RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 SRRM2Q9UQ35 2752 aaKnown RBP6.85□□□□□ -1.31
CAPN1-218ENST00000530442 RPL37AP61513 92 aaKnown RBP6.84□□□□□ -1.31
CAPN1-218ENST00000530442 MIR7-3HGQ8N6C7 128 aa6.84□□□□□ -1.31
CAPN1-218ENST00000530442 C7orf33Q8WU49 177 aa6.84□□□□□ -1.31
CAPN1-218ENST00000530442 A0A0J9YXY3 114 aa6.83□□□□□ -1.32
CAPN1-218ENST00000530442 ZNF815PA8K554 130 aa6.83□□□□□ -1.32
CAPN1-218ENST00000530442 SCGB1D1O95968 90 aa6.83□□□□□ -1.32
CAPN1-218ENST00000530442 Q8NDZ9 215 aa6.83□□□□□ -1.32
CAPN1-218ENST00000530442 PLA2G2DQ9UNK4 145 aa6.83□□□□□ -1.32
CAPN1-218ENST00000530442 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
CAPN1-218ENST00000530442 IGLV5-37A0A075B6J1 123 aa6.82□□□□□ -1.32
CAPN1-218ENST00000530442 LINC00587B1AMM8 73 aa6.82□□□□□ -1.32
CAPN1-218ENST00000530442 PLA2G1BP04054 148 aaKnown RBP6.82□□□□□ -1.32
CAPN1-218ENST00000530442 KRTAP11-1Q8IUC1 163 aa6.82□□□□□ -1.32
CAPN1-218ENST00000530442 DAND5Q8N907 189 aa6.82□□□□□ -1.32
CAPN1-218ENST00000530442 C22orf24Q9Y442 160 aa6.82□□□□□ -1.32
CAPN1-218ENST00000530442 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
CAPN1-218ENST00000530442 VPREB1P12018 145 aa6.81□□□□□ -1.32
CAPN1-218ENST00000530442 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
CAPN1-218ENST00000530442 PCP2Q8IVA1 136 aa6.81□□□□□ -1.32
CAPN1-218ENST00000530442 LITAFQ99732 161 aa6.81□□□□□ -1.32
CAPN1-218ENST00000530442 TP73-AS1Q9UF72 201 aa6.81□□□□□ -1.32
CAPN1-218ENST00000530442 HNRNPA3P51991 378 aaKnown RBP6.8□□□□□ -1.32
CAPN1-218ENST00000530442 MRPL55Q7Z7F7 128 aaKnown RBP6.8□□□□□ -1.32
CAPN1-218ENST00000530442 HSBP1L1C9JCN9 74 aa6.79□□□□□ -1.32
CAPN1-218ENST00000530442 UBE2BP63146 152 aa6.79□□□□□ -1.32
CAPN1-218ENST00000530442 JOSD1Q15040 202 aaPredicted RBP6.79□□□□□ -1.32
CAPN1-218ENST00000530442 ADAMTSL4-AS1Q5T5F5 129 aa6.79□□□□□ -1.32
CAPN1-218ENST00000530442 PSORS1C2Q9UIG4 136 aa6.79□□□□□ -1.32
CAPN1-218ENST00000530442 TIMM17BO60830 172 aa6.78□□□□□ -1.32
CAPN1-218ENST00000530442 SOSTDC1Q6X4U4 206 aa6.78□□□□□ -1.32
CAPN1-218ENST00000530442 NKAPP1Q8N9T2 125 aa6.78□□□□□ -1.32
CAPN1-218ENST00000530442 LINC00167Q96N53 147 aa6.78□□□□□ -1.32
CAPN1-218ENST00000530442 LRP1Q07954 4544 aaKnown RBP6.78□□□□□ -1.32
CAPN1-218ENST00000530442 LOC107984156A0A0G2JMH3 177 aa6.77□□□□□ -1.33
CAPN1-218ENST00000530442 GAGE10A6NGK3 116 aa6.77□□□□□ -1.33
CAPN1-218ENST00000530442 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
CAPN1-218ENST00000530442 NPC2P61916 151 aa6.77□□□□□ -1.33
CAPN1-218ENST00000530442 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
CAPN1-218ENST00000530442 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
CAPN1-218ENST00000530442 ARL17AQ8IVW1 177 aa6.77□□□□□ -1.33
CAPN1-218ENST00000530442 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
CAPN1-218ENST00000530442 PYY3Q5JQD4 70 aa6.76□□□□□ -1.33
CAPN1-218ENST00000530442 SCGB1D4Q6XE38 83 aa6.76□□□□□ -1.33
CAPN1-218ENST00000530442 RPL37AP8A6NKH3 93 aa6.75□□□□□ -1.33
CAPN1-218ENST00000530442 NCR3O14931 201 aa6.75□□□□□ -1.33
CAPN1-218ENST00000530442 INAFM2P0DMQ5 153 aa6.75□□□□□ -1.33
CAPN1-218ENST00000530442 C1orf137Q5JT78 98 aa6.75□□□□□ -1.33
CAPN1-218ENST00000530442 MIEN1Q9BRT3 115 aa6.75□□□□□ -1.33
CAPN1-218ENST00000530442 SPANXDQ9BXN6 97 aa6.75□□□□□ -1.33
CAPN1-218ENST00000530442 SPANXCQ9NY87 97 aa6.75□□□□□ -1.33
CAPN1-218ENST00000530442 PAM16Q9Y3D7 125 aa6.75□□□□□ -1.33
CAPN1-218ENST00000530442 FLG2Q5D862 2391 aaPredicted RBP6.74□□□□□ -1.33
CAPN1-218ENST00000530442 IGKV2-28A0A075B6P5 120 aa6.74□□□□□ -1.33
CAPN1-218ENST00000530442 TMEM238C9JI98 176 aa6.74□□□□□ -1.33
CAPN1-218ENST00000530442 IGKV2D-28P01615 120 aa6.74□□□□□ -1.33
CAPN1-218ENST00000530442 LINC00308Q8TCZ7 52 aa6.74□□□□□ -1.33
CAPN1-218ENST00000530442 IGLV1-50A0A075B6I6 118 aa6.73□□□□□ -1.33
CAPN1-218ENST00000530442 M0R378 163 aa6.73□□□□□ -1.33
CAPN1-218ENST00000530442 SPATA45Q537H7 98 aa6.73□□□□□ -1.33
CAPN1-218ENST00000530442 VAMP8Q9BV40 100 aa6.73□□□□□ -1.33
CAPN1-218ENST00000530442 NDUFC2O95298 119 aa6.72□□□□□ -1.33
CAPN1-218ENST00000530442 IGLV7-43P04211 117 aa6.72□□□□□ -1.33
CAPN1-218ENST00000530442 COX8AP10176 69 aa6.72□□□□□ -1.33
CAPN1-218ENST00000530442 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
CAPN1-218ENST00000530442 TRBV10-2A0A0K0K1G8 114 aa6.7□□□□□ -1.34
CAPN1-218ENST00000530442 SRSF9Q13242 221 aaKnown RBP eCLIP6.7□□□□□ -1.34
CAPN1-218ENST00000530442 TNXBP22105 4242 aa6.7□□□□□ -1.34
CAPN1-218ENST00000530442 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
CAPN1-218ENST00000530442 DLEU1O43261 78 aa6.69□□□□□ -1.34
CAPN1-218ENST00000530442 BCE1O60756 84 aa6.69□□□□□ -1.34
CAPN1-218ENST00000530442 SPINK6Q6UWN8 80 aa6.69□□□□□ -1.34
CAPN1-218ENST00000530442 Q6ZVH6 145 aa6.69□□□□□ -1.34
CAPN1-218ENST00000530442 C14orf144Q96I85 54 aa6.69□□□□□ -1.34
CAPN1-218ENST00000530442 TMEM126AQ9H061 195 aa6.69□□□□□ -1.34
CAPN1-218ENST00000530442 PPDPFQ9H3Y8 114 aa6.69□□□□□ -1.34
CAPN1-218ENST00000530442 PRYO14603 147 aa6.68□□□□□ -1.34
CAPN1-218ENST00000530442 IFITM1P13164 125 aa6.68□□□□□ -1.34
CAPN1-218ENST00000530442 REG3GQ6UW15 175 aa6.68□□□□□ -1.34
CAPN1-218ENST00000530442 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
CAPN1-218ENST00000530442 MUSTN1Q8IVN3 82 aa6.68□□□□□ -1.34
CAPN1-218ENST00000530442 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
CAPN1-218ENST00000530442 DDTP30046 118 aa6.67□□□□□ -1.34
CAPN1-218ENST00000530442 COPS9Q8WXC6 57 aa6.67□□□□□ -1.34
CAPN1-218ENST00000530442 KCNQ1DNQ9H478 68 aa6.67□□□□□ -1.34
CAPN1-218ENST00000530442 ZNF861PO60384 105 aa6.66□□□□□ -1.34
CAPN1-218ENST00000530442 SPRR1AP35321 89 aa6.66□□□□□ -1.34
CAPN1-218ENST00000530442 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
CAPN1-218ENST00000530442 C2orf91Q6ZV80 131 aa6.66□□□□□ -1.34
CAPN1-218ENST00000530442 LINC00337Q8N6G1 96 aa6.66□□□□□ -1.34
CAPN1-218ENST00000530442 H0Y9J4 135 aa6.65□□□□□ -1.34
CAPN1-218ENST00000530442 PRLHP81277 87 aa6.65□□□□□ -1.34
CAPN1-218ENST00000530442 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.34
CAPN1-218ENST00000530442 FAM19A1Q7Z5A9 133 aa6.65□□□□□ -1.34
CAPN1-218ENST00000530442 TRAV23DV6A0A075B6W5 121 aa6.64□□□□□ -1.35
CAPN1-218ENST00000530442 KRTAP4-16G5E9R7 235 aaPredicted RBP6.64□□□□□ -1.35
CAPN1-218ENST00000530442 RPL28P46779 137 aaKnown RBP6.64□□□□□ -1.35
CAPN1-218ENST00000530442 UBE2AP49459 152 aa6.64□□□□□ -1.35
CAPN1-218ENST00000530442 DIRC1Q969H9 104 aa6.64□□□□□ -1.35
CAPN1-218ENST00000530442 HIGD1BQ9P298 99 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms