RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 J3QQQ9 107 aa8.08□□□□□ -1.12
SCN3B-205ENST00000528267 CXCL5P42830 114 aa8.08□□□□□ -1.12
SCN3B-205ENST00000528267 GAGE2EQ4V326 116 aa8.08□□□□□ -1.12
SCN3B-205ENST00000528267 GAGE2DQ9UEU5 116 aa8.08□□□□□ -1.12
SCN3B-205ENST00000528267 MYMXA0A1B0GTQ4 84 aa8.07□□□□□ -1.12
SCN3B-205ENST00000528267 ZNF815PA8K554 130 aa8.07□□□□□ -1.12
SCN3B-205ENST00000528267 NDUFC2-KCTD14E9PQ53 114 aa8.07□□□□□ -1.12
SCN3B-205ENST00000528267 C2orf91Q6ZV80 131 aa8.07□□□□□ -1.12
SCN3B-205ENST00000528267 ZNF625Q96I27 306 aaPredicted RBP8.07□□□□□ -1.12
SCN3B-205ENST00000528267 CTAG1AP78358 180 aa8.06□□□□□ -1.12
SCN3B-205ENST00000528267 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
SCN3B-205ENST00000528267 PKIGQ9Y2B9 76 aa8.05□□□□□ -1.12
SCN3B-205ENST00000528267 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
SCN3B-205ENST00000528267 KRTAP11-1Q8IUC1 163 aa8.04□□□□□ -1.12
SCN3B-205ENST00000528267 DPH3Q96FX2 82 aa8.04□□□□□ -1.12
SCN3B-205ENST00000528267 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
SCN3B-205ENST00000528267 HIGD1BQ9P298 99 aa8.04□□□□□ -1.12
SCN3B-205ENST00000528267 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
SCN3B-205ENST00000528267 LRP1Q07954 4544 aaKnown RBP8.03□□□□□ -1.12
SCN3B-205ENST00000528267 SRRM2Q9UQ35 2752 aaKnown RBP8.03□□□□□ -1.12
SCN3B-205ENST00000528267 SERTAD4-AS1Q5TG53 156 aa8.03□□□□□ -1.12
SCN3B-205ENST00000528267 SCGB1D4Q6XE38 83 aa8.03□□□□□ -1.12
SCN3B-205ENST00000528267 PHF5AQ7RTV0 110 aaKnown RBP8.03□□□□□ -1.12
SCN3B-205ENST00000528267 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
SCN3B-205ENST00000528267 FAM229AH3BQW9 127 aa8.01□□□□□ -1.13
SCN3B-205ENST00000528267 PFN2P35080 140 aa8.01□□□□□ -1.13
SCN3B-205ENST00000528267 FAM19A5Q7Z5A7 132 aaPredicted RBP8.01□□□□□ -1.13
SCN3B-205ENST00000528267 Q8NDZ9 215 aa8.01□□□□□ -1.13
SCN3B-205ENST00000528267 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
SCN3B-205ENST00000528267 M0R143 59 aa8□□□□□ -1.13
SCN3B-205ENST00000528267 RPL37AP61513 92 aaKnown RBP8□□□□□ -1.13
SCN3B-205ENST00000528267 HSD52Q0P140 79 aa8□□□□□ -1.13
SCN3B-205ENST00000528267 A0A0J9YXY3 114 aa7.99□□□□□ -1.13
SCN3B-205ENST00000528267 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
SCN3B-205ENST00000528267 A0A0U1RRA0 63 aa7.98□□□□□ -1.13
SCN3B-205ENST00000528267 BATFQ16520 125 aa7.98□□□□□ -1.13
SCN3B-205ENST00000528267 TAL2Q16559 108 aa7.98□□□□□ -1.13
SCN3B-205ENST00000528267 SNHG12Q9BXW3 62 aa7.98□□□□□ -1.13
SCN3B-205ENST00000528267 PLA2G1BP04054 148 aaKnown RBP7.97□□□□□ -1.13
SCN3B-205ENST00000528267 SMIM13P0DJ93 91 aa7.97□□□□□ -1.13
SCN3B-205ENST00000528267 HERV-K104P63124 156 aa7.97□□□□□ -1.13
SCN3B-205ENST00000528267 PRR3P79522 188 aaKnown RBP7.97□□□□□ -1.13
SCN3B-205ENST00000528267 HIST1H4GQ99525 98 aa7.97□□□□□ -1.13
SCN3B-205ENST00000528267 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
SCN3B-205ENST00000528267 SPANXB1Q9NS25 103 aaPredicted RBP7.97□□□□□ -1.13
SCN3B-205ENST00000528267 TMEM238C9JI98 176 aa7.96□□□□□ -1.14
SCN3B-205ENST00000528267 M0QXV9 152 aa7.96□□□□□ -1.14
SCN3B-205ENST00000528267 SRSF9Q13242 221 aaKnown RBP eCLIP7.96□□□□□ -1.14
SCN3B-205ENST00000528267 BVES-AS1Q5T3Y7 98 aa7.96□□□□□ -1.14
SCN3B-205ENST00000528267 SFTA2Q6UW10 78 aa7.96□□□□□ -1.14
SCN3B-205ENST00000528267 FLG2Q5D862 2391 aaPredicted RBP7.96□□□□□ -1.14
SCN3B-205ENST00000528267 TIMM17BO60830 172 aa7.95□□□□□ -1.14
SCN3B-205ENST00000528267 INAFM2P0DMQ5 153 aa7.95□□□□□ -1.14
SCN3B-205ENST00000528267 COX17Q14061 63 aa7.95□□□□□ -1.14
SCN3B-205ENST00000528267 CEND1Q8N111 149 aa7.95□□□□□ -1.14
SCN3B-205ENST00000528267 C7orf33Q8WU49 177 aa7.95□□□□□ -1.14
SCN3B-205ENST00000528267 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
SCN3B-205ENST00000528267 VPREB1P12018 145 aa7.94□□□□□ -1.14
SCN3B-205ENST00000528267 MEIG1Q5JSS6 88 aa7.94□□□□□ -1.14
SCN3B-205ENST00000528267 PSORS1C2Q9UIG4 136 aa7.94□□□□□ -1.14
SCN3B-205ENST00000528267 PLA2G2DQ9UNK4 145 aa7.94□□□□□ -1.14
SCN3B-205ENST00000528267 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
SCN3B-205ENST00000528267 LINC00158P58513 81 aa7.93□□□□□ -1.14
SCN3B-205ENST00000528267 MIR7-3HGQ8N6C7 128 aa7.93□□□□□ -1.14
SCN3B-205ENST00000528267 DAND5Q8N907 189 aa7.93□□□□□ -1.14
SCN3B-205ENST00000528267 LITAFQ99732 161 aa7.93□□□□□ -1.14
SCN3B-205ENST00000528267 SPANXDQ9BXN6 97 aa7.93□□□□□ -1.14
SCN3B-205ENST00000528267 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
SCN3B-205ENST00000528267 EIF4EBP3O60516 100 aaPredicted RBP7.91□□□□□ -1.14
SCN3B-205ENST00000528267 FXYD2P54710 66 aa7.91□□□□□ -1.14
SCN3B-205ENST00000528267 LBHQ53QV2 105 aaPredicted RBP7.91□□□□□ -1.14
SCN3B-205ENST00000528267 COL5A1-AS1Q5SY13 56 aa7.91□□□□□ -1.14
SCN3B-205ENST00000528267 ADAMTSL4-AS1Q5T5F5 129 aa7.91□□□□□ -1.14
SCN3B-205ENST00000528267 Q6ZVH6 145 aa7.91□□□□□ -1.14
SCN3B-205ENST00000528267 TNXBP22105 4242 aa7.9□□□□□ -1.14
SCN3B-205ENST00000528267 A6NDN8 102 aa7.9□□□□□ -1.14
SCN3B-205ENST00000528267 SOSTDC1Q6X4U4 206 aa7.9□□□□□ -1.14
SCN3B-205ENST00000528267 MRPL55Q7Z7F7 128 aaKnown RBP7.9□□□□□ -1.14
SCN3B-205ENST00000528267 LINC00167Q96N53 147 aa7.9□□□□□ -1.14
SCN3B-205ENST00000528267 GAGE10A6NGK3 116 aa7.89□□□□□ -1.15
SCN3B-205ENST00000528267 MUSTN1Q8IVN3 82 aa7.89□□□□□ -1.15
SCN3B-205ENST00000528267 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
SCN3B-205ENST00000528267 A6NJY4 79 aa7.88□□□□□ -1.15
SCN3B-205ENST00000528267 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
SCN3B-205ENST00000528267 IFITM1P13164 125 aa7.88□□□□□ -1.15
SCN3B-205ENST00000528267 C1orf137Q5JT78 98 aa7.88□□□□□ -1.15
SCN3B-205ENST00000528267 NPC2P61916 151 aa7.87□□□□□ -1.15
SCN3B-205ENST00000528267 UBE2BP63146 152 aa7.87□□□□□ -1.15
SCN3B-205ENST00000528267 RPL24P83731 157 aaKnown RBP7.87□□□□□ -1.15
SCN3B-205ENST00000528267 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
SCN3B-205ENST00000528267 NHP2Q9NX24 153 aaKnown RBP7.87□□□□□ -1.15
SCN3B-205ENST00000528267 LOC107984156A0A0G2JMH3 177 aa7.86□□□□□ -1.15
SCN3B-205ENST00000528267 ARL17AQ8IVW1 177 aa7.86□□□□□ -1.15
SCN3B-205ENST00000528267 LINC00308Q8TCZ7 52 aa7.86□□□□□ -1.15
SCN3B-205ENST00000528267 A4D1N5 150 aa7.85□□□□□ -1.15
SCN3B-205ENST00000528267 NKAPP1Q8N9T2 125 aa7.85□□□□□ -1.15
SCN3B-205ENST00000528267 HERC1Q15751 4861 aa7.85□□□□□ -1.15
SCN3B-205ENST00000528267 IGLV1-50A0A075B6I6 118 aa7.84□□□□□ -1.15
SCN3B-205ENST00000528267 IGKV2-28A0A075B6P5 120 aa7.84□□□□□ -1.15
SCN3B-205ENST00000528267 A0A1B0GWB2 263 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms