RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 NDUFA6P56556 154 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 PKIAP61925 76 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 LINC01620Q4KN68 170 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 TEX43Q6ZNM6 134 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 C5orf38Q86SI9 138 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 BAGE3Q86Y29 109 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 HIST3H2BBQ8N257 126 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 Q8N814 137 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 LINC00526Q96FQ7 95 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 TMEM141Q96I45 108 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 TMEM101Q96IK0 257 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 SCGB3A1Q96QR1 104 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 CST9LQ9H4G1 147 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 DHRS4-AS1Q9P1J3 65 aa1.85□□□□□ -2.11
CSDE1-208ENST00000524652 C5orf52A6NGY3 159 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 C11orf86A6NJI1 115 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.84□□□□□ -2.11
CSDE1-208ENST00000524652 PANO1I0J062 215 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 PSCAO43653 123 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 LEPROTL1O95214 131 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 IGLC3P0DOY3 106 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 ZNF22P17026 224 aaPredicted RBP1.84□□□□□ -2.11
CSDE1-208ENST00000524652 KIAA0087Q14695 138 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 PMVKQ15126 192 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 CD164L2Q6UWJ8 174 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 LINC00336Q6ZUF6 198 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 IFI27L1Q96BM0 104 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 CDKN2A-AS1Q9UH64 79 aa1.84□□□□□ -2.11
CSDE1-208ENST00000524652 IGHV3-64A0A075B6Q5 118 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 GVQW2A0A096LPI5 108 aaPredicted RBP1.83□□□□□ -2.12
CSDE1-208ENST00000524652 TRAV12-1A0A0B4J245 112 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 TINCRA0A1B0GVN0 87 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 F8VRH5 84 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 H0Y8G0 127 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 COX7A2LO14548 114 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 SPINK8P0C7L1 97 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 C3orf79P0CE67 100 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 HNRNPA3P51991 378 aaKnown RBP1.83□□□□□ -2.12
CSDE1-208ENST00000524652 TSPEAR-AS2P59090 65 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 HAMPP81172 84 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 SS18Q15532 418 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 C2orf82Q6UX34 121 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 Q6ZN92 141 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 Q6ZRU5 148 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 RMI2Q96E14 147 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 HIST1H2BLQ99880 126 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 PMCHL2Q9BQD1 86 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 C2orf88Q9BSF0 95 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 CHAC1Q9BUX1 264 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 VCX2Q9H322 139 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 MRPL35Q9NZE8 188 aaKnown RBP1.83□□□□□ -2.12
CSDE1-208ENST00000524652 CHTOPQ9Y3Y2 248 aaKnown RBP1.83□□□□□ -2.12
CSDE1-208ENST00000524652 SSPOA2VEC9 5147 aa1.83□□□□□ -2.12
CSDE1-208ENST00000524652 IGHV1-58A0A0C4DH39 117 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 TMEM223A0PJW6 202 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 LINC01549A6NIU2 74 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 SYS1-DBNDD2H3BUS1 97 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 ATP5LO75964 103 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 CHTF8P0CG12 524 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 G0S2P27469 103 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 CNBPP62633 177 aaKnown RBP1.82□□□□□ -2.12
CSDE1-208ENST00000524652 HERVK_113P63121 156 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 SPAG11BQ08648 103 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 SMAGPQ0VAQ4 97 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 MAJINQ3KP22 176 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 C9orf116Q5BN46 136 aaPredicted RBP1.82□□□□□ -2.12
CSDE1-208ENST00000524652 LINC01545Q5VT33 79 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 UNQ6190/PRO20217Q6UXQ8 127 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 LINC00469Q8N7U9 141 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 C9orf163Q8N9P6 203 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 ORAOV1Q8WV07 137 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 C6orf48Q9UBA6 75 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 TP73-AS1Q9UF72 201 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 LRP2P98164 4655 aa1.82□□□□□ -2.12
CSDE1-208ENST00000524652 A0A096LNI7 61 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 IGKV2D-26A0A0A0MRZ7 120 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 C16orf90A8MZG2 172 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 IGKCP01834 107 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 KRTDAPP60985 99 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 TMEM170BQ5T4T1 132 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 PET117Q6UWS5 81 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 SDIM1Q6ZPB5 146 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 Q6ZSA8 131 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 Q8IZM0 81 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 ATOH7Q8N100 152 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 LINC01561Q8N1V8 128 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 Q8NDZ9 215 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 OR10D4PQ8NGN7 298 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 COX7B2Q8TF08 81 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 CARD19Q96LW7 228 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 PACRGQ96M98 296 aaPredicted RBP1.81□□□□□ -2.12
CSDE1-208ENST00000524652 MAP1LC3CQ9BXW4 147 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 TTTY13Q9BZ97 58 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 GEMIN7Q9H840 131 aaKnown RBP1.81□□□□□ -2.12
CSDE1-208ENST00000524652 TOMM7Q9P0U1 55 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 HSPB8Q9UJY1 196 aa1.81□□□□□ -2.12
CSDE1-208ENST00000524652 DPM2O94777 84 aa1.8□□□□□ -2.12
CSDE1-208ENST00000524652 APOMO95445 188 aa1.8□□□□□ -2.12
CSDE1-208ENST00000524652 S100A6P06703 90 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms