RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 XAGE1AQ9HD64 81 aa5.42□□□□□ -1.54
COPB1-210ENST00000533533 IGLV5-39A0A0G2JS06 123 aa5.41□□□□□ -1.54
COPB1-210ENST00000533533 PFN2P35080 140 aa5.41□□□□□ -1.54
COPB1-210ENST00000533533 PRR3P79522 188 aaKnown RBP5.41□□□□□ -1.54
COPB1-210ENST00000533533 PHF5AQ7RTV0 110 aaKnown RBP5.41□□□□□ -1.54
COPB1-210ENST00000533533 TMEM223A0PJW6 202 aa5.4□□□□□ -1.54
COPB1-210ENST00000533533 DPM2O94777 84 aa5.4□□□□□ -1.54
COPB1-210ENST00000533533 C9orf129Q5T035 196 aaKnown RBP5.4□□□□□ -1.54
COPB1-210ENST00000533533 M0QXV9 152 aa5.39□□□□□ -1.55
COPB1-210ENST00000533533 IGKCP01834 107 aa5.39□□□□□ -1.55
COPB1-210ENST00000533533 PLNP26678 52 aa5.39□□□□□ -1.55
COPB1-210ENST00000533533 KRTAP10-8P60410 259 aa5.39□□□□□ -1.55
COPB1-210ENST00000533533 HERVK_113P61574 105 aa5.39□□□□□ -1.55
COPB1-210ENST00000533533 UBE2BP63146 152 aa5.39□□□□□ -1.55
COPB1-210ENST00000533533 A0A0U1RRA0 63 aa5.38□□□□□ -1.55
COPB1-210ENST00000533533 REG3GQ6UW15 175 aa5.38□□□□□ -1.55
COPB1-210ENST00000533533 SPINK6Q6UWN8 80 aa5.38□□□□□ -1.55
COPB1-210ENST00000533533 ERG28Q9UKR5 140 aa5.38□□□□□ -1.55
COPB1-210ENST00000533533 SYS1-DBNDD2H3BUS1 97 aa5.37□□□□□ -1.55
COPB1-210ENST00000533533 LINC00158P58513 81 aa5.37□□□□□ -1.55
COPB1-210ENST00000533533 KRTDAPP60985 99 aa5.37□□□□□ -1.55
COPB1-210ENST00000533533 MEIG1Q5JSS6 88 aa5.37□□□□□ -1.55
COPB1-210ENST00000533533 SFTA2Q6UW10 78 aa5.37□□□□□ -1.55
COPB1-210ENST00000533533 SRSF9Q13242 221 aaKnown RBP eCLIP5.36□□□□□ -1.552e-11■■■■□ 22.3
COPB1-210ENST00000533533 C1orf137Q5JT78 98 aa5.36□□□□□ -1.55
COPB1-210ENST00000533533 NDUFA12Q9UI09 145 aa5.36□□□□□ -1.55
COPB1-210ENST00000533533 PSORS1C2Q9UIG4 136 aa5.36□□□□□ -1.55
COPB1-210ENST00000533533 C22orf24Q9Y442 160 aa5.36□□□□□ -1.55
COPB1-210ENST00000533533 MYMXA0A1B0GTQ4 84 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 GAGE10A6NGK3 116 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 LEPROTO15243 131 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 S100A6P06703 90 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 C3orf79P0CE67 100 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 LGALS3P17931 250 aaKnown RBP5.35□□□□□ -1.55
COPB1-210ENST00000533533 S100A2P29034 98 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 LBHQ53QV2 105 aaPredicted RBP5.35□□□□□ -1.55
COPB1-210ENST00000533533 COA6Q5JTJ3 125 aaKnown RBP5.35□□□□□ -1.55
COPB1-210ENST00000533533 PET117Q6UWS5 81 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 KRTAP7-1Q8IUC3 87 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 NKAPP1Q8N9T2 125 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 PLEKHB2Q96CS7 222 aa5.35□□□□□ -1.55
COPB1-210ENST00000533533 J3QQQ9 107 aa5.34□□□□□ -1.55
COPB1-210ENST00000533533 SMIM13P0DJ93 91 aa5.34□□□□□ -1.55
COPB1-210ENST00000533533 TSPEAR-AS2P59090 65 aa5.34□□□□□ -1.55
COPB1-210ENST00000533533 HERV-K104P63124 156 aa5.34□□□□□ -1.55
COPB1-210ENST00000533533 COX17Q14061 63 aa5.34□□□□□ -1.55
COPB1-210ENST00000533533 SND1-IT1Q9HBX3 110 aa5.34□□□□□ -1.55
COPB1-210ENST00000533533 C20orf202A1L168 122 aa5.33□□□□□ -1.56
COPB1-210ENST00000533533 RPL37AP8A6NKH3 93 aa5.33□□□□□ -1.56
COPB1-210ENST00000533533 LINC01545Q5VT33 79 aa5.33□□□□□ -1.56
COPB1-210ENST00000533533 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
COPB1-210ENST00000533533 KRTAP11-1Q8IUC1 163 aa5.33□□□□□ -1.56
COPB1-210ENST00000533533 LPAP08519 4548 aa5.32□□□□□ -1.56
COPB1-210ENST00000533533 LINC00587B1AMM8 73 aa5.32□□□□□ -1.56
COPB1-210ENST00000533533 RPL24P83731 157 aaKnown RBP5.32□□□□□ -1.56
COPB1-210ENST00000533533 MIR7-3HGQ8N6C7 128 aa5.32□□□□□ -1.56
COPB1-210ENST00000533533 E9PLD3 99 aa5.31□□□□□ -1.56
COPB1-210ENST00000533533 NMUP48645 174 aa5.31□□□□□ -1.56
COPB1-210ENST00000533533 ATOH7Q8N100 152 aa5.31□□□□□ -1.56
COPB1-210ENST00000533533 LINC00167Q96N53 147 aa5.31□□□□□ -1.56
COPB1-210ENST00000533533 TP73-AS1Q9UF72 201 aa5.31□□□□□ -1.56
COPB1-210ENST00000533533 IGKV2-28A0A075B6P5 120 aa5.3□□□□□ -1.56
COPB1-210ENST00000533533 IGKV2D-28P01615 120 aa5.3□□□□□ -1.56
COPB1-210ENST00000533533 IGLV7-43P04211 117 aa5.3□□□□□ -1.56
COPB1-210ENST00000533533 BOD1L2Q8IYS8 172 aa5.3□□□□□ -1.56
COPB1-210ENST00000533533 HIST3H2BBQ8N257 126 aa5.3□□□□□ -1.56
COPB1-210ENST00000533533 DAND5Q8N907 189 aa5.3□□□□□ -1.56
COPB1-210ENST00000533533 VPREB1P12018 145 aa5.29□□□□□ -1.56
COPB1-210ENST00000533533 NPC2P61916 151 aa5.29□□□□□ -1.56
COPB1-210ENST00000533533 SNRPEP62304 92 aaKnown RBP5.29□□□□□ -1.56
COPB1-210ENST00000533533 HIST1H2BLQ99880 126 aa5.29□□□□□ -1.56
COPB1-210ENST00000533533 MIEN1Q9BRT3 115 aa5.29□□□□□ -1.56
COPB1-210ENST00000533533 IGLV5-37A0A075B6J1 123 aa5.28□□□□□ -1.56
COPB1-210ENST00000533533 ZNF815PA8K554 130 aa5.28□□□□□ -1.56
COPB1-210ENST00000533533 NCR3O14931 201 aa5.28□□□□□ -1.56
COPB1-210ENST00000533533 DIRC1Q969H9 104 aa5.28□□□□□ -1.56
COPB1-210ENST00000533533 IGKV2D-26A0A0A0MRZ7 120 aa5.27□□□□□ -1.57
COPB1-210ENST00000533533 A0A0J9YXY3 114 aa5.27□□□□□ -1.57
COPB1-210ENST00000533533 UBE2AP49459 152 aa5.27□□□□□ -1.57
COPB1-210ENST00000533533 Q8NDZ9 215 aa5.27□□□□□ -1.57
COPB1-210ENST00000533533 M0R378 163 aa5.26□□□□□ -1.57
COPB1-210ENST00000533533 BCE1O60756 84 aa5.26□□□□□ -1.57
COPB1-210ENST00000533533 AKR1D1P51857 326 aa5.26□□□□□ -1.57
COPB1-210ENST00000533533 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
COPB1-210ENST00000533533 TTTY13Q9BZ97 58 aa5.26□□□□□ -1.57
COPB1-210ENST00000533533 MUC2Q02817 5179 aa5.26□□□□□ -1.57
COPB1-210ENST00000533533 HSBP1L1C9JCN9 74 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 TMEM238C9JI98 176 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 H0Y9J4 135 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 ZNF861PO60384 105 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 SCGB1D1O95968 90 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 RPL28P46779 137 aaKnown RBP5.25□□□□□ -1.57
COPB1-210ENST00000533533 ANKRD39Q53RE8 183 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 SCGB1D4Q6XE38 83 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 FAM19A1Q7Z5A9 133 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 PRR26Q8N8Z3 221 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
COPB1-210ENST00000533533 IGLV1-50A0A075B6I6 118 aa5.24□□□□□ -1.57
COPB1-210ENST00000533533 S100A12P80511 92 aa5.24□□□□□ -1.57
COPB1-210ENST00000533533 ADAMTSL4-AS1Q5T5F5 129 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms