RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 COX17Q14061 63 aa11.56□□□□□ -0.56
PUF60-218ENST00000531995 C20orf202A1L168 122 aa11.55□□□□□ -0.56
PUF60-218ENST00000531995 PHF5AQ7RTV0 110 aaKnown RBP11.55□□□□□ -0.56
PUF60-218ENST00000531995 ATOH7Q8N100 152 aa11.55□□□□□ -0.56
PUF60-218ENST00000531995 LRP2P98164 4655 aa11.55□□□□□ -0.56
PUF60-218ENST00000531995 MYMXA0A1B0GTQ4 84 aa11.54□□□□□ -0.56
PUF60-218ENST00000531995 HERV-K104P63124 156 aa11.54□□□□□ -0.56
PUF60-218ENST00000531995 FAM19A5Q7Z5A7 132 aaPredicted RBP11.54□□□□□ -0.56
PUF60-218ENST00000531995 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
PUF60-218ENST00000531995 KRTAP11-1Q8IUC1 163 aa11.53□□□□□ -0.56
PUF60-218ENST00000531995 SND1-IT1Q9HBX3 110 aa11.53□□□□□ -0.56
PUF60-218ENST00000531995 A0A0U1RRA0 63 aa11.52□□□□□ -0.57
PUF60-218ENST00000531995 LGALS3P17931 250 aaKnown RBP11.52□□□□□ -0.57
PUF60-218ENST00000531995 ANKRD39Q53RE8 183 aa11.52□□□□□ -0.57
PUF60-218ENST00000531995 NMUP48645 174 aa11.51□□□□□ -0.57
PUF60-218ENST00000531995 LINC00158P58513 81 aa11.51□□□□□ -0.57
PUF60-218ENST00000531995 Q8NDZ9 215 aa11.51□□□□□ -0.57
PUF60-218ENST00000531995 C7orf33Q8WU49 177 aa11.5□□□□□ -0.57
PUF60-218ENST00000531995 TTTY13Q9BZ97 58 aa11.5□□□□□ -0.57
PUF60-218ENST00000531995 C22orf24Q9Y442 160 aa11.5□□□□□ -0.57
PUF60-218ENST00000531995 A0A0J9YXY3 114 aa11.48□□□□□ -0.57
PUF60-218ENST00000531995 MEIG1Q5JSS6 88 aa11.48□□□□□ -0.57
PUF60-218ENST00000531995 TMA7Q9Y2S6 64 aaKnown RBP11.48□□□□□ -0.57
PUF60-218ENST00000531995 IGLV5-37A0A075B6J1 123 aa11.47□□□□□ -0.57
PUF60-218ENST00000531995 M0QXV9 152 aa11.47□□□□□ -0.57
PUF60-218ENST00000531995 AKR1D1P51857 326 aa11.47□□□□□ -0.57
PUF60-218ENST00000531995 PRR3P79522 188 aaKnown RBP11.47□□□□□ -0.57
PUF60-218ENST00000531995 MIR7-3HGQ8N6C7 128 aa11.47□□□□□ -0.57
PUF60-218ENST00000531995 RNF213Q63HN8 5207 aa11.47□□□□□ -0.57
PUF60-218ENST00000531995 LINC00587B1AMM8 73 aa11.46□□□□□ -0.57
PUF60-218ENST00000531995 VPREB1P12018 145 aa11.46□□□□□ -0.57
PUF60-218ENST00000531995 ADAMTSL4-AS1Q5T5F5 129 aa11.45□□□□□ -0.58
PUF60-218ENST00000531995 TP73-AS1Q9UF72 201 aa11.45□□□□□ -0.58
PUF60-218ENST00000531995 SCGB1D1O95968 90 aa11.44□□□□□ -0.58
PUF60-218ENST00000531995 DAND5Q8N907 189 aa11.44□□□□□ -0.58
PUF60-218ENST00000531995 LITAFQ99732 161 aa11.44□□□□□ -0.58
PUF60-218ENST00000531995 PSORS1C2Q9UIG4 136 aa11.44□□□□□ -0.58
PUF60-218ENST00000531995 ZNF815PA8K554 130 aa11.43□□□□□ -0.58
PUF60-218ENST00000531995 LOC107984156A0A0G2JMH3 177 aa11.42□□□□□ -0.58
PUF60-218ENST00000531995 MRPL55Q7Z7F7 128 aaKnown RBP11.42□□□□□ -0.58
PUF60-218ENST00000531995 PCP2Q8IVA1 136 aa11.42□□□□□ -0.58
PUF60-218ENST00000531995 ARL17AQ8IVW1 177 aa11.42□□□□□ -0.58
PUF60-218ENST00000531995 LINC00167Q96N53 147 aa11.42□□□□□ -0.58
PUF60-218ENST00000531995 EIF4EBP3O60516 100 aaPredicted RBP11.41□□□□□ -0.58
PUF60-218ENST00000531995 LBHQ53QV2 105 aaPredicted RBP11.4□□□□□ -0.58
PUF60-218ENST00000531995 TIMM17BO60830 172 aa11.39□□□□□ -0.59
PUF60-218ENST00000531995 JOSD1Q15040 202 aaPredicted RBP11.39□□□□□ -0.59
PUF60-218ENST00000531995 SOSTDC1Q6X4U4 206 aa11.39□□□□□ -0.59
PUF60-218ENST00000531995 GAGE10A6NGK3 116 aa11.38□□□□□ -0.59
PUF60-218ENST00000531995 RPL24P83731 157 aaKnown RBP11.38□□□□□ -0.59
PUF60-218ENST00000531995 SRSF9Q13242 221 aaKnown RBP eCLIP11.38□□□□□ -0.59
PUF60-218ENST00000531995 RPL37AP8A6NKH3 93 aa11.37□□□□□ -0.59
PUF60-218ENST00000531995 UBE2BP63146 152 aa11.37□□□□□ -0.59
PUF60-218ENST00000531995 BOD1L2Q8IYS8 172 aa11.37□□□□□ -0.59
PUF60-218ENST00000531995 NKAPP1Q8N9T2 125 aa11.37□□□□□ -0.59
PUF60-218ENST00000531995 LINC01600Q96MT4 127 aa11.37□□□□□ -0.59
PUF60-218ENST00000531995 C1orf137Q5JT78 98 aa11.36□□□□□ -0.59
PUF60-218ENST00000531995 IGLV1-50A0A075B6I6 118 aa11.34□□□□□ -0.59
PUF60-218ENST00000531995 HSBP1L1C9JCN9 74 aa11.34□□□□□ -0.59
PUF60-218ENST00000531995 NPC2P61916 151 aa11.33□□□□□ -0.6
PUF60-218ENST00000531995 M0R378 163 aa11.32□□□□□ -0.6
PUF60-218ENST00000531995 IGLV7-43P04211 117 aa11.32□□□□□ -0.6
PUF60-218ENST00000531995 PYY3Q5JQD4 70 aa11.32□□□□□ -0.6
PUF60-218ENST00000531995 LINC00308Q8TCZ7 52 aa11.32□□□□□ -0.6
PUF60-218ENST00000531995 NCR3O14931 201 aa11.31□□□□□ -0.6
PUF60-218ENST00000531995 SPANXDQ9BXN6 97 aa11.31□□□□□ -0.6
PUF60-218ENST00000531995 SPANXCQ9NY87 97 aa11.31□□□□□ -0.6
PUF60-218ENST00000531995 IGKV2-28A0A075B6P5 120 aa11.3□□□□□ -0.6
PUF60-218ENST00000531995 NDUFC2O95298 119 aa11.3□□□□□ -0.6
PUF60-218ENST00000531995 IGKV2D-28P01615 120 aa11.3□□□□□ -0.6
PUF60-218ENST00000531995 REG3GQ6UW15 175 aa11.3□□□□□ -0.6
PUF60-218ENST00000531995 SPINK6Q6UWN8 80 aa11.3□□□□□ -0.6
PUF60-218ENST00000531995 SCGB1D4Q6XE38 83 aa11.3□□□□□ -0.6
PUF60-218ENST00000531995 TMEM238C9JI98 176 aa11.27□□□□□ -0.61
PUF60-218ENST00000531995 COX8AP10176 69 aa11.27□□□□□ -0.61
PUF60-218ENST00000531995 MIEN1Q9BRT3 115 aa11.27□□□□□ -0.61
PUF60-218ENST00000531995 PAM16Q9Y3D7 125 aa11.27□□□□□ -0.61
PUF60-218ENST00000531995 TRBV10-2A0A0K0K1G8 114 aa11.26□□□□□ -0.61
PUF60-218ENST00000531995 BCE1O60756 84 aa11.26□□□□□ -0.61
PUF60-218ENST00000531995 SPATA45Q537H7 98 aa11.26□□□□□ -0.61
PUF60-218ENST00000531995 KRTAP10-8P60410 259 aa11.25□□□□□ -0.61
PUF60-218ENST00000531995 KRTAP13-1Q8IUC0 172 aa11.25□□□□□ -0.61
PUF60-218ENST00000531995 TRBV10-3A0A0K0K1G6 114 aa11.24□□□□□ -0.61
PUF60-218ENST00000531995 DLEU1O43261 78 aa11.24□□□□□ -0.61
PUF60-218ENST00000531995 MUSTN1Q8IVN3 82 aa11.24□□□□□ -0.61
PUF60-218ENST00000531995 C14orf144Q96I85 54 aa11.24□□□□□ -0.61
PUF60-218ENST00000531995 VAMP8Q9BV40 100 aa11.24□□□□□ -0.61
PUF60-218ENST00000531995 TMEM126AQ9H061 195 aa11.24□□□□□ -0.61
PUF60-218ENST00000531995 SPANXB1Q9NS25 103 aaPredicted RBP11.24□□□□□ -0.61
PUF60-218ENST00000531995 Q6ZVH6 145 aa11.23□□□□□ -0.61
PUF60-218ENST00000531995 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
PUF60-218ENST00000531995 KCNQ1DNQ9H478 68 aa11.23□□□□□ -0.61
PUF60-218ENST00000531995 ZNF861PO60384 105 aa11.22□□□□□ -0.61
PUF60-218ENST00000531995 IGLV6-57P01721 117 aa11.22□□□□□ -0.61
PUF60-218ENST00000531995 LPAP08519 4548 aa11.22□□□□□ -0.61
PUF60-218ENST00000531995 IFITM1P13164 125 aa11.22□□□□□ -0.61
PUF60-218ENST00000531995 SPRR1AP35321 89 aa11.21□□□□□ -0.61
PUF60-218ENST00000531995 KRTAP4-16G5E9R7 235 aaPredicted RBP11.2□□□□□ -0.62
PUF60-218ENST00000531995 DDTP30046 118 aa11.2□□□□□ -0.62
PUF60-218ENST00000531995 H0Y9J4 135 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms