.6□□□□□ -1.19
CHD4-203ENST00000535717 TSPEAR-AS2P59090 65 aa7.6□□□□□ -1.19
CHD4-203ENST00000535717 HERVK_113P61574 105 aa7.6□□□□□ -1.19
CHD4-203ENST00000535717 ETDBQ3ZM63 59 aa7.6□□□□□ -1.19
CHD4-203ENST00000535717 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
CHD4-203ENST00000535717 NAA38Q9BRA0 125 aaKnown RBP7.6□□□□□ -1.19
CHD4-203ENST00000535717 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
CHD4-203ENST00000535717 NHP2Q9NX24 153 aaKnown RBP7.6□□□□□ -1.19
CHD4-203ENST00000535717 EPM2AB3EWF7 344 aa7.59□□□□□ -1.19
CHD4-203ENST00000535717 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
CHD4-203ENST00000535717 Q5VSD8 79 aa7.59□□□□□ -1.19
CHD4-203ENST00000535717 SFTA2Q6UW10 78 aa7.59□□□□□ -1.19
CHD4-203ENST00000535717 TRBV20-1A0A075B6N2 111 aa7.58□□□□□ -1.2
CHD4-203ENST00000535717 IGKV2D-26A0A0A0MRZ7 120 aa7.58□□□□□ -1.2
CHD4-203ENST00000535717 FAM168BA1KXE4 195 aa7.58□□□□□ -1.2
CHD4-203ENST00000535717 FAM229AH3BQW9 127 aa7.58□□□□□ -1.2
CHD4-203ENST00000535717 TEN1Q86WV5 123 aa7.58□□□□□ -1.2
CHD4-203ENST00000535717 PLEKHB2Q96CS7 222 aa7.58□□□□□ -1.2
CHD4-203ENST00000535717 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
CHD4-203ENST00000535717 J3QQQ9 107 aa7.57□□□□□ -1.2
CHD4-203ENST00000535717 K7ERJ3 54 aa7.57□□□□□ -1.2
CHD4-203ENST00000535717 PFN2P35080 140 aa7.57□□□□□ -1.2
CHD4-203ENST00000535717 KRTAP7-1Q8IUC3 87 aa7.57□□□□□ -1.2
CHD4-203ENST00000535717 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
CHD4-203ENST00000535717 COX17Q14061 63 aa7.56□□□□□ -1.2
CHD4-203ENST00000535717 MYMXA0A1B0GTQ4 84 aa7.55□□□□□ -1.2
CHD4-203ENST00000535717 LGALS3P17931 250 aaKnown RBP7.55□□□□□ -1.2
CHD4-203ENST00000535717 HERV-K104P63124 156 aa7.55□□□□□ -1.2
CHD4-203ENST00000535717 FAM19A5Q7Z5A7 132 aaPredicted RBP7.55□□□□□ -1.2
CHD4-203ENST00000535717 SPANXDQ9BXN6 97 aa7.55□□□□□ -1.2
CHD4-203ENST00000535717 ABCA13Q86UQ4 5058 aa7.55□□□□□ -1.2
CHD4-203ENST00000535717 SMCPP49901 116 aaPredicted RBP7.54□□□□□ -1.2
CHD4-203ENST00000535717 KRTAP10-4P60372 401 aaPredicted RBP7.54□□□□□ -1.2
CHD4-203ENST00000535717 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
CHD4-203ENST00000535717 A0A0U1RRA0 63 aa7.53□□□□□ -1.2
CHD4-203ENST00000535717 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
CHD4-203ENST00000535717 LINC00158P58513 81 aa7.53□□□□□ -1.2
CHD4-203ENST00000535717 RPL37AP61513 92 aaKnown RBP7.53□□□□□ -1.2
CHD4-203ENST00000535717 PHF5AQ7RTV0 110 aaKnown RBP7.53□□□□□ -1.2
CHD4-203ENST00000535717 C7orf33Q8WU49 177 aa7.53□□□□□ -1.2
CHD4-203ENST00000535717 ANAPC13Q9BS18 74 aa7.53□□□□□ -1.2
CHD4-203ENST00000535717 SND1-IT1Q9HBX3 110 aa7.53□□□□□ -1.2
CHD4-203ENST00000535717 MT-ATP8P03928 68 aa7.52□□□□□ -1.21
CHD4-203ENST00000535717 MEIG1Q5JSS6 88 aa7.52□□□□□ -1.21
CHD4-203ENST00000535717 HIST1H4GQ99525 98 aa7.52□□□□□ -1.21
CHD4-203ENST00000535717 PLA2G2DQ9UNK4 145 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms