RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PAPPA-AS1Q5QFB9 102 aa6.41□□□□□ -1.38
SDCBP-211ENST00000523441 AKAP14Q86UN6 197 aa6.41□□□□□ -1.38
SDCBP-211ENST00000523441 C9JQL5 133 aa6.4□□□□□ -1.38
SDCBP-211ENST00000523441 GAGE2AQ6NT46 116 aa6.4□□□□□ -1.38
SDCBP-211ENST00000523441 Q8N377 158 aa6.4□□□□□ -1.38
SDCBP-211ENST00000523441 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.38
SDCBP-211ENST00000523441 SCGB3A1Q96QR1 104 aa6.4□□□□□ -1.38
SDCBP-211ENST00000523441 TINCRA0A1B0GVN0 87 aa6.39□□□□□ -1.39
SDCBP-211ENST00000523441 C9orf92A6NGG3 77 aa6.39□□□□□ -1.39
SDCBP-211ENST00000523441 ADCYAP1P18509 176 aa6.39□□□□□ -1.39
SDCBP-211ENST00000523441 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
SDCBP-211ENST00000523441 TIMM17AQ99595 171 aa6.39□□□□□ -1.39
SDCBP-211ENST00000523441 PRSS47A8MTI9 375 aa6.38□□□□□ -1.39
SDCBP-211ENST00000523441 TCTE3Q8IZS6 198 aa6.38□□□□□ -1.39
SDCBP-211ENST00000523441 ERG28Q9UKR5 140 aa6.38□□□□□ -1.39
SDCBP-211ENST00000523441 A0A0U1RRA0 63 aa6.37□□□□□ -1.39
SDCBP-211ENST00000523441 SLC25A20O43772 301 aa6.37□□□□□ -1.39
SDCBP-211ENST00000523441 NPSP0C0P6 89 aa6.37□□□□□ -1.39
SDCBP-211ENST00000523441 TOMM6Q96B49 74 aa6.37□□□□□ -1.39
SDCBP-211ENST00000523441 LAMTOR2Q9Y2Q5 125 aa6.37□□□□□ -1.39
SDCBP-211ENST00000523441 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
SDCBP-211ENST00000523441 ATP5L2Q7Z4Y8 100 aa6.36□□□□□ -1.39
SDCBP-211ENST00000523441 H3BRM9 83 aa6.35□□□□□ -1.39
SDCBP-211ENST00000523441 ERASQ7Z444 233 aa6.35□□□□□ -1.39
SDCBP-211ENST00000523441 NXT2Q9NPJ8 142 aaKnown RBP6.35□□□□□ -1.39
SDCBP-211ENST00000523441 IGLV5-45A0A087WSX0 123 aa6.34□□□□□ -1.39
SDCBP-211ENST00000523441 ETDCA0A1B0GVM5 59 aa6.34□□□□□ -1.39
SDCBP-211ENST00000523441 NCR3O14931 201 aa6.34□□□□□ -1.39
SDCBP-211ENST00000523441 NDUFA6P56556 154 aa6.34□□□□□ -1.39
SDCBP-211ENST00000523441 ANKRD39Q53RE8 183 aa6.34□□□□□ -1.39
SDCBP-211ENST00000523441 CST9LQ9H4G1 147 aa6.34□□□□□ -1.39
SDCBP-211ENST00000523441 LINC00158P58513 81 aa6.33□□□□□ -1.4
SDCBP-211ENST00000523441 KIAA1644Q3SXP7 199 aa6.33□□□□□ -1.4
SDCBP-211ENST00000523441 C9orf153Q5TBE3 101 aa6.33□□□□□ -1.4
SDCBP-211ENST00000523441 K7EMI3 77 aa6.32□□□□□ -1.4
SDCBP-211ENST00000523441 G0S2P27469 103 aa6.32□□□□□ -1.4
SDCBP-211ENST00000523441 PEA15Q15121 130 aa6.31□□□□□ -1.4
SDCBP-211ENST00000523441 ANAPC16Q96DE5 110 aa6.31□□□□□ -1.4
SDCBP-211ENST00000523441 PRYO14603 147 aa6.3□□□□□ -1.4
SDCBP-211ENST00000523441 ERC2-IT1O76042 136 aa6.3□□□□□ -1.4
SDCBP-211ENST00000523441 PMVKQ15126 192 aa6.3□□□□□ -1.4
SDCBP-211ENST00000523441 HRCT1Q6UXD1 115 aa6.3□□□□□ -1.4
SDCBP-211ENST00000523441 hCG_2014768A0A024R1R8 64 aa6.29□□□□□ -1.4
SDCBP-211ENST00000523441 COX17Q14061 63 aa6.29□□□□□ -1.4
SDCBP-211ENST00000523441 LINC00483Q53H64 154 aa6.29□□□□□ -1.4
SDCBP-211ENST00000523441 SSBP3-AS1Q7Z2R9 100 aa6.29□□□□□ -1.4
SDCBP-211ENST00000523441 IGLV5-39A0A0G2JS06 123 aa6.28□□□□□ -1.4
SDCBP-211ENST00000523441 H3BS24 57 aa6.28□□□□□ -1.4
SDCBP-211ENST00000523441 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
SDCBP-211ENST00000523441 BOD1L2Q8IYS8 172 aa6.28□□□□□ -1.4
SDCBP-211ENST00000523441 ZNF22P17026 224 aaPredicted RBP6.27□□□□□ -1.41
SDCBP-211ENST00000523441 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
SDCBP-211ENST00000523441 TRBV10-3A0A0K0K1G6 114 aa6.26□□□□□ -1.41
SDCBP-211ENST00000523441 IGLC3P0DOY3 106 aa6.25□□□□□ -1.41
SDCBP-211ENST00000523441 TMEM170BQ5T4T1 132 aa6.25□□□□□ -1.41
SDCBP-211ENST00000523441 Q6Q795 121 aa6.25□□□□□ -1.41
SDCBP-211ENST00000523441 B5MCH6 92 aa6.24□□□□□ -1.41
SDCBP-211ENST00000523441 IGLV6-57P01721 117 aa6.24□□□□□ -1.41
SDCBP-211ENST00000523441 SMIM13P0DJ93 91 aa6.24□□□□□ -1.41
SDCBP-211ENST00000523441 SPRR1AP35321 89 aa6.24□□□□□ -1.41
SDCBP-211ENST00000523441 USH2AO75445 5202 aa6.23□□□□□ -1.41
SDCBP-211ENST00000523441 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
SDCBP-211ENST00000523441 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
SDCBP-211ENST00000523441 KRTAP4-16G5E9R7 235 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-211ENST00000523441 MT-ND4LP03901 98 aa6.23□□□□□ -1.41
SDCBP-211ENST00000523441 MEIG1Q5JSS6 88 aa6.23□□□□□ -1.41
SDCBP-211ENST00000523441 FA2HQ7L5A8 372 aa6.23□□□□□ -1.41
SDCBP-211ENST00000523441 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
SDCBP-211ENST00000523441 KCNQ1DNQ9H478 68 aa6.23□□□□□ -1.41
SDCBP-211ENST00000523441 SMCO4Q9NRQ5 59 aa6.23□□□□□ -1.41
SDCBP-211ENST00000523441 S100A12P80511 92 aa6.22□□□□□ -1.41
SDCBP-211ENST00000523441 Q9BRP9 147 aa6.22□□□□□ -1.41
SDCBP-211ENST00000523441 C11orf86A6NJI1 115 aa6.21□□□□□ -1.42
SDCBP-211ENST00000523441 MIR7-3HGQ8N6C7 128 aa6.21□□□□□ -1.42
SDCBP-211ENST00000523441 ST20-AS1Q8NBB2 130 aa6.21□□□□□ -1.42
SDCBP-211ENST00000523441 TRAV9-1A0A075B6T8 112 aa6.2□□□□□ -1.42
SDCBP-211ENST00000523441 H7C2G1 150 aa6.19□□□□□ -1.42
SDCBP-211ENST00000523441 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
SDCBP-211ENST00000523441 LINC01549A6NIU2 74 aa6.18□□□□□ -1.42
SDCBP-211ENST00000523441 DDTP30046 118 aa6.18□□□□□ -1.42
SDCBP-211ENST00000523441 PMCHL1Q16048 86 aa6.18□□□□□ -1.42
SDCBP-211ENST00000523441 BAGE3Q86Y29 109 aa6.18□□□□□ -1.42
SDCBP-211ENST00000523441 SFTA2Q6UW10 78 aa6.17□□□□□ -1.42
SDCBP-211ENST00000523441 Q6ZRX8 168 aa6.17□□□□□ -1.42
SDCBP-211ENST00000523441 SLC7A5P1Q8MH63 180 aa6.17□□□□□ -1.42
SDCBP-211ENST00000523441 LOC105371267A0A1B0GV96 52 aa6.16□□□□□ -1.42
SDCBP-211ENST00000523441 LINC01546A6NGU7 62 aa6.15□□□□□ -1.42
SDCBP-211ENST00000523441 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
SDCBP-211ENST00000523441 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-211ENST00000523441 A0A096LNJ9 63 aa6.13□□□□□ -1.43
SDCBP-211ENST00000523441 FABP9Q0Z7S8 132 aa6.13□□□□□ -1.43
SDCBP-211ENST00000523441 S100A7L2Q5SY68 101 aa6.13□□□□□ -1.43
SDCBP-211ENST00000523441 CHTOPQ9Y3Y2 248 aaKnown RBP6.13□□□□□ -1.43
SDCBP-211ENST00000523441 TMEM223A0PJW6 202 aa6.12□□□□□ -1.43
SDCBP-211ENST00000523441 S100A6P06703 90 aa6.12□□□□□ -1.43
SDCBP-211ENST00000523441 HBDP02042 147 aa6.11□□□□□ -1.43
SDCBP-211ENST00000523441 IFITM2Q01629 132 aa6.11□□□□□ -1.43
SDCBP-211ENST00000523441 JOSD1Q15040 202 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-211ENST00000523441 TRAV23DV6A0A075B6W5 121 aa6.1□□□□□ -1.43
SDCBP-211ENST00000523441 NPC2P61916 151 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms