RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 BAALC-AS2P0C853 105 aa9.82□□□□□ -0.84
ECHDC1-220ENST00000528402 LINC00526Q96FQ7 95 aa9.82□□□□□ -0.84
ECHDC1-220ENST00000528402 HIGD2BQ4VC39 106 aa9.81□□□□□ -0.84
ECHDC1-220ENST00000528402 SIGMAR1Q99720 223 aa9.81□□□□□ -0.84
ECHDC1-220ENST00000528402 TENM3Q9P273 2699 aa9.8□□□□□ -0.84
ECHDC1-220ENST00000528402 ANK2Q01484 3957 aa9.8□□□□□ -0.84
ECHDC1-220ENST00000528402 NOTCH1P46531 2555 aa9.8□□□□□ -0.84
ECHDC1-220ENST00000528402 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
ECHDC1-220ENST00000528402 FAM218AQ96MZ4 157 aa9.8□□□□□ -0.84
ECHDC1-220ENST00000528402 SYCNQ0VAF6 134 aa9.79□□□□□ -0.84
ECHDC1-220ENST00000528402 TEX49A0A1B0GTD5 131 aa9.78□□□□□ -0.84
ECHDC1-220ENST00000528402 PRR3P79522 188 aaKnown RBP9.78□□□□□ -0.84
ECHDC1-220ENST00000528402 Q6ZRU5 148 aa9.78□□□□□ -0.84
ECHDC1-220ENST00000528402 IGLV6-57P01721 117 aa9.77□□□□□ -0.85
ECHDC1-220ENST00000528402 Q9HAA7 133 aa9.77□□□□□ -0.85
ECHDC1-220ENST00000528402 NCR3O14931 201 aa9.76□□□□□ -0.85
ECHDC1-220ENST00000528402 A0A087WYN8 130 aa9.75□□□□□ -0.85
ECHDC1-220ENST00000528402 FAM240AA0A1B0GVK7 77 aa9.75□□□□□ -0.85
ECHDC1-220ENST00000528402 H3BQ85 93 aa9.75□□□□□ -0.85
ECHDC1-220ENST00000528402 TLX1NBP0CAT3 122 aa9.75□□□□□ -0.85
ECHDC1-220ENST00000528402 INAFM2P0DMQ5 153 aa9.75□□□□□ -0.85
ECHDC1-220ENST00000528402 LINC00167Q96N53 147 aa9.75□□□□□ -0.85
ECHDC1-220ENST00000528402 M0R378 163 aa9.74□□□□□ -0.85
ECHDC1-220ENST00000528402 LECT2O14960 151 aa9.74□□□□□ -0.85
ECHDC1-220ENST00000528402 ACYP1P07311 99 aa9.74□□□□□ -0.85
ECHDC1-220ENST00000528402 ORMDL1Q9P0S3 153 aa9.74□□□□□ -0.85
ECHDC1-220ENST00000528402 APLNQ9ULZ1 77 aa9.74□□□□□ -0.85
ECHDC1-220ENST00000528402 NBEAL1Q6ZS30 2694 aa9.74□□□□□ -0.85
ECHDC1-220ENST00000528402 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
ECHDC1-220ENST00000528402 RPL18AQ02543 176 aaKnown RBP9.73□□□□□ -0.85
ECHDC1-220ENST00000528402 Q8N814 137 aa9.73□□□□□ -0.85
ECHDC1-220ENST00000528402 CDIP1Q9H305 208 aa9.73□□□□□ -0.85
ECHDC1-220ENST00000528402 TRBV7-6A0A0J9YX20 115 aa9.73□□□□□ -0.85
ECHDC1-220ENST00000528402 Q8NDZ9 215 aa9.73□□□□□ -0.85
ECHDC1-220ENST00000528402 MGAM2Q2M2H8 2515 aa9.72□□□□□ -0.85
ECHDC1-220ENST00000528402 NUPR2A6NF83 97 aa9.72□□□□□ -0.85
ECHDC1-220ENST00000528402 USP17L23D6RBM5 183 aa9.72□□□□□ -0.85
ECHDC1-220ENST00000528402 VPREB1P12018 145 aa9.72□□□□□ -0.85
ECHDC1-220ENST00000528402 C6orf99Q4VX62 202 aa9.72□□□□□ -0.85
ECHDC1-220ENST00000528402 XAGE1AQ9HD64 81 aa9.72□□□□□ -0.85
ECHDC1-220ENST00000528402 TMEM256-PLSCR3K7ERE1 68 aa9.71□□□□□ -0.86
ECHDC1-220ENST00000528402 GHRHP01286 108 aa9.71□□□□□ -0.86
ECHDC1-220ENST00000528402 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.86
ECHDC1-220ENST00000528402 PLA2G2DQ9UNK4 145 aa9.71□□□□□ -0.86
ECHDC1-220ENST00000528402 HUWE1Q7Z6Z7 4374 aaKnown RBP9.7□□□□□ -0.86
ECHDC1-220ENST00000528402 TRAV23DV6A0A075B6W5 121 aa9.7□□□□□ -0.86
ECHDC1-220ENST00000528402 LINC00575Q6W349 94 aa9.7□□□□□ -0.86
ECHDC1-220ENST00000528402 PCP4P48539 62 aa9.69□□□□□ -0.86
ECHDC1-220ENST00000528402 Q6ZRP5 223 aa9.69□□□□□ -0.86
ECHDC1-220ENST00000528402 DIRC1Q969H9 104 aa9.69□□□□□ -0.86
ECHDC1-220ENST00000528402 TRBV10-3A0A0K0K1G6 114 aa9.68□□□□□ -0.86
ECHDC1-220ENST00000528402 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
ECHDC1-220ENST00000528402 OBSCN-AS1Q96MR7 158 aa9.68□□□□□ -0.86
ECHDC1-220ENST00000528402 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
ECHDC1-220ENST00000528402 C22orf24Q9Y442 160 aa9.68□□□□□ -0.86
ECHDC1-220ENST00000528402 hADV29S1A0JD25 119 aa9.67□□□□□ -0.86
ECHDC1-220ENST00000528402 JMJD7-PLA2G4BH0Y9G9 81 aa9.67□□□□□ -0.86
ECHDC1-220ENST00000528402 ZNF73O43830 326 aaPredicted RBP9.66□□□□□ -0.86
ECHDC1-220ENST00000528402 C14orf177Q52M58 125 aa9.65□□□□□ -0.86
ECHDC1-220ENST00000528402 COX7BP24311 80 aa9.65□□□□□ -0.87
ECHDC1-220ENST00000528402 TTC32Q5I0X7 151 aa9.65□□□□□ -0.87
ECHDC1-220ENST00000528402 IGLV5-37A0A075B6J1 123 aa9.64□□□□□ -0.87
ECHDC1-220ENST00000528402 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
ECHDC1-220ENST00000528402 C9orf129Q5T035 196 aaKnown RBP9.64□□□□□ -0.87
ECHDC1-220ENST00000528402 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
ECHDC1-220ENST00000528402 SLPIP03973 132 aa9.62□□□□□ -0.87
ECHDC1-220ENST00000528402 XGP55808 180 aa9.62□□□□□ -0.87
ECHDC1-220ENST00000528402 ELOF1P60002 83 aaKnown RBP9.62□□□□□ -0.87
ECHDC1-220ENST00000528402 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-220ENST00000528402 PSCAO43653 123 aa9.61□□□□□ -0.87
ECHDC1-220ENST00000528402 CASC10Q5T4H9 136 aa9.61□□□□□ -0.87
ECHDC1-220ENST00000528402 KCNQ1DNQ9H478 68 aa9.61□□□□□ -0.87
ECHDC1-220ENST00000528402 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
ECHDC1-220ENST00000528402 MT-ATP8P03928 68 aa9.59□□□□□ -0.87
ECHDC1-220ENST00000528402 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
ECHDC1-220ENST00000528402 C21orf62-AS1Q17RA5 79 aa9.58□□□□□ -0.88
ECHDC1-220ENST00000528402 Q6Q795 121 aa9.58□□□□□ -0.88
ECHDC1-220ENST00000528402 DNAH9Q9NYC9 4486 aa9.57□□□□□ -0.88
ECHDC1-220ENST00000528402 NBDYA0A0U1RRE5 68 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 KRTAP21-3Q3LHN1 58 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 SDIM1Q6ZPB5 146 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 C7orf33Q8WU49 177 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 KRTAP1-5Q9BYS1 174 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 PRYO14603 147 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 PDE6GP18545 87 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 GAGE2BQ13066 116 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 GAGE2AQ6NT46 116 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 LINC00643Q86TS7 51 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 LINC00528Q8N1L1 170 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 C14orf132Q9NPU4 83 aa9.56□□□□□ -0.88
ECHDC1-220ENST00000528402 CCKP06307 115 aa9.55□□□□□ -0.88
ECHDC1-220ENST00000528402 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
ECHDC1-220ENST00000528402 Q6ZQY7 126 aa9.54□□□□□ -0.88
ECHDC1-220ENST00000528402 IGLV1-50A0A075B6I6 118 aa9.53□□□□□ -0.88
ECHDC1-220ENST00000528402 C16orf90A8MZG2 172 aa9.53□□□□□ -0.88
ECHDC1-220ENST00000528402 RBM3P98179 157 aaKnown RBP9.53□□□□□ -0.88
ECHDC1-220ENST00000528402 IMUPQ9GZP8 106 aa9.53□□□□□ -0.88
ECHDC1-220ENST00000528402 DHRS4-AS1Q9P1J3 65 aa9.52□□□□□ -0.89
ECHDC1-220ENST00000528402 LAMTOR3Q9UHA4 124 aa9.52□□□□□ -0.89
ECHDC1-220ENST00000528402 STAB2Q8WWQ8 2551 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms