RNA–Protein interactions for RNA: ENST00000531319.1

AP004608.1-201, humanhuman

TSL 2 BASIC

Gene AP004608.1, Length 1,402 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-201ENST00000531319 PLA2G2DQ9UNK4 145 aa13.2□□□□□ -0.3
AP004608.1-201ENST00000531319 C22orf24Q9Y442 160 aa13.2□□□□□ -0.3
AP004608.1-201ENST00000531319 ATOH7Q8N100 152 aa13.18□□□□□ -0.3
AP004608.1-201ENST00000531319 PSORS1C2Q9UIG4 136 aa13.18□□□□□ -0.3
AP004608.1-201ENST00000531319 LGALS3P17931 250 aaKnown RBP13.17□□□□□ -0.3
AP004608.1-201ENST00000531319 LINC00158P58513 81 aa13.17□□□□□ -0.3
AP004608.1-201ENST00000531319 LRP1Q07954 4544 aaKnown RBP13.17□□□□□ -0.3
AP004608.1-201ENST00000531319 IGLV5-37A0A075B6J1 123 aa13.16□□□□□ -0.3
AP004608.1-201ENST00000531319 C20orf202A1L168 122 aa13.16□□□□□ -0.3
AP004608.1-201ENST00000531319 NMUP48645 174 aa13.16□□□□□ -0.3
AP004608.1-201ENST00000531319 MEIG1Q5JSS6 88 aa13.15□□□□□ -0.3
AP004608.1-201ENST00000531319 VPREB1P12018 145 aa13.14□□□□□ -0.31
AP004608.1-201ENST00000531319 ANKRD39Q53RE8 183 aa13.14□□□□□ -0.31
AP004608.1-201ENST00000531319 TTTY13Q9BZ97 58 aa13.14□□□□□ -0.31
AP004608.1-201ENST00000531319 TP73-AS1Q9UF72 201 aa13.14□□□□□ -0.31
AP004608.1-201ENST00000531319 MIR7-3HGQ8N6C7 128 aa13.13□□□□□ -0.31
AP004608.1-201ENST00000531319 A0A0J9YXY3 114 aa13.12□□□□□ -0.31
AP004608.1-201ENST00000531319 MRPL55Q7Z7F7 128 aaKnown RBP13.12□□□□□ -0.31
AP004608.1-201ENST00000531319 DAND5Q8N907 189 aa13.12□□□□□ -0.31
AP004608.1-201ENST00000531319 FAT3Q8TDW7 4589 aa13.11□□□□□ -0.31
AP004608.1-201ENST00000531319 LINC00167Q96N53 147 aa13.1□□□□□ -0.31
AP004608.1-201ENST00000531319 UBE2BP63146 152 aa13.09□□□□□ -0.31
AP004608.1-201ENST00000531319 SRSF9Q13242 221 aaKnown RBP eCLIP13.09□□□□□ -0.31
AP004608.1-201ENST00000531319 LINC00587B1AMM8 73 aa13.08□□□□□ -0.32
AP004608.1-201ENST00000531319 C1orf137Q5JT78 98 aa13.08□□□□□ -0.32
AP004608.1-201ENST00000531319 ADAMTSL4-AS1Q5T5F5 129 aa13.08□□□□□ -0.32
AP004608.1-201ENST00000531319 LITAFQ99732 161 aa13.08□□□□□ -0.32
AP004608.1-201ENST00000531319 GAGE10A6NGK3 116 aa13.07□□□□□ -0.32
AP004608.1-201ENST00000531319 LBHQ53QV2 105 aaPredicted RBP13.07□□□□□ -0.32
AP004608.1-201ENST00000531319 RPL37AP8A6NKH3 93 aa13.06□□□□□ -0.32
AP004608.1-201ENST00000531319 NKAPP1Q8N9T2 125 aa13.06□□□□□ -0.32
AP004608.1-201ENST00000531319 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
AP004608.1-201ENST00000531319 ZNF815PA8K554 130 aa13.05□□□□□ -0.32
AP004608.1-201ENST00000531319 EIF4EBP3O60516 100 aaPredicted RBP13.05□□□□□ -0.32
AP004608.1-201ENST00000531319 AKR1D1P51857 326 aa13.05□□□□□ -0.32
AP004608.1-201ENST00000531319 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
AP004608.1-201ENST00000531319 BOD1L2Q8IYS8 172 aa13.05□□□□□ -0.32
AP004608.1-201ENST00000531319 RPL24P83731 157 aaKnown RBP13.04□□□□□ -0.32
AP004608.1-201ENST00000531319 SOSTDC1Q6X4U4 206 aa13.04□□□□□ -0.32
AP004608.1-201ENST00000531319 PCP2Q8IVA1 136 aa13.04□□□□□ -0.32
AP004608.1-201ENST00000531319 IGLV7-43P04211 117 aa13.03□□□□□ -0.32
AP004608.1-201ENST00000531319 TMA7Q9Y2S6 64 aaKnown RBP13.02□□□□□ -0.33
AP004608.1-201ENST00000531319 IGLV1-50A0A075B6I6 118 aa13.01□□□□□ -0.33
AP004608.1-201ENST00000531319 DMBT1Q9UGM3 2413 aaPredicted RBP13.01□□□□□ -0.33
AP004608.1-201ENST00000531319 IGKV2-28A0A075B6P5 120 aa13□□□□□ -0.33
AP004608.1-201ENST00000531319 SCGB1D1O95968 90 aa13□□□□□ -0.33
AP004608.1-201ENST00000531319 IGKV2D-28P01615 120 aa13□□□□□ -0.33
AP004608.1-201ENST00000531319 SPINK6Q6UWN8 80 aa13□□□□□ -0.33
AP004608.1-201ENST00000531319 TIMM17BO60830 172 aa12.99□□□□□ -0.33
AP004608.1-201ENST00000531319 KRTAP29-1A8MX34 341 aaPredicted RBP12.98□□□□□ -0.33
AP004608.1-201ENST00000531319 NPC2P61916 151 aa12.98□□□□□ -0.33
AP004608.1-201ENST00000531319 NCR3O14931 201 aa12.97□□□□□ -0.33
AP004608.1-201ENST00000531319 M0R378 163 aa12.96□□□□□ -0.33
AP004608.1-201ENST00000531319 TMEM238C9JI98 176 aa12.96□□□□□ -0.34
AP004608.1-201ENST00000531319 BCE1O60756 84 aa12.95□□□□□ -0.34
AP004608.1-201ENST00000531319 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
AP004608.1-201ENST00000531319 HERC1Q15751 4861 aa12.94□□□□□ -0.34
AP004608.1-201ENST00000531319 OXTP01178 125 aa12.93□□□□□ -0.34
AP004608.1-201ENST00000531319 KRTAP13-1Q8IUC0 172 aa12.93□□□□□ -0.34
AP004608.1-201ENST00000531319 TMEM126AQ9H061 195 aa12.93□□□□□ -0.34
AP004608.1-201ENST00000531319 SCGB1D4Q6XE38 83 aa12.92□□□□□ -0.34
AP004608.1-201ENST00000531319 HSBP1L1C9JCN9 74 aa12.91□□□□□ -0.34
AP004608.1-201ENST00000531319 NDUFC2O95298 119 aa12.91□□□□□ -0.34
AP004608.1-201ENST00000531319 JOSD1Q15040 202 aaPredicted RBP12.91□□□□□ -0.34
AP004608.1-201ENST00000531319 MIEN1Q9BRT3 115 aa12.91□□□□□ -0.34
AP004608.1-201ENST00000531319 TRBV10-3A0A0K0K1G6 114 aa12.9□□□□□ -0.34
AP004608.1-201ENST00000531319 H0Y9J4 135 aa12.9□□□□□ -0.34
AP004608.1-201ENST00000531319 ZNF861PO60384 105 aa12.9□□□□□ -0.34
AP004608.1-201ENST00000531319 MT1HL1P0DM35 61 aa12.9□□□□□ -0.34
AP004608.1-201ENST00000531319 SPANXDQ9BXN6 97 aa12.9□□□□□ -0.34
AP004608.1-201ENST00000531319 SPANXCQ9NY87 97 aa12.9□□□□□ -0.34
AP004608.1-201ENST00000531319 TRBV10-2A0A0K0K1G8 114 aa12.89□□□□□ -0.35
AP004608.1-201ENST00000531319 REG3GQ6UW15 175 aa12.89□□□□□ -0.35
AP004608.1-201ENST00000531319 SPANXB1Q9NS25 103 aaPredicted RBP12.89□□□□□ -0.35
AP004608.1-201ENST00000531319 DIRC1Q969H9 104 aa12.88□□□□□ -0.35
AP004608.1-201ENST00000531319 KCNQ1DNQ9H478 68 aa12.87□□□□□ -0.35
AP004608.1-201ENST00000531319 TNXBP22105 4242 aa12.86□□□□□ -0.35
AP004608.1-201ENST00000531319 PYY3Q5JQD4 70 aa12.86□□□□□ -0.35
AP004608.1-201ENST00000531319 LINC01600Q96MT4 127 aa12.86□□□□□ -0.35
AP004608.1-201ENST00000531319 IGLV6-57P01721 117 aa12.85□□□□□ -0.35
AP004608.1-201ENST00000531319 KRTAP1-4P0C5Y4 121 aa12.85□□□□□ -0.35
AP004608.1-201ENST00000531319 KRTAP4-16G5E9R7 235 aaPredicted RBP12.84□□□□□ -0.35
AP004608.1-201ENST00000531319 J3QL48 77 aa12.84□□□□□ -0.35
AP004608.1-201ENST00000531319 PRYO14603 147 aa12.84□□□□□ -0.35
AP004608.1-201ENST00000531319 DDTP30046 118 aa12.84□□□□□ -0.35
AP004608.1-201ENST00000531319 SPRR1AP35321 89 aa12.84□□□□□ -0.35
AP004608.1-201ENST00000531319 RPL28P46779 137 aaKnown RBP12.84□□□□□ -0.35
AP004608.1-201ENST00000531319 PRLHP81277 87 aa12.84□□□□□ -0.35
AP004608.1-201ENST00000531319 COX8AP10176 69 aa12.82□□□□□ -0.36
AP004608.1-201ENST00000531319 FAM19A1Q7Z5A9 133 aa12.82□□□□□ -0.36
AP004608.1-201ENST00000531319 PAM16Q9Y3D7 125 aa12.82□□□□□ -0.36
AP004608.1-201ENST00000531319 UBE2AP49459 152 aa12.81□□□□□ -0.36
AP004608.1-201ENST00000531319 SPATA45Q537H7 98 aa12.81□□□□□ -0.36
AP004608.1-201ENST00000531319 Q6ZVH6 145 aa12.8□□□□□ -0.36
AP004608.1-201ENST00000531319 MUSTN1Q8IVN3 82 aa12.8□□□□□ -0.36
AP004608.1-201ENST00000531319 PPDPFQ9H3Y8 114 aa12.8□□□□□ -0.36
AP004608.1-201ENST00000531319 IFITM1P13164 125 aa12.79□□□□□ -0.36
AP004608.1-201ENST00000531319 LINC00337Q8N6G1 96 aa12.79□□□□□ -0.36
AP004608.1-201ENST00000531319 VAMP8Q9BV40 100 aa12.79□□□□□ -0.36
AP004608.1-201ENST00000531319 KRTAP10-8P60410 259 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms