RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 UNC13AQ9UPW8 1703 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 A0A087WVE0 104 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 TRBV7-4A0A0J9YYF1 115 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 CLPSL2Q6UWE3 100 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 AKAP14Q86UN6 197 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 Q8N8P6 123 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 DPH3Q96FX2 82 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 PDCD10Q9BUL8 212 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 LINC01558Q9Y6Z2 57 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 NKTRP30414 1462 aaKnown RBP-0.81□□□□□ -2.54
NUP98-218ENST00000530516 MAGI1Q96QZ7 1491 aaPredicted RBP-0.81□□□□□ -2.54
NUP98-218ENST00000530516 TET3O43151 1660 aa-0.81□□□□□ -2.54
NUP98-218ENST00000530516 VPS13AQ96RL7 3174 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 SETBP1Q9Y6X0 1596 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 LOC285095A0A1B0GVY8 99 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 IGLC7A0M8Q6 106 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 H0YGG7 62 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 SSSCA1O60232 199 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 SMIM21Q3B7S5 101 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 H1FX-AS1Q4G0G2 97 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 WFDC9Q8NEX5 89 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 ANP32BQ92688 251 aaKnown RBP-0.82□□□□□ -2.54
NUP98-218ENST00000530516 XRN1Q8IZH2 1706 aaKnown RBP-0.82□□□□□ -2.54
NUP98-218ENST00000530516 MAGI2Q86UL8 1455 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 SCN7AQ01118 1682 aa-0.82□□□□□ -2.54
NUP98-218ENST00000530516 TRBV7-3A0A075B6L6 115 aa-0.83□□□□□ -2.54
NUP98-218ENST00000530516 LCE6AA0A183 80 aa-0.83□□□□□ -2.54
NUP98-218ENST00000530516 LINC00959A0A1B0GUT2 108 aa-0.83□□□□□ -2.54
NUP98-218ENST00000530516 HMGN4O00479 90 aa-0.83□□□□□ -2.54
NUP98-218ENST00000530516 MGPP08493 103 aa-0.83□□□□□ -2.54
NUP98-218ENST00000530516 COX8AP10176 69 aa-0.83□□□□□ -2.54
NUP98-218ENST00000530516 HIST1H1DP16402 221 aaKnown RBP-0.83□□□□□ -2.54
NUP98-218ENST00000530516 PDCD11Q14690 1871 aaKnown RBP-0.84□□□□□ -2.54
NUP98-218ENST00000530516 UTRNP46939 3433 aa-0.84□□□□□ -2.54
NUP98-218ENST00000530516 SYS1-DBNDD2H3BUS1 97 aa-0.84□□□□□ -2.54
NUP98-218ENST00000530516 SFT2D2O95562 160 aa-0.84□□□□□ -2.54
NUP98-218ENST00000530516 DR1Q01658 176 aa-0.84□□□□□ -2.54
NUP98-218ENST00000530516 TMEM263Q8WUH6 116 aaKnown RBP-0.84□□□□□ -2.54
NUP98-218ENST00000530516 LINC01600Q96MT4 127 aa-0.84□□□□□ -2.54
NUP98-218ENST00000530516 RERGLQ9H628 205 aa-0.84□□□□□ -2.54
NUP98-218ENST00000530516 SERP1Q9Y6X1 66 aa-0.84□□□□□ -2.54
NUP98-218ENST00000530516 CPSF1Q10570 1443 aaKnown RBP-0.84□□□□□ -2.54
NUP98-218ENST00000530516 ANKRD36A6QL64 1941 aa-0.84□□□□□ -2.54
NUP98-218ENST00000530516 ROBO1Q9Y6N7 1651 aa-0.84□□□□□ -2.54
NUP98-218ENST00000530516 IFNGP01579 166 aa-0.85□□□□□ -2.55
NUP98-218ENST00000530516 LSM10Q969L4 123 aaKnown RBP-0.85□□□□□ -2.55
NUP98-218ENST00000530516 USMG5Q96IX5 58 aa-0.85□□□□□ -2.55
NUP98-218ENST00000530516 PFDN5Q99471 154 aa-0.85□□□□□ -2.55
NUP98-218ENST00000530516 PAIP2BQ9ULR5 123 aaKnown RBP-0.85□□□□□ -2.55
NUP98-218ENST00000530516 PRDM15P57071 1507 aaPredicted RBP-0.85□□□□□ -2.55
NUP98-218ENST00000530516 HMGXB3Q12766 1538 aa-0.85□□□□□ -2.55
NUP98-218ENST00000530516 XIRP2A4UGR9 3374 aa-0.85□□□□□ -2.55
NUP98-218ENST00000530516 ABCC10Q5T3U5 1492 aa-0.86□□□□□ -2.55
NUP98-218ENST00000530516 SMARCA2P51531 1590 aa-0.86□□□□□ -2.55
NUP98-218ENST00000530516 ARPC4P59998 168 aa-0.86□□□□□ -2.55
NUP98-218ENST00000530516 PPP3R2Q96LZ3 170 aa-0.86□□□□□ -2.55
NUP98-218ENST00000530516 SNRNP25Q9BV90 132 aaKnown RBP-0.86□□□□□ -2.55
NUP98-218ENST00000530516 NAA60Q9H7X0 242 aa-0.86□□□□□ -2.55
NUP98-218ENST00000530516 FAIMQ9NVQ4 179 aa-0.86□□□□□ -2.55
NUP98-218ENST00000530516 TIAM2Q8IVF5 1701 aa-0.86□□□□□ -2.55
NUP98-218ENST00000530516 KIAA1551Q9HCM1 1747 aa-0.86□□□□□ -2.55
NUP98-218ENST00000530516 TNP1P09430 55 aa-0.87□□□□□ -2.55
NUP98-218ENST00000530516 PRLHP81277 87 aa-0.87□□□□□ -2.55
NUP98-218ENST00000530516 WHAMMP3Q1A5X7 153 aa-0.87□□□□□ -2.55
NUP98-218ENST00000530516 DEFB136Q30KP8 78 aa-0.87□□□□□ -2.55
NUP98-218ENST00000530516 C10orf113Q5VZT2 155 aa-0.87□□□□□ -2.55
NUP98-218ENST00000530516 MRPL54Q6P161 138 aaKnown RBP-0.87□□□□□ -2.55
NUP98-218ENST00000530516 TSLPQ969D9 159 aa-0.87□□□□□ -2.55
NUP98-218ENST00000530516 SPRR4Q96PI1 79 aa-0.87□□□□□ -2.55
NUP98-218ENST00000530516 ALKQ9UM73 1620 aa-0.87□□□□□ -2.55
NUP98-218ENST00000530516 DIP2CQ9Y2E4 1556 aa-0.87□□□□□ -2.55
NUP98-218ENST00000530516 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.87□□□□□ -2.55
NUP98-218ENST00000530516 EHBP1L1Q8N3D4 1523 aa-0.88□□□□□ -2.55
NUP98-218ENST00000530516 SPANXDQ9BXN6 97 aa-0.88□□□□□ -2.55
NUP98-218ENST00000530516 APLNQ9ULZ1 77 aa-0.88□□□□□ -2.55
NUP98-218ENST00000530516 CCDC141Q6ZP82 1450 aa-0.88□□□□□ -2.55
NUP98-218ENST00000530516 CUL7Q14999 1698 aa-0.88□□□□□ -2.55
NUP98-218ENST00000530516 GOLGB1Q14789 3259 aaKnown RBP-0.88□□□□□ -2.55
NUP98-218ENST00000530516 NCOA3Q9Y6Q9 1424 aa-0.89□□□□□ -2.55
NUP98-218ENST00000530516 PIK3C2BO00750 1634 aa-0.89□□□□□ -2.55
NUP98-218ENST00000530516 UBE2D3P61077 147 aa-0.89□□□□□ -2.55
NUP98-218ENST00000530516 UBE2D2P62837 147 aa-0.89□□□□□ -2.55
NUP98-218ENST00000530516 C8orf59Q8N0T1 100 aaPredicted RBP-0.89□□□□□ -2.55
NUP98-218ENST00000530516 FAM167A-AS1Q96KT0 104 aa-0.89□□□□□ -2.55
NUP98-218ENST00000530516 NXT2Q9NPJ8 142 aaKnown RBP-0.89□□□□□ -2.55
NUP98-218ENST00000530516 UQCR10Q9UDW1 63 aa-0.89□□□□□ -2.55
NUP98-218ENST00000530516 ZNF831Q5JPB2 1677 aa-0.89□□□□□ -2.55
NUP98-218ENST00000530516 TOP2BQ02880 1626 aa-0.89□□□□□ -2.55
NUP98-218ENST00000530516 NAIPQ13075 1403 aa-0.89□□□□□ -2.55
NUP98-218ENST00000530516 C1orf167Q5SNV9 1468 aa-0.9□□□□□ -2.55
NUP98-218ENST00000530516 MMP24-AS1A0A0U1RRL7 71 aa-0.9□□□□□ -2.55
NUP98-218ENST00000530516 LINC01546A6NGU7 62 aa-0.9□□□□□ -2.55
NUP98-218ENST00000530516 CPSF4LA6NMK7 179 aaKnown RBP-0.9□□□□□ -2.55
NUP98-218ENST00000530516 MIF4GDA9UHW6 222 aaKnown RBP-0.9□□□□□ -2.55
NUP98-218ENST00000530516 H7BZZ5 65 aa-0.9□□□□□ -2.55
NUP98-218ENST00000530516 IGLC1P0CG04 106 aa-0.9□□□□□ -2.55
NUP98-218ENST00000530516 FGF7P21781 194 aa-0.9□□□□□ -2.55
NUP98-218ENST00000530516 UBA52P62987 128 aaKnown RBP-0.9□□□□□ -2.55
NUP98-218ENST00000530516 BTG2P78543 158 aa-0.9□□□□□ -2.55
NUP98-218ENST00000530516 COMMD6Q7Z4G1 85 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 260.5 ms