RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 C21orf62-AS1Q17RA5 79 aa8.16□□□□□ -1.1
TRAPPC4-212ENST00000533058 HSBP1L1C9JCN9 74 aa8.15□□□□□ -1.1
TRAPPC4-212ENST00000533058 NMUP48645 174 aa8.15□□□□□ -1.1
TRAPPC4-212ENST00000533058 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.1
TRAPPC4-212ENST00000533058 COX17Q14061 63 aa8.14□□□□□ -1.11
TRAPPC4-212ENST00000533058 FAM19A5Q7Z5A7 132 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC4-212ENST00000533058 LINC00587B1AMM8 73 aa8.13□□□□□ -1.11
TRAPPC4-212ENST00000533058 OXTP01178 125 aa8.13□□□□□ -1.11
TRAPPC4-212ENST00000533058 SMIM13P0DJ93 91 aa8.13□□□□□ -1.11
TRAPPC4-212ENST00000533058 IGKV2D-26A0A0A0MRZ7 120 aa8.12□□□□□ -1.11
TRAPPC4-212ENST00000533058 A0A1W2PNN7 141 aa8.12□□□□□ -1.11
TRAPPC4-212ENST00000533058 FAM168BA1KXE4 195 aa8.12□□□□□ -1.11
TRAPPC4-212ENST00000533058 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
TRAPPC4-212ENST00000533058 ANKRD39Q53RE8 183 aa8.12□□□□□ -1.11
TRAPPC4-212ENST00000533058 C9orf129Q5T035 196 aaKnown RBP8.12□□□□□ -1.11
TRAPPC4-212ENST00000533058 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC4-212ENST00000533058 C7orf33Q8WU49 177 aa8.11□□□□□ -1.11
TRAPPC4-212ENST00000533058 HNRNPA3P51991 378 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-212ENST00000533058 TTTY13Q9BZ97 58 aa8.1□□□□□ -1.11
TRAPPC4-212ENST00000533058 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
TRAPPC4-212ENST00000533058 MIR7-3HGQ8N6C7 128 aa8.09□□□□□ -1.11
TRAPPC4-212ENST00000533058 A0A0J9YXY3 114 aa8.08□□□□□ -1.12
TRAPPC4-212ENST00000533058 M0QXV9 152 aa8.08□□□□□ -1.12
TRAPPC4-212ENST00000533058 SCGB1D4Q6XE38 83 aa8.08□□□□□ -1.12
TRAPPC4-212ENST00000533058 PHF5AQ7RTV0 110 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-212ENST00000533058 NKAPP1Q8N9T2 125 aa8.08□□□□□ -1.12
TRAPPC4-212ENST00000533058 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
TRAPPC4-212ENST00000533058 SERTAD4-AS1Q5TG53 156 aa8.07□□□□□ -1.12
TRAPPC4-212ENST00000533058 DAND5Q8N907 189 aa8.07□□□□□ -1.12
TRAPPC4-212ENST00000533058 PKHD1L1Q86WI1 4243 aa8.07□□□□□ -1.12
TRAPPC4-212ENST00000533058 UBE2BP63146 152 aa8.06□□□□□ -1.12
TRAPPC4-212ENST00000533058 JOSD1Q15040 202 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC4-212ENST00000533058 PCP2Q8IVA1 136 aa8.06□□□□□ -1.12
TRAPPC4-212ENST00000533058 MIEN1Q9BRT3 115 aa8.06□□□□□ -1.12
TRAPPC4-212ENST00000533058 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
TRAPPC4-212ENST00000533058 PRR3P79522 188 aaKnown RBP8.05□□□□□ -1.12
TRAPPC4-212ENST00000533058 RPL24P83731 157 aaKnown RBP8.05□□□□□ -1.12
TRAPPC4-212ENST00000533058 LBHQ53QV2 105 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC4-212ENST00000533058 BOD1L2Q8IYS8 172 aa8.05□□□□□ -1.12
TRAPPC4-212ENST00000533058 VAMP8Q9BV40 100 aa8.05□□□□□ -1.12
TRAPPC4-212ENST00000533058 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
TRAPPC4-212ENST00000533058 NPC2P61916 151 aa8.04□□□□□ -1.12
TRAPPC4-212ENST00000533058 PLA2G2DQ9UNK4 145 aa8.04□□□□□ -1.12
TRAPPC4-212ENST00000533058 PAM16Q9Y3D7 125 aa8.04□□□□□ -1.12
TRAPPC4-212ENST00000533058 GAGE10A6NGK3 116 aa8.03□□□□□ -1.12
TRAPPC4-212ENST00000533058 TIMM17BO60830 172 aa8.03□□□□□ -1.12
TRAPPC4-212ENST00000533058 SPATA45Q537H7 98 aa8.03□□□□□ -1.12
TRAPPC4-212ENST00000533058 MRPL55Q7Z7F7 128 aaKnown RBP8.03□□□□□ -1.12
TRAPPC4-212ENST00000533058 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
TRAPPC4-212ENST00000533058 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.13
TRAPPC4-212ENST00000533058 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
TRAPPC4-212ENST00000533058 VPREB1P12018 145 aa8.01□□□□□ -1.13
TRAPPC4-212ENST00000533058 PYY3Q5JQD4 70 aa8.01□□□□□ -1.13
TRAPPC4-212ENST00000533058 TP73-AS1Q9UF72 201 aa8.01□□□□□ -1.13
TRAPPC4-212ENST00000533058 IGLV5-37A0A075B6J1 123 aa8□□□□□ -1.13
TRAPPC4-212ENST00000533058 RPL37AP8A6NKH3 93 aa8□□□□□ -1.13
TRAPPC4-212ENST00000533058 NCR3O14931 201 aa8□□□□□ -1.13
TRAPPC4-212ENST00000533058 SPINK6Q6UWN8 80 aa8□□□□□ -1.13
TRAPPC4-212ENST00000533058 LINC00167Q96N53 147 aa8□□□□□ -1.13
TRAPPC4-212ENST00000533058 LITAFQ99732 161 aa8□□□□□ -1.13
TRAPPC4-212ENST00000533058 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
TRAPPC4-212ENST00000533058 Q8NDZ9 215 aa7.99□□□□□ -1.13
TRAPPC4-212ENST00000533058 M0R378 163 aa7.98□□□□□ -1.13
TRAPPC4-212ENST00000533058 COX8AP10176 69 aa7.98□□□□□ -1.13
TRAPPC4-212ENST00000533058 C1orf137Q5JT78 98 aa7.98□□□□□ -1.13
TRAPPC4-212ENST00000533058 LINC00308Q8TCZ7 52 aa7.98□□□□□ -1.13
TRAPPC4-212ENST00000533058 C14orf144Q96I85 54 aa7.98□□□□□ -1.13
TRAPPC4-212ENST00000533058 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
TRAPPC4-212ENST00000533058 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
TRAPPC4-212ENST00000533058 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
TRAPPC4-212ENST00000533058 MT1HL1P0DM35 61 aa7.97□□□□□ -1.13
TRAPPC4-212ENST00000533058 S100A12P80511 92 aa7.97□□□□□ -1.13
TRAPPC4-212ENST00000533058 SOSTDC1Q6X4U4 206 aa7.97□□□□□ -1.13
TRAPPC4-212ENST00000533058 COPS9Q8WXC6 57 aa7.97□□□□□ -1.13
TRAPPC4-212ENST00000533058 SPANXDQ9BXN6 97 aa7.97□□□□□ -1.13
TRAPPC4-212ENST00000533058 SPANXCQ9NY87 97 aa7.97□□□□□ -1.13
TRAPPC4-212ENST00000533058 LOC107984156A0A0G2JMH3 177 aa7.96□□□□□ -1.14
TRAPPC4-212ENST00000533058 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC4-212ENST00000533058 KRTAP11-1Q8IUC1 163 aa7.96□□□□□ -1.14
TRAPPC4-212ENST00000533058 ARL17AQ8IVW1 177 aa7.96□□□□□ -1.14
TRAPPC4-212ENST00000533058 SLC25A34Q6PIV7 304 aa7.95□□□□□ -1.14
TRAPPC4-212ENST00000533058 Q6ZVH6 145 aa7.95□□□□□ -1.14
TRAPPC4-212ENST00000533058 LINC01600Q96MT4 127 aa7.95□□□□□ -1.14
TRAPPC4-212ENST00000533058 SPANXB1Q9NS25 103 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC4-212ENST00000533058 IFITM1P13164 125 aa7.94□□□□□ -1.14
TRAPPC4-212ENST00000533058 S100A7L2Q5SY68 101 aa7.94□□□□□ -1.14
TRAPPC4-212ENST00000533058 DLEU1O43261 78 aa7.93□□□□□ -1.14
TRAPPC4-212ENST00000533058 NDUFC2O95298 119 aa7.93□□□□□ -1.14
TRAPPC4-212ENST00000533058 REG3GQ6UW15 175 aa7.93□□□□□ -1.14
TRAPPC4-212ENST00000533058 MUSTN1Q8IVN3 82 aa7.93□□□□□ -1.14
TRAPPC4-212ENST00000533058 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
TRAPPC4-212ENST00000533058 TRBV10-2A0A0K0K1G8 114 aa7.92□□□□□ -1.14
TRAPPC4-212ENST00000533058 OR13C6PQ8NH95 151 aa7.92□□□□□ -1.14
TRAPPC4-212ENST00000533058 HIST1H4GQ99525 98 aa7.92□□□□□ -1.14
TRAPPC4-212ENST00000533058 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
TRAPPC4-212ENST00000533058 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
TRAPPC4-212ENST00000533058 DDTP30046 118 aa7.91□□□□□ -1.14
TRAPPC4-212ENST00000533058 HMCN2Q8NDA2 5059 aa7.91□□□□□ -1.14
TRAPPC4-212ENST00000533058 UBE2AP49459 152 aa7.9□□□□□ -1.14
TRAPPC4-212ENST00000533058 LINC00518Q8N0U6 118 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms