RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SPANXCQ9NY87 97 aa5.45□□□□□ -1.54
SSBP3-212ENST00000528930 TP73-AS1Q9UF72 201 aa5.45□□□□□ -1.54
SSBP3-212ENST00000528930 VCYO14598 125 aa5.44□□□□□ -1.54
SSBP3-212ENST00000528930 NMUP48645 174 aa5.44□□□□□ -1.54
SSBP3-212ENST00000528930 SUMO2P61956 95 aaKnown RBP5.44□□□□□ -1.54
SSBP3-212ENST00000528930 ETDBQ3ZM63 59 aa5.44□□□□□ -1.54
SSBP3-212ENST00000528930 DGAT2L7PQ6IED9 249 aa5.44□□□□□ -1.54
SSBP3-212ENST00000528930 IGKV3OR2-268A0A0C4DH90 116 aa5.43□□□□□ -1.54
SSBP3-212ENST00000528930 APOMO95445 188 aa5.43□□□□□ -1.54
SSBP3-212ENST00000528930 PPP1R17O96001 155 aa5.43□□□□□ -1.54
SSBP3-212ENST00000528930 SPINK8P0C7L1 97 aa5.43□□□□□ -1.54
SSBP3-212ENST00000528930 UBE2D1P51668 147 aa5.43□□□□□ -1.54
SSBP3-212ENST00000528930 PAPPA-AS1Q5QFB9 102 aa5.43□□□□□ -1.54
SSBP3-212ENST00000528930 TEN1Q86WV5 123 aa5.43□□□□□ -1.54
SSBP3-212ENST00000528930 C9orf163Q8N9P6 203 aa5.43□□□□□ -1.54
SSBP3-212ENST00000528930 CDC42SE2Q9NRR3 84 aa5.43□□□□□ -1.54
SSBP3-212ENST00000528930 NHP2Q9NX24 153 aaKnown RBP5.43□□□□□ -1.54
SSBP3-212ENST00000528930 MYMXA0A1B0GTQ4 84 aa5.42□□□□□ -1.54
SSBP3-212ENST00000528930 TNFRSF6BO95407 300 aa5.42□□□□□ -1.54
SSBP3-212ENST00000528930 CNBPP62633 177 aaKnown RBP5.42□□□□□ -1.54
SSBP3-212ENST00000528930 RPL32P62910 135 aaKnown RBP5.42□□□□□ -1.54
SSBP3-212ENST00000528930 ZC2HC1BQ5TFG8 222 aa5.42□□□□□ -1.54
SSBP3-212ENST00000528930 Q6ZUT4 128 aa5.42□□□□□ -1.54
SSBP3-212ENST00000528930 SCXQ7RTU7 201 aa5.42□□□□□ -1.54
SSBP3-212ENST00000528930 C15orf56Q8N910 161 aa5.42□□□□□ -1.54
SSBP3-212ENST00000528930 CHCHD10Q8WYQ3 142 aaPredicted RBP5.42□□□□□ -1.54
SSBP3-212ENST00000528930 C20orf78Q9BR46 151 aa5.42□□□□□ -1.54
SSBP3-212ENST00000528930 IGKV2D-26A0A0A0MRZ7 120 aa5.41□□□□□ -1.54
SSBP3-212ENST00000528930 LINC00959A0A1B0GUT2 108 aa5.41□□□□□ -1.54
SSBP3-212ENST00000528930 NPYP01303 97 aa5.41□□□□□ -1.54
SSBP3-212ENST00000528930 SDIM1Q6ZPB5 146 aa5.41□□□□□ -1.54
SSBP3-212ENST00000528930 TMEM101Q96IK0 257 aa5.41□□□□□ -1.54
SSBP3-212ENST00000528930 KIR2DL4Q99706 377 aa5.41□□□□□ -1.54
SSBP3-212ENST00000528930 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
SSBP3-212ENST00000528930 F8VRH5 84 aa5.4□□□□□ -1.54
SSBP3-212ENST00000528930 ORMDL2Q53FV1 153 aa5.4□□□□□ -1.54
SSBP3-212ENST00000528930 CIRBP-AS1Q8TBR5 109 aa5.4□□□□□ -1.54
SSBP3-212ENST00000528930 HIST1H4GQ99525 98 aa5.4□□□□□ -1.54
SSBP3-212ENST00000528930 SMIM2Q9BVW6 85 aa5.4□□□□□ -1.54
SSBP3-212ENST00000528930 CSDC2Q9Y534 153 aaKnown RBP5.4□□□□□ -1.54
SSBP3-212ENST00000528930 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
SSBP3-212ENST00000528930 PANO1I0J062 215 aa5.39□□□□□ -1.55
SSBP3-212ENST00000528930 FAM104AQ969W3 186 aa5.39□□□□□ -1.55
SSBP3-212ENST00000528930 NAA38Q9BRA0 125 aaKnown RBP5.39□□□□□ -1.55
SSBP3-212ENST00000528930 XCL1P47992 114 aa5.38□□□□□ -1.55
SSBP3-212ENST00000528930 RPL39P62891 51 aaKnown RBP5.38□□□□□ -1.55
SSBP3-212ENST00000528930 CIRBPQ14011 172 aaKnown RBP5.38□□□□□ -1.55
SSBP3-212ENST00000528930 RNASE13Q5GAN3 156 aaKnown RBP5.38□□□□□ -1.55
SSBP3-212ENST00000528930 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
SSBP3-212ENST00000528930 TIMM21Q9BVV7 248 aa5.38□□□□□ -1.55
SSBP3-212ENST00000528930 GVQW2A0A096LPI5 108 aaPredicted RBP5.37□□□□□ -1.55
SSBP3-212ENST00000528930 K7ERJ3 54 aa5.37□□□□□ -1.55
SSBP3-212ENST00000528930 SCGB1C2P0DMR2 95 aa5.37□□□□□ -1.55
SSBP3-212ENST00000528930 RPL13AP40429 203 aaKnown RBP5.37□□□□□ -1.55
SSBP3-212ENST00000528930 SS18Q15532 418 aa5.37□□□□□ -1.55
SSBP3-212ENST00000528930 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
SSBP3-212ENST00000528930 CD164L2Q6UWJ8 174 aa5.37□□□□□ -1.55
SSBP3-212ENST00000528930 TOMM6Q96B49 74 aa5.37□□□□□ -1.55
SSBP3-212ENST00000528930 CARD19Q96LW7 228 aa5.37□□□□□ -1.55
SSBP3-212ENST00000528930 TMEM126AQ9H061 195 aa5.37□□□□□ -1.55
SSBP3-212ENST00000528930 MRPL35Q9NZE8 188 aaKnown RBP5.37□□□□□ -1.55
SSBP3-212ENST00000528930 IGHV3-64A0A075B6Q5 118 aa5.36□□□□□ -1.55
SSBP3-212ENST00000528930 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-212ENST00000528930 FAM240AA0A1B0GVK7 77 aa5.36□□□□□ -1.55
SSBP3-212ENST00000528930 MT-ATP8P03928 68 aa5.36□□□□□ -1.55
SSBP3-212ENST00000528930 GAGE2BQ13066 116 aa5.36□□□□□ -1.55
SSBP3-212ENST00000528930 GAGE2EQ4V326 116 aa5.36□□□□□ -1.55
SSBP3-212ENST00000528930 OPRPNQ99935 248 aaPredicted RBP5.36□□□□□ -1.55
SSBP3-212ENST00000528930 GAGE2DQ9UEU5 116 aa5.36□□□□□ -1.55
SSBP3-212ENST00000528930 IGHV1-58A0A0C4DH39 117 aa5.35□□□□□ -1.55
SSBP3-212ENST00000528930 CHTF8P0CG12 524 aa5.35□□□□□ -1.55
SSBP3-212ENST00000528930 HERVK_113P61574 105 aa5.35□□□□□ -1.55
SSBP3-212ENST00000528930 MRPS36P82909 103 aaKnown RBP5.35□□□□□ -1.55
SSBP3-212ENST00000528930 LINC00526Q96FQ7 95 aa5.35□□□□□ -1.55
SSBP3-212ENST00000528930 IMUPQ9GZP8 106 aa5.35□□□□□ -1.55
SSBP3-212ENST00000528930 TRAV13-1A0A0B4J241 112 aa5.34□□□□□ -1.55
SSBP3-212ENST00000528930 A0A0B4J2C4 111 aa5.34□□□□□ -1.55
SSBP3-212ENST00000528930 IFITM1P13164 125 aa5.34□□□□□ -1.55
SSBP3-212ENST00000528930 NDUFV3P56181 108 aaKnown RBP5.34□□□□□ -1.55
SSBP3-212ENST00000528930 COX6A2Q02221 97 aa5.34□□□□□ -1.55
SSBP3-212ENST00000528930 Q6ZRU5 148 aa5.34□□□□□ -1.55
SSBP3-212ENST00000528930 SPACA4Q8TDM5 124 aa5.34□□□□□ -1.55
SSBP3-212ENST00000528930 TMEM141Q96I45 108 aa5.34□□□□□ -1.55
SSBP3-212ENST00000528930 A0A087WYN8 130 aa5.33□□□□□ -1.56
SSBP3-212ENST00000528930 COX7A2LO14548 114 aa5.33□□□□□ -1.56
SSBP3-212ENST00000528930 C5orf38Q86SI9 138 aa5.33□□□□□ -1.56
SSBP3-212ENST00000528930 PRO1854Q9UHT4 67 aa5.33□□□□□ -1.56
SSBP3-212ENST00000528930 PYGO1Q9Y3Y4 419 aa5.33□□□□□ -1.56
SSBP3-212ENST00000528930 IGLV4-3A0A075B6K6 122 aa5.32□□□□□ -1.56
SSBP3-212ENST00000528930 IGHV3OR16-9A0A0B4J2B5 98 aa5.32□□□□□ -1.56
SSBP3-212ENST00000528930 C11orf86A6NJI1 115 aa5.32□□□□□ -1.56
SSBP3-212ENST00000528930 ZNF561-AS1K7EIQ3 104 aa5.32□□□□□ -1.56
SSBP3-212ENST00000528930 SNCGO76070 127 aa5.32□□□□□ -1.56
SSBP3-212ENST00000528930 ACYP1P07311 99 aa5.32□□□□□ -1.56
SSBP3-212ENST00000528930 PSMB2P49721 201 aa5.32□□□□□ -1.56
SSBP3-212ENST00000528930 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.56
SSBP3-212ENST00000528930 SCGB3A1Q96QR1 104 aa5.32□□□□□ -1.56
SSBP3-212ENST00000528930 PLAC8Q9NZF1 115 aa5.32□□□□□ -1.56
SSBP3-212ENST00000528930 IGLV4-69A0A075B6H9 119 aa5.31□□□□□ -1.56
SSBP3-212ENST00000528930 A0A096LNI7 61 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms