RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
CMTM1-216ENST00000533078 ZNF706Q9Y5V0 76 aaPredicted RBP6.61□□□□□ -1.35
CMTM1-216ENST00000533078 C5orf52A6NGY3 159 aa6.6□□□□□ -1.35
CMTM1-216ENST00000533078 SPINK8P0C7L1 97 aa6.6□□□□□ -1.35
CMTM1-216ENST00000533078 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
CMTM1-216ENST00000533078 PLEKHB2Q96CS7 222 aa6.6□□□□□ -1.35
CMTM1-216ENST00000533078 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
CMTM1-216ENST00000533078 IGLV5-45A0A087WSX0 123 aa6.59□□□□□ -1.35
CMTM1-216ENST00000533078 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
CMTM1-216ENST00000533078 ASB16-AS1Q495Z4 193 aa6.59□□□□□ -1.35
CMTM1-216ENST00000533078 S100A6P06703 90 aa6.58□□□□□ -1.36
CMTM1-216ENST00000533078 LCE2DQ5TA82 110 aaPredicted RBP6.58□□□□□ -1.36
CMTM1-216ENST00000533078 M0R378 163 aa6.57□□□□□ -1.36
CMTM1-216ENST00000533078 VPREB1P12018 145 aa6.57□□□□□ -1.36
CMTM1-216ENST00000533078 COX17Q14061 63 aa6.57□□□□□ -1.36
CMTM1-216ENST00000533078 PMVKQ15126 192 aa6.57□□□□□ -1.36
CMTM1-216ENST00000533078 COX19Q49B96 90 aa6.57□□□□□ -1.36
CMTM1-216ENST00000533078 CST9LQ9H4G1 147 aa6.57□□□□□ -1.36
CMTM1-216ENST00000533078 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
CMTM1-216ENST00000533078 SPINK1P00995 79 aa6.56□□□□□ -1.36
CMTM1-216ENST00000533078 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
CMTM1-216ENST00000533078 SFTA2Q6UW10 78 aa6.56□□□□□ -1.36
CMTM1-216ENST00000533078 FAM19A2Q8N3H0 131 aa6.56□□□□□ -1.36
CMTM1-216ENST00000533078 SPRR4Q96PI1 79 aa6.56□□□□□ -1.36
CMTM1-216ENST00000533078 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
CMTM1-216ENST00000533078 ERG28Q9UKR5 140 aa6.56□□□□□ -1.36
CMTM1-216ENST00000533078 SNRPEP62304 92 aaKnown RBP6.55□□□□□ -1.36
CMTM1-216ENST00000533078 COA6Q5JTJ3 125 aaKnown RBP6.55□□□□□ -1.36
CMTM1-216ENST00000533078 DAND5Q8N907 189 aa6.55□□□□□ -1.36
CMTM1-216ENST00000533078 Q8NBF4 154 aa6.55□□□□□ -1.36
CMTM1-216ENST00000533078 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 TRGC2P03986 189 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
CMTM1-216ENST00000533078 LINC00518Q8N0U6 118 aa6.53□□□□□ -1.36
CMTM1-216ENST00000533078 NDUFA6P56556 154 aa6.52□□□□□ -1.37
CMTM1-216ENST00000533078 FABP9Q0Z7S8 132 aa6.52□□□□□ -1.37
CMTM1-216ENST00000533078 KIAA1644Q3SXP7 199 aa6.52□□□□□ -1.37
CMTM1-216ENST00000533078 FA2HQ7L5A8 372 aa6.52□□□□□ -1.37
CMTM1-216ENST00000533078 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
CMTM1-216ENST00000533078 SMIM6P0DI80 62 aa6.51□□□□□ -1.37
CMTM1-216ENST00000533078 S100A12P80511 92 aa6.51□□□□□ -1.37
CMTM1-216ENST00000533078 ZNF625Q96I27 306 aaPredicted RBP6.51□□□□□ -1.37
CMTM1-216ENST00000533078 ETDCA0A1B0GVM5 59 aa6.5□□□□□ -1.37
CMTM1-216ENST00000533078 IGLC3P0DOY3 106 aa6.5□□□□□ -1.37
CMTM1-216ENST00000533078 LINC00158P58513 81 aa6.5□□□□□ -1.37
CMTM1-216ENST00000533078 TRAPPC1Q9Y5R8 145 aa6.5□□□□□ -1.37
CMTM1-216ENST00000533078 PRYO14603 147 aa6.49□□□□□ -1.37
CMTM1-216ENST00000533078 SLC25A20O43772 301 aa6.48□□□□□ -1.37
CMTM1-216ENST00000533078 ZNF22P17026 224 aaPredicted RBP6.48□□□□□ -1.37
CMTM1-216ENST00000533078 AKR1D1P51857 326 aa6.48□□□□□ -1.37
CMTM1-216ENST00000533078 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
CMTM1-216ENST00000533078 HIST3H2BBQ8N257 126 aa6.48□□□□□ -1.37
CMTM1-216ENST00000533078 LINC01546A6NGU7 62 aa6.47□□□□□ -1.37
CMTM1-216ENST00000533078 S100A2P29034 98 aa6.47□□□□□ -1.37
CMTM1-216ENST00000533078 TMEM170BQ5T4T1 132 aa6.47□□□□□ -1.37
CMTM1-216ENST00000533078 MOBPQ13875 183 aa6.46□□□□□ -1.38
CMTM1-216ENST00000533078 Q8NDZ9 215 aa6.46□□□□□ -1.38
CMTM1-216ENST00000533078 SMCR5Q8TEV8 140 aa6.46□□□□□ -1.38
CMTM1-216ENST00000533078 KRTAP4-1Q9BYQ7 146 aa6.46□□□□□ -1.38
CMTM1-216ENST00000533078 IGLV9-49A0A0B4J1Y8 123 aa6.45□□□□□ -1.38
CMTM1-216ENST00000533078 CFC1BP0CG36 223 aa6.45□□□□□ -1.38
CMTM1-216ENST00000533078 GAGE2AQ6NT46 116 aa6.45□□□□□ -1.38
CMTM1-216ENST00000533078 SSBP3-AS1Q7Z2R9 100 aa6.45□□□□□ -1.38
CMTM1-216ENST00000533078 BOD1L2Q8IYS8 172 aa6.45□□□□□ -1.38
CMTM1-216ENST00000533078 C12orf57Q99622 126 aa6.45□□□□□ -1.38
CMTM1-216ENST00000533078 A0A0U1RRA0 63 aa6.44□□□□□ -1.38
CMTM1-216ENST00000533078 LINC00483Q53H64 154 aa6.44□□□□□ -1.38
CMTM1-216ENST00000533078 XP32Q5T750 250 aa6.44□□□□□ -1.38
CMTM1-216ENST00000533078 Q8N377 158 aa6.44□□□□□ -1.38
CMTM1-216ENST00000533078 HIST1H2BLQ99880 126 aa6.44□□□□□ -1.38
CMTM1-216ENST00000533078 NCR3O14931 201 aa6.43□□□□□ -1.38
CMTM1-216ENST00000533078 MEIG1Q5JSS6 88 aa6.43□□□□□ -1.38
CMTM1-216ENST00000533078 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
CMTM1-216ENST00000533078 LINC00587B1AMM8 73 aa6.42□□□□□ -1.38
CMTM1-216ENST00000533078 HBDP02042 147 aa6.42□□□□□ -1.38
CMTM1-216ENST00000533078 SPRR1AP35321 89 aa6.42□□□□□ -1.38
CMTM1-216ENST00000533078 BAGE3Q86Y29 109 aa6.42□□□□□ -1.38
CMTM1-216ENST00000533078 C11orf86A6NJI1 115 aa6.41□□□□□ -1.38
CMTM1-216ENST00000533078 C9orf153Q5TBE3 101 aa6.41□□□□□ -1.38
CMTM1-216ENST00000533078 SMIM13P0DJ93 91 aa6.4□□□□□ -1.38
CMTM1-216ENST00000533078 FABP4P15090 132 aa6.4□□□□□ -1.38
CMTM1-216ENST00000533078 JOSD1Q15040 202 aaPredicted RBP6.4□□□□□ -1.38
CMTM1-216ENST00000533078 MAP1LC3CQ9BXW4 147 aa6.4□□□□□ -1.38
CMTM1-216ENST00000533078 PYY3Q5JQD4 70 aa6.39□□□□□ -1.39
CMTM1-216ENST00000533078 TRBV10-3A0A0K0K1G6 114 aa6.38□□□□□ -1.39
CMTM1-216ENST00000533078 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
CMTM1-216ENST00000533078 LINC00614P0C842 121 aa6.38□□□□□ -1.39
CMTM1-216ENST00000533078 HERV-K104P63124 156 aa6.38□□□□□ -1.39
CMTM1-216ENST00000533078 MIR7-3HGQ8N6C7 128 aa6.38□□□□□ -1.39
CMTM1-216ENST00000533078 CHTOPQ9Y3Y2 248 aaKnown RBP6.38□□□□□ -1.39
CMTM1-216ENST00000533078 IGLV8-61A0A075B6I0 122 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms