RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 SRRM2Q9UQ35 2752 aaKnown RBP7.71□□□□□ -1.18
CCS-202ENST00000525435 SERTAD4-AS1Q5TG53 156 aa7.7□□□□□ -1.18
CCS-202ENST00000525435 PHF5AQ7RTV0 110 aaKnown RBP7.7□□□□□ -1.18
CCS-202ENST00000525435 ABCA13Q86UQ4 5058 aa7.7□□□□□ -1.18
CCS-202ENST00000525435 LOC107984156A0A0G2JMH3 177 aa7.69□□□□□ -1.18
CCS-202ENST00000525435 INAFM2P0DMQ5 153 aa7.69□□□□□ -1.18
CCS-202ENST00000525435 ARL17AQ8IVW1 177 aa7.69□□□□□ -1.18
CCS-202ENST00000525435 A0A0J9YXY3 114 aa7.68□□□□□ -1.18
CCS-202ENST00000525435 PRR3P79522 188 aaKnown RBP7.68□□□□□ -1.18
CCS-202ENST00000525435 MRPL55Q7Z7F7 128 aaKnown RBP7.68□□□□□ -1.18
CCS-202ENST00000525435 MIR7-3HGQ8N6C7 128 aa7.68□□□□□ -1.18
CCS-202ENST00000525435 IGKV2D-26A0A0A0MRZ7 120 aa7.67□□□□□ -1.18
CCS-202ENST00000525435 A0A0U1RRA0 63 aa7.67□□□□□ -1.18
CCS-202ENST00000525435 HSBP1L1C9JCN9 74 aa7.67□□□□□ -1.18
CCS-202ENST00000525435 TIMM17BO60830 172 aa7.67□□□□□ -1.18
CCS-202ENST00000525435 ATOH7Q8N100 152 aa7.67□□□□□ -1.18
CCS-202ENST00000525435 NKAPP1Q8N9T2 125 aa7.67□□□□□ -1.18
CCS-202ENST00000525435 ZNF815PA8K554 130 aa7.66□□□□□ -1.18
CCS-202ENST00000525435 SCGB1D1O95968 90 aa7.66□□□□□ -1.18
CCS-202ENST00000525435 VPREB1P12018 145 aa7.66□□□□□ -1.18
CCS-202ENST00000525435 UBE2BP63146 152 aa7.66□□□□□ -1.18
CCS-202ENST00000525435 ANKRD39Q53RE8 183 aa7.66□□□□□ -1.18
CCS-202ENST00000525435 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
CCS-202ENST00000525435 BOD1L2Q8IYS8 172 aa7.64□□□□□ -1.19
CCS-202ENST00000525435 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
CCS-202ENST00000525435 SRSF9Q13242 221 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCS-202ENST00000525435 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
CCS-202ENST00000525435 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
CCS-202ENST00000525435 MIEN1Q9BRT3 115 aa7.63□□□□□ -1.19
CCS-202ENST00000525435 M0R378 163 aa7.62□□□□□ -1.19
CCS-202ENST00000525435 NDUFC2O95298 119 aa7.62□□□□□ -1.19
CCS-202ENST00000525435 JOSD1Q15040 202 aaPredicted RBP7.62□□□□□ -1.19
CCS-202ENST00000525435 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
CCS-202ENST00000525435 KRTAP11-1Q8IUC1 163 aa7.62□□□□□ -1.19
CCS-202ENST00000525435 LITAFQ99732 161 aa7.62□□□□□ -1.19
CCS-202ENST00000525435 IGLV1-50A0A075B6I6 118 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 IGLV7-43P04211 117 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 SCGB1D4Q6XE38 83 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 Q6ZVH6 145 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 PCP2Q8IVA1 136 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 DAND5Q8N907 189 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 COPS9Q8WXC6 57 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 TTTY13Q9BZ97 58 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
CCS-202ENST00000525435 FLG2Q5D862 2391 aaPredicted RBP7.61□□□□□ -1.19
CCS-202ENST00000525435 RPL37AP8A6NKH3 93 aa7.6□□□□□ -1.19
CCS-202ENST00000525435 TMEM238C9JI98 176 aa7.6□□□□□ -1.19
CCS-202ENST00000525435 HNRNPA3P51991 378 aaKnown RBP7.6□□□□□ -1.19
CCS-202ENST00000525435 Q8NDZ9 215 aa7.6□□□□□ -1.19
CCS-202ENST00000525435 TMA7Q9Y2S6 64 aaKnown RBP7.6□□□□□ -1.19
CCS-202ENST00000525435 GAGE10A6NGK3 116 aa7.59□□□□□ -1.19
CCS-202ENST00000525435 BCE1O60756 84 aa7.59□□□□□ -1.19
CCS-202ENST00000525435 OXTP01178 125 aa7.58□□□□□ -1.2
CCS-202ENST00000525435 IFITM1P13164 125 aa7.58□□□□□ -1.2
CCS-202ENST00000525435 LINC00308Q8TCZ7 52 aa7.58□□□□□ -1.2
CCS-202ENST00000525435 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
CCS-202ENST00000525435 SPANXB1Q9NS25 103 aaPredicted RBP7.58□□□□□ -1.2
CCS-202ENST00000525435 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
CCS-202ENST00000525435 DLEU1O43261 78 aa7.57□□□□□ -1.2
CCS-202ENST00000525435 ZNF861PO60384 105 aa7.57□□□□□ -1.2
CCS-202ENST00000525435 SOSTDC1Q6X4U4 206 aa7.57□□□□□ -1.2
CCS-202ENST00000525435 DIRC1Q969H9 104 aa7.57□□□□□ -1.2
CCS-202ENST00000525435 IGKV2-28A0A075B6P5 120 aa7.56□□□□□ -1.2
CCS-202ENST00000525435 KRTAP29-1A8MX34 341 aaPredicted RBP7.56□□□□□ -1.2
CCS-202ENST00000525435 IGKV2D-28P01615 120 aa7.56□□□□□ -1.2
CCS-202ENST00000525435 COX8AP10176 69 aa7.56□□□□□ -1.2
CCS-202ENST00000525435 S100A12P80511 92 aa7.56□□□□□ -1.2
CCS-202ENST00000525435 LINC00518Q8N0U6 118 aa7.56□□□□□ -1.2
CCS-202ENST00000525435 KCNQ1DNQ9H478 68 aa7.56□□□□□ -1.2
CCS-202ENST00000525435 CBY1Q9Y3M2 126 aa7.56□□□□□ -1.2
CCS-202ENST00000525435 EIF4EBP3O60516 100 aaPredicted RBP7.55□□□□□ -1.2
CCS-202ENST00000525435 RPL28P46779 137 aaKnown RBP7.55□□□□□ -1.2
CCS-202ENST00000525435 REG3GQ6UW15 175 aa7.55□□□□□ -1.2
CCS-202ENST00000525435 VAMP8Q9BV40 100 aa7.55□□□□□ -1.2
CCS-202ENST00000525435 TMEM126AQ9H061 195 aa7.54□□□□□ -1.2
CCS-202ENST00000525435 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
CCS-202ENST00000525435 H0Y9J4 135 aa7.53□□□□□ -1.2
CCS-202ENST00000525435 PRYO14603 147 aa7.53□□□□□ -1.2
CCS-202ENST00000525435 NCR3O14931 201 aa7.53□□□□□ -1.2
CCS-202ENST00000525435 IGLV6-57P01721 117 aa7.53□□□□□ -1.2
CCS-202ENST00000525435 NPC2P61916 151 aa7.53□□□□□ -1.2
CCS-202ENST00000525435 PYY3Q5JQD4 70 aa7.53□□□□□ -1.2
CCS-202ENST00000525435 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
CCS-202ENST00000525435 DDTP30046 118 aa7.52□□□□□ -1.21
CCS-202ENST00000525435 SPRR1AP35321 89 aa7.52□□□□□ -1.21
CCS-202ENST00000525435 SPATA45Q537H7 98 aa7.52□□□□□ -1.21
CCS-202ENST00000525435 S100A7L2Q5SY68 101 aa7.52□□□□□ -1.21
CCS-202ENST00000525435 PAM16Q9Y3D7 125 aa7.52□□□□□ -1.21
CCS-202ENST00000525435 UBE2AP49459 152 aa7.51□□□□□ -1.21
CCS-202ENST00000525435 KRTAP13-1Q8IUC0 172 aa7.51□□□□□ -1.21
CCS-202ENST00000525435 MUSTN1Q8IVN3 82 aa7.51□□□□□ -1.21
CCS-202ENST00000525435 LINC00337Q8N6G1 96 aa7.51□□□□□ -1.21
CCS-202ENST00000525435 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
CCS-202ENST00000525435 LINC01600Q96MT4 127 aa7.5□□□□□ -1.21
CCS-202ENST00000525435 SLC25A34Q6PIV7 304 aa7.49□□□□□ -1.21
CCS-202ENST00000525435 FAM19A1Q7Z5A9 133 aa7.49□□□□□ -1.21
CCS-202ENST00000525435 C14orf144Q96I85 54 aa7.49□□□□□ -1.21
CCS-202ENST00000525435 HIGD1BQ9P298 99 aa7.49□□□□□ -1.21
CCS-202ENST00000525435 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms