RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 GAGE2DQ9UEU5 116 aa4.09□□□□□ -1.75
CD44-214ENST00000525211 NDUFA12Q9UI09 145 aa4.09□□□□□ -1.75
CD44-214ENST00000525211 ABCA13Q86UQ4 5058 aa4.09□□□□□ -1.76
CD44-214ENST00000525211 A0A087WYN8 130 aa4.08□□□□□ -1.76
CD44-214ENST00000525211 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.08□□□□□ -1.76
CD44-214ENST00000525211 SCGB1D1O95968 90 aa4.08□□□□□ -1.76
CD44-214ENST00000525211 TLX1NBP0CAT3 122 aa4.08□□□□□ -1.76
CD44-214ENST00000525211 SMIM13P0DJ93 91 aa4.08□□□□□ -1.76
CD44-214ENST00000525211 PFN2P35080 140 aa4.08□□□□□ -1.76
CD44-214ENST00000525211 RPL18AQ02543 176 aaKnown RBP4.08□□□□□ -1.76
CD44-214ENST00000525211 JOSD1Q15040 202 aaPredicted RBP4.08□□□□□ -1.76
CD44-214ENST00000525211 ADAMTSL4-AS1Q5T5F5 129 aa4.08□□□□□ -1.76
CD44-214ENST00000525211 SERTAD4-AS1Q5TG53 156 aa4.08□□□□□ -1.76
CD44-214ENST00000525211 DAND5Q8N907 189 aa4.08□□□□□ -1.76
CD44-214ENST00000525211 LITAFQ99732 161 aa4.08□□□□□ -1.76
CD44-214ENST00000525211 VPS13BQ7Z7G8 4022 aa4.07□□□□□ -1.76
CD44-214ENST00000525211 TRBV30A0A0K0K1B3 111 aa4.07□□□□□ -1.76
CD44-214ENST00000525211 LOC107984640A0A0U1RRK4 108 aa4.07□□□□□ -1.76
CD44-214ENST00000525211 SOSTDC1Q6X4U4 206 aa4.07□□□□□ -1.76
CD44-214ENST00000525211 ERG28Q9UKR5 140 aa4.07□□□□□ -1.76
CD44-214ENST00000525211 A0A0J9YXY3 114 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 C20orf202A1L168 122 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 EPM2AB3EWF7 344 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 NDUFC2-KCTD14E9PQ53 114 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 F8WDY8 70 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 LGALS3P17931 250 aaKnown RBP4.06□□□□□ -1.76
CD44-214ENST00000525211 CXCL5P42830 114 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 NMUP48645 174 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 AKR1D1P51857 326 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 PRR3P79522 188 aaKnown RBP4.06□□□□□ -1.76
CD44-214ENST00000525211 PHF5AQ7RTV0 110 aaKnown RBP4.06□□□□□ -1.76
CD44-214ENST00000525211 SND1-IT1Q9HBX3 110 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 PLAC8Q9NZF1 115 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 HERC1Q15751 4861 aa4.06□□□□□ -1.76
CD44-214ENST00000525211 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
CD44-214ENST00000525211 ZNF815PA8K554 130 aa4.05□□□□□ -1.76
CD44-214ENST00000525211 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
CD44-214ENST00000525211 KRTAP10-4P60372 401 aaPredicted RBP4.05□□□□□ -1.76
CD44-214ENST00000525211 HERVK_113P61574 105 aa4.05□□□□□ -1.76
CD44-214ENST00000525211 NPC2P61916 151 aa4.05□□□□□ -1.76
CD44-214ENST00000525211 FAM19A5Q7Z5A7 132 aaPredicted RBP4.05□□□□□ -1.76
CD44-214ENST00000525211 MIR7-3HGQ8N6C7 128 aa4.05□□□□□ -1.76
CD44-214ENST00000525211 PAM16Q9Y3D7 125 aa4.05□□□□□ -1.76
CD44-214ENST00000525211 MYMXA0A1B0GTQ4 84 aa4.04□□□□□ -1.76
CD44-214ENST00000525211 CDK2AP2O75956 126 aa4.04□□□□□ -1.76
CD44-214ENST00000525211 VPREB1P12018 145 aa4.04□□□□□ -1.76
CD44-214ENST00000525211 LINC00158P58513 81 aa4.04□□□□□ -1.76
CD44-214ENST00000525211 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
CD44-214ENST00000525211 C14orf144Q96I85 54 aa4.04□□□□□ -1.76
CD44-214ENST00000525211 HNRNPA3P51991 378 aaKnown RBP4.03□□□□□ -1.76
CD44-214ENST00000525211 HERV-K104P63124 156 aa4.03□□□□□ -1.76
CD44-214ENST00000525211 SPATA45Q537H7 98 aa4.03□□□□□ -1.76
CD44-214ENST00000525211 MEIG1Q5JSS6 88 aa4.03□□□□□ -1.76
CD44-214ENST00000525211 DPH3Q96FX2 82 aa4.03□□□□□ -1.76
CD44-214ENST00000525211 GAGE10A6NGK3 116 aa4.02□□□□□ -1.77
CD44-214ENST00000525211 COX8AP10176 69 aa4.02□□□□□ -1.77
CD44-214ENST00000525211 LCE3BQ5TA77 95 aa4.02□□□□□ -1.77
CD44-214ENST00000525211 C2orf91Q6ZV80 131 aa4.02□□□□□ -1.77
CD44-214ENST00000525211 C22orf24Q9Y442 160 aa4.02□□□□□ -1.77
CD44-214ENST00000525211 M0QXV9 152 aa4.01□□□□□ -1.77
CD44-214ENST00000525211 BOD1L2Q8IYS8 172 aa4.01□□□□□ -1.77
CD44-214ENST00000525211 C7orf33Q8WU49 177 aa4.01□□□□□ -1.77
CD44-214ENST00000525211 VAMP8Q9BV40 100 aa4.01□□□□□ -1.77
CD44-214ENST00000525211 IGLV5-37A0A075B6J1 123 aa4□□□□□ -1.77
CD44-214ENST00000525211 LOC107984156A0A0G2JMH3 177 aa4□□□□□ -1.77
CD44-214ENST00000525211 RPL37AP8A6NKH3 93 aa4□□□□□ -1.77
CD44-214ENST00000525211 NCR3O14931 201 aa4□□□□□ -1.77
CD44-214ENST00000525211 COX17Q14061 63 aa4□□□□□ -1.77
CD44-214ENST00000525211 ARL17AQ8IVW1 177 aa4□□□□□ -1.77
CD44-214ENST00000525211 Q8N1X5 172 aa4□□□□□ -1.77
CD44-214ENST00000525211 LINC00308Q8TCZ7 52 aa4□□□□□ -1.77
CD44-214ENST00000525211 LINC00167Q96N53 147 aa4□□□□□ -1.77
CD44-214ENST00000525211 PRO1933Q9H354 126 aa4□□□□□ -1.77
CD44-214ENST00000525211 IGKV2-28A0A075B6P5 120 aa3.99□□□□□ -1.77
CD44-214ENST00000525211 HSBP1L1C9JCN9 74 aa3.99□□□□□ -1.77
CD44-214ENST00000525211 TIMM17BO60830 172 aa3.99□□□□□ -1.77
CD44-214ENST00000525211 IGKV2D-28P01615 120 aa3.99□□□□□ -1.77
CD44-214ENST00000525211 Q5VSD8 79 aa3.99□□□□□ -1.77
CD44-214ENST00000525211 MUSTN1Q8IVN3 82 aa3.99□□□□□ -1.77
CD44-214ENST00000525211 SPANXDQ9BXN6 97 aa3.99□□□□□ -1.77
CD44-214ENST00000525211 SPANXCQ9NY87 97 aa3.99□□□□□ -1.77
CD44-214ENST00000525211 LINC00474Q9P2X8 69 aa3.99□□□□□ -1.77
CD44-214ENST00000525211 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
CD44-214ENST00000525211 TMEM238C9JI98 176 aa3.98□□□□□ -1.77
CD44-214ENST00000525211 SFTA2Q6UW10 78 aa3.98□□□□□ -1.77
CD44-214ENST00000525211 SCGB1D4Q6XE38 83 aa3.98□□□□□ -1.77
CD44-214ENST00000525211 PSORS1C2Q9UIG4 136 aa3.98□□□□□ -1.77
CD44-214ENST00000525211 FAT3Q8TDW7 4589 aa3.97□□□□□ -1.77
CD44-214ENST00000525211 PRYO14603 147 aa3.97□□□□□ -1.77
CD44-214ENST00000525211 DLEU1O43261 78 aa3.97□□□□□ -1.77
CD44-214ENST00000525211 PCP4P48539 62 aa3.97□□□□□ -1.77
CD44-214ENST00000525211 RPL37AP61513 92 aaKnown RBP3.97□□□□□ -1.77
CD44-214ENST00000525211 SLC25A34Q6PIV7 304 aa3.97□□□□□ -1.77
CD44-214ENST00000525211 MRPL55Q7Z7F7 128 aaKnown RBP3.97□□□□□ -1.77
CD44-214ENST00000525211 LINC00337Q8N6G1 96 aa3.97□□□□□ -1.77
CD44-214ENST00000525211 FLG2Q5D862 2391 aaPredicted RBP3.97□□□□□ -1.77
CD44-214ENST00000525211 IGLV1-50A0A075B6I6 118 aa3.96□□□□□ -1.78
CD44-214ENST00000525211 TRBV10-3A0A0K0K1G6 114 aa3.96□□□□□ -1.78
CD44-214ENST00000525211 M0R378 163 aa3.96□□□□□ -1.78
CD44-214ENST00000525211 C12orf57Q99622 126 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms