RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
CTSB-215ENST00000528965 FABP4P15090 132 aa9.18□□□□□ -0.94
CTSB-215ENST00000528965 LINC00158P58513 81 aa9.18□□□□□ -0.94
CTSB-215ENST00000528965 COX17Q14061 63 aa9.18□□□□□ -0.94
CTSB-215ENST00000528965 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
CTSB-215ENST00000528965 SERF1AO75920 110 aa9.17□□□□□ -0.94
CTSB-215ENST00000528965 KRTAP13-1Q8IUC0 172 aa9.17□□□□□ -0.94
CTSB-215ENST00000528965 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
CTSB-215ENST00000528965 TMEM223A0PJW6 202 aa9.16□□□□□ -0.94
CTSB-215ENST00000528965 COLCA2A8K830 154 aa9.16□□□□□ -0.94
CTSB-215ENST00000528965 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
CTSB-215ENST00000528965 RPL24P83731 157 aaKnown RBP9.16□□□□□ -0.94
CTSB-215ENST00000528965 LINC00304Q8N9R0 145 aa9.16□□□□□ -0.94
CTSB-215ENST00000528965 MEIG1Q5JSS6 88 aa9.15□□□□□ -0.94
CTSB-215ENST00000528965 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.94
CTSB-215ENST00000528965 IGKV2D-26A0A0A0MRZ7 120 aa9.14□□□□□ -0.95
CTSB-215ENST00000528965 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
CTSB-215ENST00000528965 KRTAP13-2Q52LG2 175 aa9.13□□□□□ -0.95
CTSB-215ENST00000528965 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
CTSB-215ENST00000528965 LINC00587B1AMM8 73 aa9.12□□□□□ -0.95
CTSB-215ENST00000528965 PLNP26678 52 aa9.12□□□□□ -0.95
CTSB-215ENST00000528965 HERVK_113P61574 105 aa9.12□□□□□ -0.95
CTSB-215ENST00000528965 CTAG1AP78358 180 aa9.12□□□□□ -0.95
CTSB-215ENST00000528965 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
CTSB-215ENST00000528965 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
CTSB-215ENST00000528965 MYMXA0A1B0GTQ4 84 aa9.11□□□□□ -0.95
CTSB-215ENST00000528965 VPREB1P12018 145 aa9.11□□□□□ -0.95
CTSB-215ENST00000528965 HERV-K104P63124 156 aa9.11□□□□□ -0.95
CTSB-215ENST00000528965 PRLHP81277 87 aa9.11□□□□□ -0.95
CTSB-215ENST00000528965 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
CTSB-215ENST00000528965 SCO1O75880 301 aa9.1□□□□□ -0.95
CTSB-215ENST00000528965 DPM2O94777 84 aa9.1□□□□□ -0.95
CTSB-215ENST00000528965 MUC2Q02817 5179 aa9.1□□□□□ -0.95
CTSB-215ENST00000528965 SMIM13P0DJ93 91 aa9.09□□□□□ -0.95
CTSB-215ENST00000528965 PLEKHB2Q96CS7 222 aa9.09□□□□□ -0.95
CTSB-215ENST00000528965 RETNLBQ9BQ08 111 aa9.09□□□□□ -0.95
CTSB-215ENST00000528965 CDIP1Q9H305 208 aa9.09□□□□□ -0.95
CTSB-215ENST00000528965 NDUFA12Q9UI09 145 aa9.09□□□□□ -0.95
CTSB-215ENST00000528965 KRTAP9-6A0A140TA67 174 aa9.08□□□□□ -0.96
CTSB-215ENST00000528965 IGKCP01834 107 aa9.08□□□□□ -0.96
CTSB-215ENST00000528965 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
CTSB-215ENST00000528965 TMEM238C9JI98 176 aa9.07□□□□□ -0.96
CTSB-215ENST00000528965 LEPROTO15243 131 aa9.07□□□□□ -0.96
CTSB-215ENST00000528965 LGALS3P17931 250 aaKnown RBP9.07□□□□□ -0.96
CTSB-215ENST00000528965 PMCHL2Q9BQD1 86 aa9.07□□□□□ -0.96
CTSB-215ENST00000528965 IGLV7-46A0A075B6I9 117 aa9.06□□□□□ -0.96
CTSB-215ENST00000528965 M0R378 163 aa9.06□□□□□ -0.96
CTSB-215ENST00000528965 LINC00310P59036 64 aa9.06□□□□□ -0.96
CTSB-215ENST00000528965 S100A12P80511 92 aa9.05□□□□□ -0.96
CTSB-215ENST00000528965 J3QQQ9 107 aa9.04□□□□□ -0.96
CTSB-215ENST00000528965 BOD1L2Q8IYS8 172 aa9.04□□□□□ -0.96
CTSB-215ENST00000528965 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
CTSB-215ENST00000528965 HIGD2AQ9BW72 106 aa9.04□□□□□ -0.96
CTSB-215ENST00000528965 HIST1H2BKO60814 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST1H2BJP06899 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST1H2BOP23527 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST1H2BBP33778 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST1H2BDP58876 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST1H2BCP62807 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST2H2BEQ16778 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST1H2BHQ93079 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST1H2BNQ99877 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 HIST1H2BMQ99879 126 aa9.03□□□□□ -0.96
CTSB-215ENST00000528965 ZNF706Q9Y5V0 76 aaPredicted RBP9.03□□□□□ -0.96
CTSB-215ENST00000528965 NMUP48645 174 aa9.02□□□□□ -0.97
CTSB-215ENST00000528965 SPAG11AQ6PDA7 123 aa9.02□□□□□ -0.97
CTSB-215ENST00000528965 MIEN1Q9BRT3 115 aa9.02□□□□□ -0.97
CTSB-215ENST00000528965 NCR3O14931 201 aa9□□□□□ -0.97
CTSB-215ENST00000528965 C4orf48Q5BLP8 95 aa9□□□□□ -0.97
CTSB-215ENST00000528965 C3orf22Q8N5N4 141 aa9□□□□□ -0.97
CTSB-215ENST00000528965 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
CTSB-215ENST00000528965 Q8NDZ9 215 aa8.99□□□□□ -0.97
CTSB-215ENST00000528965 SPRR4Q96PI1 79 aa8.99□□□□□ -0.97
CTSB-215ENST00000528965 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
CTSB-215ENST00000528965 FP248Q71RG6 208 aaPredicted RBP8.98□□□□□ -0.97
CTSB-215ENST00000528965 PPDPFQ9H3Y8 114 aa8.98□□□□□ -0.97
CTSB-215ENST00000528965 PRYO14603 147 aa8.97□□□□□ -0.97
CTSB-215ENST00000528965 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
CTSB-215ENST00000528965 PET117Q6UWS5 81 aa8.97□□□□□ -0.97
CTSB-215ENST00000528965 DAND5Q8N907 189 aa8.97□□□□□ -0.97
CTSB-215ENST00000528965 KRTDAPP60985 99 aa8.96□□□□□ -0.98
CTSB-215ENST00000528965 ETDCA0A1B0GVM5 59 aa8.95□□□□□ -0.98
CTSB-215ENST00000528965 C20orf202A1L168 122 aa8.95□□□□□ -0.98
CTSB-215ENST00000528965 E9PLD3 99 aa8.95□□□□□ -0.98
CTSB-215ENST00000528965 S100A7L2Q5SY68 101 aa8.94□□□□□ -0.98
CTSB-215ENST00000528965 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
CTSB-215ENST00000528965 NPC2P61916 151 aa8.93□□□□□ -0.98
CTSB-215ENST00000528965 FAT4Q6V0I7 4981 aa8.92□□□□□ -0.98
CTSB-215ENST00000528965 S100A1P23297 94 aa8.92□□□□□ -0.98
CTSB-215ENST00000528965 LINC01545Q5VT33 79 aa8.92□□□□□ -0.98
CTSB-215ENST00000528965 Q8NBF4 154 aa8.92□□□□□ -0.98
CTSB-215ENST00000528965 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
CTSB-215ENST00000528965 C3orf79P0CE67 100 aa8.91□□□□□ -0.98
CTSB-215ENST00000528965 DDTP30046 118 aa8.91□□□□□ -0.98
CTSB-215ENST00000528965 KCNQ1DNQ9H478 68 aa8.91□□□□□ -0.98
CTSB-215ENST00000528965 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.98
CTSB-215ENST00000528965 SPINK1P00995 79 aa8.9□□□□□ -0.98
CTSB-215ENST00000528965 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
CTSB-215ENST00000528965 MUC17Q685J3 4493 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms