RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 TRGC2P03986 189 aa9.25□□□□□ -0.93
COL16A1-216ENST00000529928 LINC00310P59036 64 aa9.25□□□□□ -0.93
COL16A1-216ENST00000529928 NKAPP1Q8N9T2 125 aa9.25□□□□□ -0.93
COL16A1-216ENST00000529928 PPDPFQ9H3Y8 114 aa9.25□□□□□ -0.93
COL16A1-216ENST00000529928 TRAV12-1A0A0B4J245 112 aa9.24□□□□□ -0.93
COL16A1-216ENST00000529928 COLCA2A8K830 154 aa9.23□□□□□ -0.93
COL16A1-216ENST00000529928 FAM19A2Q8N3H0 131 aa9.23□□□□□ -0.93
COL16A1-216ENST00000529928 IFI27L1Q96BM0 104 aa9.23□□□□□ -0.93
COL16A1-216ENST00000529928 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
COL16A1-216ENST00000529928 ZNF625Q96I27 306 aaPredicted RBP9.22□□□□□ -0.93
COL16A1-216ENST00000529928 MUC17Q685J3 4493 aa9.21□□□□□ -0.93
COL16A1-216ENST00000529928 IGKV2-28A0A075B6P5 120 aa9.21□□□□□ -0.94
COL16A1-216ENST00000529928 IGKV2D-28P01615 120 aa9.21□□□□□ -0.94
COL16A1-216ENST00000529928 TMEM170BQ5T4T1 132 aa9.21□□□□□ -0.94
COL16A1-216ENST00000529928 TMEM223A0PJW6 202 aa9.2□□□□□ -0.94
COL16A1-216ENST00000529928 HSBP1O75506 76 aa9.2□□□□□ -0.94
COL16A1-216ENST00000529928 LINC01547P58512 204 aaPredicted RBP9.2□□□□□ -0.94
COL16A1-216ENST00000529928 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
COL16A1-216ENST00000529928 SERF1AO75920 110 aa9.19□□□□□ -0.94
COL16A1-216ENST00000529928 PRLHP81277 87 aa9.19□□□□□ -0.94
COL16A1-216ENST00000529928 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
COL16A1-216ENST00000529928 PFN2P35080 140 aa9.18□□□□□ -0.94
COL16A1-216ENST00000529928 COX17Q14061 63 aa9.18□□□□□ -0.94
COL16A1-216ENST00000529928 SPAG11AQ6PDA7 123 aa9.18□□□□□ -0.94
COL16A1-216ENST00000529928 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
COL16A1-216ENST00000529928 FAM19A1Q7Z5A9 133 aa9.18□□□□□ -0.94
COL16A1-216ENST00000529928 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
COL16A1-216ENST00000529928 SCO1O75880 301 aa9.16□□□□□ -0.94
COL16A1-216ENST00000529928 LINC00337Q8N6G1 96 aa9.16□□□□□ -0.94
COL16A1-216ENST00000529928 Q8NDZ9 215 aa9.16□□□□□ -0.94
COL16A1-216ENST00000529928 TMEM126AQ9H061 195 aa9.16□□□□□ -0.94
COL16A1-216ENST00000529928 VPREB1P12018 145 aa9.15□□□□□ -0.94
COL16A1-216ENST00000529928 ASB16-AS1Q495Z4 193 aa9.15□□□□□ -0.94
COL16A1-216ENST00000529928 SFTA2Q6UW10 78 aa9.15□□□□□ -0.94
COL16A1-216ENST00000529928 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.94
COL16A1-216ENST00000529928 PLEKHB2Q96CS7 222 aa9.15□□□□□ -0.94
COL16A1-216ENST00000529928 LEPROTL1O95214 131 aa9.14□□□□□ -0.95
COL16A1-216ENST00000529928 TMEM238C9JI98 176 aa9.13□□□□□ -0.95
COL16A1-216ENST00000529928 CRCT1Q9UGL9 99 aa9.13□□□□□ -0.95
COL16A1-216ENST00000529928 KRTAP13-3Q3SY46 172 aa9.12□□□□□ -0.95
COL16A1-216ENST00000529928 M0R378 163 aa9.11□□□□□ -0.95
COL16A1-216ENST00000529928 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
COL16A1-216ENST00000529928 RPL24P83731 157 aaKnown RBP9.1□□□□□ -0.95
COL16A1-216ENST00000529928 HIGD2AQ9BW72 106 aa9.1□□□□□ -0.95
COL16A1-216ENST00000529928 H0Y8G0 127 aa9.09□□□□□ -0.95
COL16A1-216ENST00000529928 TSPEAR-AS2P59090 65 aa9.09□□□□□ -0.95
COL16A1-216ENST00000529928 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
COL16A1-216ENST00000529928 HIST1H2BKO60814 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST1H2BJP06899 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 FABP4P15090 132 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST1H2BOP23527 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST1H2BBP33778 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 LINC00158P58513 81 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST1H2BDP58876 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST1H2BCP62807 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST2H2BEQ16778 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST1H2BHQ93079 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST1H2BNQ99877 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HIST1H2BMQ99879 126 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 HSPB8Q9UJY1 196 aa9.08□□□□□ -0.96
COL16A1-216ENST00000529928 A0A0U1RRA0 63 aa9.07□□□□□ -0.96
COL16A1-216ENST00000529928 SMIM13P0DJ93 91 aa9.07□□□□□ -0.96
COL16A1-216ENST00000529928 SPRR4Q96PI1 79 aa9.07□□□□□ -0.96
COL16A1-216ENST00000529928 KRTAP4-1Q9BYQ7 146 aa9.07□□□□□ -0.96
COL16A1-216ENST00000529928 PLNP26678 52 aa9.06□□□□□ -0.96
COL16A1-216ENST00000529928 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
COL16A1-216ENST00000529928 NDUFA12Q9UI09 145 aa9.06□□□□□ -0.96
COL16A1-216ENST00000529928 DPM2O94777 84 aa9.05□□□□□ -0.96
COL16A1-216ENST00000529928 HERV-K104P63124 156 aa9.05□□□□□ -0.96
COL16A1-216ENST00000529928 ZNF706Q9Y5V0 76 aaPredicted RBP9.05□□□□□ -0.96
COL16A1-216ENST00000529928 LEPROTO15243 131 aa9.04□□□□□ -0.96
COL16A1-216ENST00000529928 SPINK1P00995 79 aa9.04□□□□□ -0.96
COL16A1-216ENST00000529928 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
COL16A1-216ENST00000529928 Q8NBF4 154 aa9.04□□□□□ -0.96
COL16A1-216ENST00000529928 MYMXA0A1B0GTQ4 84 aa9.03□□□□□ -0.96
COL16A1-216ENST00000529928 IGKCP01834 107 aa9.03□□□□□ -0.96
COL16A1-216ENST00000529928 DAND5Q8N907 189 aa9.03□□□□□ -0.96
COL16A1-216ENST00000529928 J3QQQ9 107 aa9.02□□□□□ -0.97
COL16A1-216ENST00000529928 MEIG1Q5JSS6 88 aa9.02□□□□□ -0.97
COL16A1-216ENST00000529928 LOC107984156A0A0G2JMH3 177 aa9.01□□□□□ -0.97
COL16A1-216ENST00000529928 ARL17AQ8IVW1 177 aa9.01□□□□□ -0.97
COL16A1-216ENST00000529928 MAP1LC3CQ9BXW4 147 aa9.01□□□□□ -0.97
COL16A1-216ENST00000529928 LINC00587B1AMM8 73 aa9□□□□□ -0.97
COL16A1-216ENST00000529928 BOD1L2Q8IYS8 172 aa9□□□□□ -0.97
COL16A1-216ENST00000529928 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
COL16A1-216ENST00000529928 NMUP48645 174 aa8.98□□□□□ -0.97
COL16A1-216ENST00000529928 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
COL16A1-216ENST00000529928 ATP6V1G1O75348 118 aa8.97□□□□□ -0.97
COL16A1-216ENST00000529928 HERVK_113P61574 105 aa8.97□□□□□ -0.97
COL16A1-216ENST00000529928 E9PLD3 99 aa8.96□□□□□ -0.98
COL16A1-216ENST00000529928 KRTAP4-16G5E9R7 235 aaPredicted RBP8.96□□□□□ -0.98
COL16A1-216ENST00000529928 NCR3O14931 201 aa8.96□□□□□ -0.98
COL16A1-216ENST00000529928 SPRR1AP35321 89 aa8.96□□□□□ -0.98
COL16A1-216ENST00000529928 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
COL16A1-216ENST00000529928 LINC01545Q5VT33 79 aa8.96□□□□□ -0.98
COL16A1-216ENST00000529928 KCNQ1DNQ9H478 68 aa8.96□□□□□ -0.98
COL16A1-216ENST00000529928 PRYO14603 147 aa8.95□□□□□ -0.98
COL16A1-216ENST00000529928 LGALS3P17931 250 aaKnown RBP8.95□□□□□ -0.98
COL16A1-216ENST00000529928 EIF4EBP3O60516 100 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms