RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 PTTG1IPP53801 180 aa10.97□□□□□ -0.65
CCS-204ENST00000526066 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
CCS-204ENST00000526066 LINC00474Q9P2X8 69 aa10.97□□□□□ -0.65
CCS-204ENST00000526066 LINC00158P58513 81 aa10.96□□□□□ -0.65
CCS-204ENST00000526066 CIRBPQ14011 172 aaKnown RBP10.96□□□□□ -0.65
CCS-204ENST00000526066 GAGE2BQ13066 116 aa10.95□□□□□ -0.66
CCS-204ENST00000526066 SCGB1D4Q6XE38 83 aa10.95□□□□□ -0.66
CCS-204ENST00000526066 CIRBP-AS1Q8TBR5 109 aa10.95□□□□□ -0.66
CCS-204ENST00000526066 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
CCS-204ENST00000526066 C14orf144Q96I85 54 aa10.94□□□□□ -0.66
CCS-204ENST00000526066 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
CCS-204ENST00000526066 IGKV2-24A0A0C4DH68 120 aa10.93□□□□□ -0.66
CCS-204ENST00000526066 RPL37AP61513 92 aaKnown RBP10.93□□□□□ -0.66
CCS-204ENST00000526066 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
CCS-204ENST00000526066 SPACA4Q8TDM5 124 aa10.93□□□□□ -0.66
CCS-204ENST00000526066 LITAFQ99732 161 aa10.93□□□□□ -0.66
CCS-204ENST00000526066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.93□□□□□ -0.66
CCS-204ENST00000526066 DNAH8Q96JB1 4490 aa10.93□□□□□ -0.66
CCS-204ENST00000526066 A0A0U1RRA0 63 aa10.92□□□□□ -0.66
CCS-204ENST00000526066 CHTF8P0CG12 524 aa10.92□□□□□ -0.66
CCS-204ENST00000526066 SLC25A34Q6PIV7 304 aa10.92□□□□□ -0.66
CCS-204ENST00000526066 SND1-IT1Q9HBX3 110 aa10.92□□□□□ -0.66
CCS-204ENST00000526066 HMCN2Q8NDA2 5059 aa10.92□□□□□ -0.66
CCS-204ENST00000526066 TMEM238C9JI98 176 aa10.91□□□□□ -0.66
CCS-204ENST00000526066 PANO1I0J062 215 aa10.91□□□□□ -0.66
CCS-204ENST00000526066 KRTAP10-4P60372 401 aaPredicted RBP10.91□□□□□ -0.66
CCS-204ENST00000526066 C9orf129Q5T035 196 aaKnown RBP10.91□□□□□ -0.66
CCS-204ENST00000526066 XAGE1AQ9HD64 81 aa10.91□□□□□ -0.66
CCS-204ENST00000526066 ADAMTSL4-AS1Q5T5F5 129 aa10.9□□□□□ -0.66
CCS-204ENST00000526066 C12orf57Q99622 126 aa10.89□□□□□ -0.67
CCS-204ENST00000526066 SPANXDQ9BXN6 97 aa10.89□□□□□ -0.67
CCS-204ENST00000526066 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
CCS-204ENST00000526066 LOC107984156A0A0G2JMH3 177 aa10.88□□□□□ -0.67
CCS-204ENST00000526066 Q6ZVH6 145 aa10.88□□□□□ -0.67
CCS-204ENST00000526066 ARL17AQ8IVW1 177 aa10.88□□□□□ -0.67
CCS-204ENST00000526066 DAND5Q8N907 189 aa10.88□□□□□ -0.67
CCS-204ENST00000526066 SPANXB1Q9NS25 103 aaPredicted RBP10.88□□□□□ -0.67
CCS-204ENST00000526066 TP73-AS1Q9UF72 201 aa10.88□□□□□ -0.67
CCS-204ENST00000526066 HIGD1BQ9P298 99 aa10.87□□□□□ -0.67
CCS-204ENST00000526066 A0A087WYN8 130 aa10.86□□□□□ -0.67
CCS-204ENST00000526066 LINC00518Q8N0U6 118 aa10.86□□□□□ -0.67
CCS-204ENST00000526066 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
CCS-204ENST00000526066 PPDPFQ9H3Y8 114 aa10.86□□□□□ -0.67
CCS-204ENST00000526066 PLAC8Q9NZF1 115 aa10.86□□□□□ -0.67
CCS-204ENST00000526066 UQCR10Q9UDW1 63 aa10.86□□□□□ -0.67
CCS-204ENST00000526066 MIEN1Q9BRT3 115 aa10.85□□□□□ -0.67
CCS-204ENST00000526066 LRP1Q07954 4544 aaKnown RBP10.84□□□□□ -0.67
CCS-204ENST00000526066 A0A1W2PNN7 141 aa10.84□□□□□ -0.67
CCS-204ENST00000526066 IFITM1P13164 125 aa10.84□□□□□ -0.67
CCS-204ENST00000526066 C2orf91Q6ZV80 131 aa10.84□□□□□ -0.67
CCS-204ENST00000526066 LINC00308Q8TCZ7 52 aa10.84□□□□□ -0.67
CCS-204ENST00000526066 COPS9Q8WXC6 57 aa10.84□□□□□ -0.67
CCS-204ENST00000526066 SOSTDC1Q6X4U4 206 aa10.83□□□□□ -0.68
CCS-204ENST00000526066 IGLV5-37A0A075B6J1 123 aa10.82□□□□□ -0.68
CCS-204ENST00000526066 FAM168BA1KXE4 195 aa10.82□□□□□ -0.68
CCS-204ENST00000526066 RPL24P83731 157 aaKnown RBP10.82□□□□□ -0.68
CCS-204ENST00000526066 SRSF9Q13242 221 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCS-204ENST00000526066 KRTAP7-1Q8IUC3 87 aa10.82□□□□□ -0.68
CCS-204ENST00000526066 EIF4EBP3O60516 100 aaPredicted RBP10.81□□□□□ -0.68
CCS-204ENST00000526066 VPREB1P12018 145 aa10.81□□□□□ -0.68
CCS-204ENST00000526066 NDUFC2O95298 119 aa10.8□□□□□ -0.68
CCS-204ENST00000526066 FAM19A5Q7Z5A7 132 aaPredicted RBP10.8□□□□□ -0.68
CCS-204ENST00000526066 PRO1933Q9H354 126 aa10.8□□□□□ -0.68
CCS-204ENST00000526066 NPC2P61916 151 aa10.79□□□□□ -0.68
CCS-204ENST00000526066 Q8NDZ9 215 aa10.79□□□□□ -0.68
CCS-204ENST00000526066 TSTD3H0UI37 97 aa10.78□□□□□ -0.68
CCS-204ENST00000526066 M0QXV9 152 aa10.78□□□□□ -0.68
CCS-204ENST00000526066 HNRNPA3P51991 378 aaKnown RBP10.78□□□□□ -0.68
CCS-204ENST00000526066 TAL2Q16559 108 aa10.78□□□□□ -0.68
CCS-204ENST00000526066 MUSTN1Q8IVN3 82 aa10.78□□□□□ -0.68
CCS-204ENST00000526066 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
CCS-204ENST00000526066 HIST1H4GQ99525 98 aa10.78□□□□□ -0.68
CCS-204ENST00000526066 C22orf24Q9Y442 160 aa10.78□□□□□ -0.68
CCS-204ENST00000526066 FAT3Q8TDW7 4589 aa10.77□□□□□ -0.69
CCS-204ENST00000526066 LBHQ53QV2 105 aaPredicted RBP10.76□□□□□ -0.69
CCS-204ENST00000526066 TRBV10-2A0A0K0K1G8 114 aa10.75□□□□□ -0.69
CCS-204ENST00000526066 MRPL55Q7Z7F7 128 aaKnown RBP10.75□□□□□ -0.69
CCS-204ENST00000526066 M0R378 163 aa10.74□□□□□ -0.69
CCS-204ENST00000526066 PHF5AQ7RTV0 110 aaKnown RBP10.74□□□□□ -0.69
CCS-204ENST00000526066 PRR3P79522 188 aaKnown RBP10.73□□□□□ -0.69
CCS-204ENST00000526066 HSD52Q0P140 79 aa10.73□□□□□ -0.69
CCS-204ENST00000526066 C7orf33Q8WU49 177 aa10.73□□□□□ -0.69
CCS-204ENST00000526066 LINC00167Q96N53 147 aa10.72□□□□□ -0.69
CCS-204ENST00000526066 NCR3O14931 201 aa10.71□□□□□ -0.69
CCS-204ENST00000526066 MT1HL1P0DM35 61 aa10.71□□□□□ -0.69
CCS-204ENST00000526066 CEND1Q8N111 149 aa10.71□□□□□ -0.69
CCS-204ENST00000526066 IGKV2-28A0A075B6P5 120 aa10.7□□□□□ -0.7
CCS-204ENST00000526066 A4D1N5 150 aa10.7□□□□□ -0.7
CCS-204ENST00000526066 IGKV2D-28P01615 120 aa10.7□□□□□ -0.7
CCS-204ENST00000526066 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
CCS-204ENST00000526066 GAGE10A6NGK3 116 aa10.68□□□□□ -0.7
CCS-204ENST00000526066 UBE2BP63146 152 aa10.68□□□□□ -0.7
CCS-204ENST00000526066 IGLV1-50A0A075B6I6 118 aa10.67□□□□□ -0.7
CCS-204ENST00000526066 TMEM238LA0A1B0GVL6 79 aa10.66□□□□□ -0.7
CCS-204ENST00000526066 A6NJY4 79 aa10.66□□□□□ -0.7
CCS-204ENST00000526066 IGLV6-57P01721 117 aa10.66□□□□□ -0.7
CCS-204ENST00000526066 LINC00337Q8N6G1 96 aa10.66□□□□□ -0.7
CCS-204ENST00000526066 TRBV10-3A0A0K0K1G6 114 aa10.65□□□□□ -0.7
CCS-204ENST00000526066 RPL37AP8A6NKH3 93 aa10.65□□□□□ -0.7
CCS-204ENST00000526066 DDTP30046 118 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 203.6 ms