RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 A0A096LNI7 61 aa8.24□□□□□ -1.09
SMPD1-202ENST00000526280 TRBV30A0A0K0K1B3 111 aa8.24□□□□□ -1.09
SMPD1-202ENST00000526280 CKS1BP61024 79 aa8.24□□□□□ -1.09
SMPD1-202ENST00000526280 SPACA4Q8TDM5 124 aa8.24□□□□□ -1.09
SMPD1-202ENST00000526280 COX7B2Q8TF08 81 aa8.24□□□□□ -1.09
SMPD1-202ENST00000526280 IGKV2-24A0A0C4DH68 120 aa8.23□□□□□ -1.09
SMPD1-202ENST00000526280 H3BUT2 72 aa8.23□□□□□ -1.09
SMPD1-202ENST00000526280 CXCL5P42830 114 aa8.23□□□□□ -1.09
SMPD1-202ENST00000526280 KRTAP4-5Q9BYR2 181 aa8.23□□□□□ -1.09
SMPD1-202ENST00000526280 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
SMPD1-202ENST00000526280 LINC00474Q9P2X8 69 aa8.23□□□□□ -1.09
SMPD1-202ENST00000526280 TLX1NBP0CAT3 122 aa8.22□□□□□ -1.09
SMPD1-202ENST00000526280 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMPD1-202ENST00000526280 Q8N1X5 172 aa8.22□□□□□ -1.09
SMPD1-202ENST00000526280 DPH3Q96FX2 82 aa8.22□□□□□ -1.09
SMPD1-202ENST00000526280 SPANXB1Q9NS25 103 aaPredicted RBP8.22□□□□□ -1.09
SMPD1-202ENST00000526280 A0A087WYN8 130 aa8.21□□□□□ -1.1
SMPD1-202ENST00000526280 K7ERJ3 54 aa8.21□□□□□ -1.1
SMPD1-202ENST00000526280 SMR3BP02814 79 aaPredicted RBP8.21□□□□□ -1.1
SMPD1-202ENST00000526280 GAGE2BQ13066 116 aa8.21□□□□□ -1.1
SMPD1-202ENST00000526280 NAA38Q9BRA0 125 aaKnown RBP8.21□□□□□ -1.1
SMPD1-202ENST00000526280 A0A1B0GWB2 263 aa8.2□□□□□ -1.1
SMPD1-202ENST00000526280 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
SMPD1-202ENST00000526280 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
SMPD1-202ENST00000526280 C9orf116Q5BN46 136 aaPredicted RBP8.2□□□□□ -1.1
SMPD1-202ENST00000526280 RPL18AQ02543 176 aaKnown RBP8.19□□□□□ -1.1
SMPD1-202ENST00000526280 Q6ZRP5 223 aa8.19□□□□□ -1.1
SMPD1-202ENST00000526280 GTF2H5Q6ZYL4 71 aa8.19□□□□□ -1.1
SMPD1-202ENST00000526280 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
SMPD1-202ENST00000526280 FAT1Q14517 4588 aa8.19□□□□□ -1.1
SMPD1-202ENST00000526280 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
SMPD1-202ENST00000526280 A6NJY4 79 aa8.18□□□□□ -1.1
SMPD1-202ENST00000526280 NDUFC2-KCTD14E9PQ53 114 aa8.18□□□□□ -1.1
SMPD1-202ENST00000526280 K7EP34 96 aa8.18□□□□□ -1.1
SMPD1-202ENST00000526280 FABP2P12104 132 aa8.18□□□□□ -1.1
SMPD1-202ENST00000526280 A0A0J9YXY3 114 aa8.16□□□□□ -1.1
SMPD1-202ENST00000526280 EPM2AB3EWF7 344 aa8.16□□□□□ -1.1
SMPD1-202ENST00000526280 GAGE2EQ4V326 116 aa8.16□□□□□ -1.1
SMPD1-202ENST00000526280 GAGE2DQ9UEU5 116 aa8.16□□□□□ -1.1
SMPD1-202ENST00000526280 VPS13BQ7Z7G8 4022 aa8.15□□□□□ -1.1
SMPD1-202ENST00000526280 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
SMPD1-202ENST00000526280 LINC00528Q8N1L1 170 aa8.15□□□□□ -1.1
SMPD1-202ENST00000526280 ZNF625Q96I27 306 aaPredicted RBP8.15□□□□□ -1.1
SMPD1-202ENST00000526280 NDUFA12Q9UI09 145 aa8.15□□□□□ -1.1
SMPD1-202ENST00000526280 SPCS1Q9Y6A9 102 aa8.15□□□□□ -1.1
SMPD1-202ENST00000526280 A0A1W2PNN7 141 aa8.14□□□□□ -1.11
SMPD1-202ENST00000526280 Q5VSD8 79 aa8.14□□□□□ -1.11
SMPD1-202ENST00000526280 SFTA2Q6UW10 78 aa8.14□□□□□ -1.11
SMPD1-202ENST00000526280 PCLOQ9Y6V0 5065 aa8.13□□□□□ -1.11
SMPD1-202ENST00000526280 TMEM238C9JI98 176 aa8.13□□□□□ -1.11
SMPD1-202ENST00000526280 C9orf129Q5T035 196 aaKnown RBP8.12□□□□□ -1.11
SMPD1-202ENST00000526280 MUSTN1Q8IVN3 82 aa8.12□□□□□ -1.11
SMPD1-202ENST00000526280 FAM168BA1KXE4 195 aa8.11□□□□□ -1.11
SMPD1-202ENST00000526280 TIMM17BO60830 172 aa8.11□□□□□ -1.11
SMPD1-202ENST00000526280 CFC1BP0CG36 223 aa8.11□□□□□ -1.11
SMPD1-202ENST00000526280 CFC1P0CG37 223 aa8.11□□□□□ -1.11
SMPD1-202ENST00000526280 RPL24P83731 157 aaKnown RBP8.11□□□□□ -1.11
SMPD1-202ENST00000526280 COX17Q14061 63 aa8.11□□□□□ -1.11
SMPD1-202ENST00000526280 LITAFQ99732 161 aa8.11□□□□□ -1.11
SMPD1-202ENST00000526280 ERG28Q9UKR5 140 aa8.11□□□□□ -1.11
SMPD1-202ENST00000526280 ABCA13Q86UQ4 5058 aa8.1□□□□□ -1.11
SMPD1-202ENST00000526280 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
SMPD1-202ENST00000526280 PFN2P35080 140 aa8.1□□□□□ -1.11
SMPD1-202ENST00000526280 SPANXDQ9BXN6 97 aa8.1□□□□□ -1.11
SMPD1-202ENST00000526280 XAGE1AQ9HD64 81 aa8.1□□□□□ -1.11
SMPD1-202ENST00000526280 SPANXCQ9NY87 97 aa8.1□□□□□ -1.11
SMPD1-202ENST00000526280 A4D1N5 150 aa8.09□□□□□ -1.11
SMPD1-202ENST00000526280 TSPAN13O95857 204 aa8.09□□□□□ -1.11
SMPD1-202ENST00000526280 HERV-K104P63124 156 aa8.09□□□□□ -1.11
SMPD1-202ENST00000526280 ADAMTSL4-AS1Q5T5F5 129 aa8.09□□□□□ -1.11
SMPD1-202ENST00000526280 KRTAP7-1Q8IUC3 87 aa8.09□□□□□ -1.11
SMPD1-202ENST00000526280 C7orf33Q8WU49 177 aa8.09□□□□□ -1.11
SMPD1-202ENST00000526280 PRO1854Q9UHT4 67 aa8.09□□□□□ -1.11
SMPD1-202ENST00000526280 SRRM2Q9UQ35 2752 aaKnown RBP8.09□□□□□ -1.11
SMPD1-202ENST00000526280 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
SMPD1-202ENST00000526280 A0A0B4J2C4 111 aa8.07□□□□□ -1.12
SMPD1-202ENST00000526280 RPL37AP61513 92 aaKnown RBP8.07□□□□□ -1.12
SMPD1-202ENST00000526280 FAM19A5Q7Z5A7 132 aaPredicted RBP8.07□□□□□ -1.12
SMPD1-202ENST00000526280 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
SMPD1-202ENST00000526280 IFITM1P13164 125 aa8.06□□□□□ -1.12
SMPD1-202ENST00000526280 LINC00158P58513 81 aa8.06□□□□□ -1.12
SMPD1-202ENST00000526280 SERTAD4-AS1Q5TG53 156 aa8.06□□□□□ -1.12
SMPD1-202ENST00000526280 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
SMPD1-202ENST00000526280 LYRM7Q5U5X0 104 aa8.05□□□□□ -1.12
SMPD1-202ENST00000526280 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
SMPD1-202ENST00000526280 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
SMPD1-202ENST00000526280 M0QXV9 152 aa8.04□□□□□ -1.12
SMPD1-202ENST00000526280 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
SMPD1-202ENST00000526280 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
SMPD1-202ENST00000526280 A0A0U1RRA0 63 aa8.03□□□□□ -1.12
SMPD1-202ENST00000526280 OCIAD2Q56VL3 154 aa8.03□□□□□ -1.12
SMPD1-202ENST00000526280 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
SMPD1-202ENST00000526280 C22orf24Q9Y442 160 aa8.03□□□□□ -1.12
SMPD1-202ENST00000526280 H3BMG7 143 aa8.03□□□□□ -1.12
SMPD1-202ENST00000526280 PSMB2P49721 201 aa8.03□□□□□ -1.12
SMPD1-202ENST00000526280 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
SMPD1-202ENST00000526280 F8W1H4 67 aa8.02□□□□□ -1.13
SMPD1-202ENST00000526280 INAFM2P0DMQ5 153 aa8.02□□□□□ -1.13
SMPD1-202ENST00000526280 NPC2P61916 151 aa8.02□□□□□ -1.13
SMPD1-202ENST00000526280 PRR3P79522 188 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms