RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
NEDD8-205ENST00000527046 NMUP48645 174 aa6.71□□□□□ -1.34
NEDD8-205ENST00000527046 PYY3Q5JQD4 70 aa6.71□□□□□ -1.34
NEDD8-205ENST00000527046 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
NEDD8-205ENST00000527046 PKIGQ9Y2B9 76 aa6.71□□□□□ -1.34
NEDD8-205ENST00000527046 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
NEDD8-205ENST00000527046 SCGB1D1O95968 90 aa6.7□□□□□ -1.34
NEDD8-205ENST00000527046 PHF5AQ7RTV0 110 aaKnown RBP6.7□□□□□ -1.34
NEDD8-205ENST00000527046 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
NEDD8-205ENST00000527046 LINC00158P58513 81 aa6.69□□□□□ -1.34
NEDD8-205ENST00000527046 SOSTDC1Q6X4U4 206 aa6.69□□□□□ -1.34
NEDD8-205ENST00000527046 MIR7-3HGQ8N6C7 128 aa6.69□□□□□ -1.34
NEDD8-205ENST00000527046 PCLOQ9Y6V0 5065 aa6.68□□□□□ -1.34
NEDD8-205ENST00000527046 IGLV5-37A0A075B6J1 123 aa6.68□□□□□ -1.34
NEDD8-205ENST00000527046 VPREB1P12018 145 aa6.68□□□□□ -1.34
NEDD8-205ENST00000527046 AKR1D1P51857 326 aa6.68□□□□□ -1.34
NEDD8-205ENST00000527046 FAM19A5Q7Z5A7 132 aaPredicted RBP6.68□□□□□ -1.34
NEDD8-205ENST00000527046 DAND5Q8N907 189 aa6.68□□□□□ -1.34
NEDD8-205ENST00000527046 TP73-AS1Q9UF72 201 aa6.68□□□□□ -1.34
NEDD8-205ENST00000527046 C22orf24Q9Y442 160 aa6.68□□□□□ -1.34
NEDD8-205ENST00000527046 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
NEDD8-205ENST00000527046 Q5VSD8 79 aa6.67□□□□□ -1.34
NEDD8-205ENST00000527046 HNRNPA3P51991 378 aaKnown RBP6.66□□□□□ -1.34
NEDD8-205ENST00000527046 PRR3P79522 188 aaKnown RBP6.66□□□□□ -1.34
NEDD8-205ENST00000527046 MEIG1Q5JSS6 88 aa6.66□□□□□ -1.34
NEDD8-205ENST00000527046 LINC00587B1AMM8 73 aa6.65□□□□□ -1.34
NEDD8-205ENST00000527046 TIMM17BO60830 172 aa6.65□□□□□ -1.34
NEDD8-205ENST00000527046 LINC00167Q96N53 147 aa6.65□□□□□ -1.34
NEDD8-205ENST00000527046 LOC105371267A0A1B0GV96 52 aa6.64□□□□□ -1.35
NEDD8-205ENST00000527046 M0QXV9 152 aa6.64□□□□□ -1.35
NEDD8-205ENST00000527046 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
NEDD8-205ENST00000527046 C7orf33Q8WU49 177 aa6.64□□□□□ -1.35
NEDD8-205ENST00000527046 FAM229AH3BQW9 127 aa6.63□□□□□ -1.35
NEDD8-205ENST00000527046 COX8AP10176 69 aa6.63□□□□□ -1.35
NEDD8-205ENST00000527046 PSORS1C2Q9UIG4 136 aa6.63□□□□□ -1.35
NEDD8-205ENST00000527046 SRSF9Q13242 221 aaKnown RBP eCLIP6.62□□□□□ -1.35
NEDD8-205ENST00000527046 MRPL55Q7Z7F7 128 aaKnown RBP6.62□□□□□ -1.35
NEDD8-205ENST00000527046 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
NEDD8-205ENST00000527046 IGLV1-50A0A075B6I6 118 aa6.61□□□□□ -1.35
NEDD8-205ENST00000527046 HSBP1L1C9JCN9 74 aa6.61□□□□□ -1.35
NEDD8-205ENST00000527046 DLEU1O43261 78 aa6.61□□□□□ -1.35
NEDD8-205ENST00000527046 RPL37AP61513 92 aaKnown RBP6.61□□□□□ -1.35
NEDD8-205ENST00000527046 SPATA45Q537H7 98 aa6.61□□□□□ -1.35
NEDD8-205ENST00000527046 C14orf144Q96I85 54 aa6.61□□□□□ -1.35
NEDD8-205ENST00000527046 SPANXDQ9BXN6 97 aa6.61□□□□□ -1.35
NEDD8-205ENST00000527046 SPANXCQ9NY87 97 aa6.61□□□□□ -1.35
NEDD8-205ENST00000527046 PAM16Q9Y3D7 125 aa6.61□□□□□ -1.35
NEDD8-205ENST00000527046 RPL37AP8A6NKH3 93 aa6.6□□□□□ -1.35
NEDD8-205ENST00000527046 NPC2P61916 151 aa6.6□□□□□ -1.35
NEDD8-205ENST00000527046 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
NEDD8-205ENST00000527046 GAGE10A6NGK3 116 aa6.59□□□□□ -1.35
NEDD8-205ENST00000527046 NDUFC2O95298 119 aa6.59□□□□□ -1.35
NEDD8-205ENST00000527046 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
NEDD8-205ENST00000527046 PLA2G1BP04054 148 aaKnown RBP6.59□□□□□ -1.35
NEDD8-205ENST00000527046 RPL24P83731 157 aaKnown RBP6.59□□□□□ -1.35
NEDD8-205ENST00000527046 C2orf91Q6ZV80 131 aa6.59□□□□□ -1.35
NEDD8-205ENST00000527046 VAMP8Q9BV40 100 aa6.59□□□□□ -1.35
NEDD8-205ENST00000527046 SRRM2Q9UQ35 2752 aaKnown RBP6.58□□□□□ -1.36
NEDD8-205ENST00000527046 M0R378 163 aa6.58□□□□□ -1.36
NEDD8-205ENST00000527046 LBHQ53QV2 105 aaPredicted RBP6.58□□□□□ -1.36
NEDD8-205ENST00000527046 SCGB1D4Q6XE38 83 aa6.58□□□□□ -1.36
NEDD8-205ENST00000527046 MUSTN1Q8IVN3 82 aa6.58□□□□□ -1.36
NEDD8-205ENST00000527046 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
NEDD8-205ENST00000527046 SPANXB1Q9NS25 103 aaPredicted RBP6.58□□□□□ -1.36
NEDD8-205ENST00000527046 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
NEDD8-205ENST00000527046 VPS13BQ7Z7G8 4022 aa6.56□□□□□ -1.36
NEDD8-205ENST00000527046 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
NEDD8-205ENST00000527046 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
NEDD8-205ENST00000527046 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
NEDD8-205ENST00000527046 NCR3O14931 201 aa6.56□□□□□ -1.36
NEDD8-205ENST00000527046 IGLV7-43P04211 117 aa6.56□□□□□ -1.36
NEDD8-205ENST00000527046 C1orf137Q5JT78 98 aa6.56□□□□□ -1.36
NEDD8-205ENST00000527046 KRTAP13-1Q8IUC0 172 aa6.56□□□□□ -1.36
NEDD8-205ENST00000527046 NKAPP1Q8N9T2 125 aa6.56□□□□□ -1.36
NEDD8-205ENST00000527046 KRTAP4-16G5E9R7 235 aaPredicted RBP6.55□□□□□ -1.36
NEDD8-205ENST00000527046 IGLV6-57P01721 117 aa6.55□□□□□ -1.36
NEDD8-205ENST00000527046 INAFM2P0DMQ5 153 aa6.55□□□□□ -1.36
NEDD8-205ENST00000527046 IFITM1P13164 125 aa6.55□□□□□ -1.36
NEDD8-205ENST00000527046 SPRR1AP35321 89 aa6.55□□□□□ -1.36
NEDD8-205ENST00000527046 UBE2BP63146 152 aa6.55□□□□□ -1.36
NEDD8-205ENST00000527046 Q6ZVH6 145 aa6.55□□□□□ -1.36
NEDD8-205ENST00000527046 KCNQ1DNQ9H478 68 aa6.55□□□□□ -1.36
NEDD8-205ENST00000527046 HIGD1BQ9P298 99 aa6.55□□□□□ -1.36
NEDD8-205ENST00000527046 SLC25A34Q6PIV7 304 aa6.54□□□□□ -1.36
NEDD8-205ENST00000527046 LINC00337Q8N6G1 96 aa6.54□□□□□ -1.36
NEDD8-205ENST00000527046 TMEM126AQ9H061 195 aa6.54□□□□□ -1.36
NEDD8-205ENST00000527046 BCE1O60756 84 aa6.53□□□□□ -1.36
NEDD8-205ENST00000527046 FLG2Q5D862 2391 aaPredicted RBP6.53□□□□□ -1.36
NEDD8-205ENST00000527046 MIEN1Q9BRT3 115 aa6.52□□□□□ -1.37
NEDD8-205ENST00000527046 DDTP30046 118 aa6.51□□□□□ -1.37
NEDD8-205ENST00000527046 REG3GQ6UW15 175 aa6.51□□□□□ -1.37
NEDD8-205ENST00000527046 SPINK6Q6UWN8 80 aa6.51□□□□□ -1.37
NEDD8-205ENST00000527046 LRP1Q07954 4544 aaKnown RBP6.5□□□□□ -1.37
NEDD8-205ENST00000527046 A4D1N5 150 aa6.5□□□□□ -1.37
NEDD8-205ENST00000527046 ZNF861PO60384 105 aa6.5□□□□□ -1.37
NEDD8-205ENST00000527046 SMIM6P0DI80 62 aa6.5□□□□□ -1.37
NEDD8-205ENST00000527046 PKHD1L1Q86WI1 4243 aa6.49□□□□□ -1.37
NEDD8-205ENST00000527046 PRYO14603 147 aa6.49□□□□□ -1.37
NEDD8-205ENST00000527046 LCE2BO14633 110 aa6.49□□□□□ -1.37
NEDD8-205ENST00000527046 KRTAP1-4P0C5Y4 121 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 784.5 ms