RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 MT1HL1P0DM35 61 aa10.07□□□□□ -0.8
PABPC1-221ENST00000522720 C1orf137Q5JT78 98 aa10.07□□□□□ -0.8
PABPC1-221ENST00000522720 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
PABPC1-221ENST00000522720 SMIM6P0DI80 62 aa10.06□□□□□ -0.8
PABPC1-221ENST00000522720 SERTAD4-AS1Q5TG53 156 aa10.06□□□□□ -0.8
PABPC1-221ENST00000522720 ATOH7Q8N100 152 aa10.05□□□□□ -0.8
PABPC1-221ENST00000522720 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
PABPC1-221ENST00000522720 VAMP8Q9BV40 100 aa10.05□□□□□ -0.8
PABPC1-221ENST00000522720 UBE2BP63146 152 aa10.04□□□□□ -0.8
PABPC1-221ENST00000522720 REG3GQ6UW15 175 aa10.04□□□□□ -0.8
PABPC1-221ENST00000522720 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
PABPC1-221ENST00000522720 C22orf24Q9Y442 160 aa10.04□□□□□ -0.8
PABPC1-221ENST00000522720 E9PLD3 99 aa10.03□□□□□ -0.8
PABPC1-221ENST00000522720 LEPROTO15243 131 aa10.03□□□□□ -0.8
PABPC1-221ENST00000522720 IGLV7-43P04211 117 aa10.03□□□□□ -0.8
PABPC1-221ENST00000522720 LBHQ53QV2 105 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-221ENST00000522720 SFTA2Q6UW10 78 aa10.02□□□□□ -0.81
PABPC1-221ENST00000522720 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.81
PABPC1-221ENST00000522720 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
PABPC1-221ENST00000522720 LGALS3P17931 250 aaKnown RBP10□□□□□ -0.81
PABPC1-221ENST00000522720 PFN2P35080 140 aa10□□□□□ -0.81
PABPC1-221ENST00000522720 COX17Q14061 63 aa10□□□□□ -0.81
PABPC1-221ENST00000522720 ZNF625Q96I27 306 aaPredicted RBP10□□□□□ -0.81
PABPC1-221ENST00000522720 ERG28Q9UKR5 140 aa10□□□□□ -0.81
PABPC1-221ENST00000522720 J3QQQ9 107 aa9.99□□□□□ -0.81
PABPC1-221ENST00000522720 NMUP48645 174 aa9.99□□□□□ -0.81
PABPC1-221ENST00000522720 MRPL55Q7Z7F7 128 aaKnown RBP9.99□□□□□ -0.81
PABPC1-221ENST00000522720 TNXBP22105 4242 aa9.98□□□□□ -0.81
PABPC1-221ENST00000522720 SPATA45Q537H7 98 aa9.98□□□□□ -0.81
PABPC1-221ENST00000522720 DIRC1Q969H9 104 aa9.98□□□□□ -0.81
PABPC1-221ENST00000522720 PAM16Q9Y3D7 125 aa9.98□□□□□ -0.81
PABPC1-221ENST00000522720 IGLV5-37A0A075B6J1 123 aa9.97□□□□□ -0.81
PABPC1-221ENST00000522720 MYMXA0A1B0GTQ4 84 aa9.97□□□□□ -0.81
PABPC1-221ENST00000522720 LINC00587B1AMM8 73 aa9.97□□□□□ -0.81
PABPC1-221ENST00000522720 SND1-IT1Q9HBX3 110 aa9.97□□□□□ -0.81
PABPC1-221ENST00000522720 KRTAP10-8P60410 259 aa9.96□□□□□ -0.82
PABPC1-221ENST00000522720 ANKRD39Q53RE8 183 aa9.96□□□□□ -0.82
PABPC1-221ENST00000522720 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
PABPC1-221ENST00000522720 C12orf57Q99622 126 aa9.96□□□□□ -0.82
PABPC1-221ENST00000522720 HERV-K104P63124 156 aa9.95□□□□□ -0.82
PABPC1-221ENST00000522720 LINC00518Q8N0U6 118 aa9.95□□□□□ -0.82
PABPC1-221ENST00000522720 H0Y9J4 135 aa9.94□□□□□ -0.82
PABPC1-221ENST00000522720 NDUFA12Q9UI09 145 aa9.94□□□□□ -0.82
PABPC1-221ENST00000522720 DLEU1O43261 78 aa9.93□□□□□ -0.82
PABPC1-221ENST00000522720 NKAPP1Q8N9T2 125 aa9.93□□□□□ -0.82
PABPC1-221ENST00000522720 IGKV2D-26A0A0A0MRZ7 120 aa9.92□□□□□ -0.82
PABPC1-221ENST00000522720 GAGE10A6NGK3 116 aa9.92□□□□□ -0.82
PABPC1-221ENST00000522720 RPL37AP8A6NKH3 93 aa9.92□□□□□ -0.82
PABPC1-221ENST00000522720 COX8AP10176 69 aa9.92□□□□□ -0.82
PABPC1-221ENST00000522720 LINC00158P58513 81 aa9.92□□□□□ -0.82
PABPC1-221ENST00000522720 ZNF815PA8K554 130 aa9.91□□□□□ -0.82
PABPC1-221ENST00000522720 ZNF861PO60384 105 aa9.91□□□□□ -0.82
PABPC1-221ENST00000522720 VPREB1P12018 145 aa9.91□□□□□ -0.82
PABPC1-221ENST00000522720 RPL24P83731 157 aaKnown RBP9.91□□□□□ -0.82
PABPC1-221ENST00000522720 SLC25A34Q6PIV7 304 aa9.91□□□□□ -0.82
PABPC1-221ENST00000522720 BCE1O60756 84 aa9.9□□□□□ -0.82
PABPC1-221ENST00000522720 BOD1L2Q8IYS8 172 aa9.9□□□□□ -0.82
PABPC1-221ENST00000522720 SCGB1D4Q6XE38 83 aa9.89□□□□□ -0.83
PABPC1-221ENST00000522720 PCP2Q8IVA1 136 aa9.89□□□□□ -0.83
PABPC1-221ENST00000522720 C14orf144Q96I85 54 aa9.89□□□□□ -0.83
PABPC1-221ENST00000522720 HMCN2Q8NDA2 5059 aa9.89□□□□□ -0.83
PABPC1-221ENST00000522720 A0A0U1RRA0 63 aa9.88□□□□□ -0.83
PABPC1-221ENST00000522720 TSTD3H0UI37 97 aa9.88□□□□□ -0.83
PABPC1-221ENST00000522720 SMIM13P0DJ93 91 aa9.88□□□□□ -0.83
PABPC1-221ENST00000522720 Q8NDZ9 215 aa9.88□□□□□ -0.83
PABPC1-221ENST00000522720 UQCR10Q9UDW1 63 aa9.88□□□□□ -0.83
PABPC1-221ENST00000522720 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
PABPC1-221ENST00000522720 TSPEAR-AS2P59090 65 aa9.87□□□□□ -0.83
PABPC1-221ENST00000522720 MEIG1Q5JSS6 88 aa9.87□□□□□ -0.83
PABPC1-221ENST00000522720 IGLV1-50A0A075B6I6 118 aa9.86□□□□□ -0.83
PABPC1-221ENST00000522720 RPL28P46779 137 aaKnown RBP9.86□□□□□ -0.83
PABPC1-221ENST00000522720 IGKV2-28A0A075B6P5 120 aa9.85□□□□□ -0.83
PABPC1-221ENST00000522720 A0A0J9YXY3 114 aa9.85□□□□□ -0.83
PABPC1-221ENST00000522720 TIMM17BO60830 172 aa9.85□□□□□ -0.83
PABPC1-221ENST00000522720 IGKV2D-28P01615 120 aa9.85□□□□□ -0.83
PABPC1-221ENST00000522720 MIEN1Q9BRT3 115 aa9.85□□□□□ -0.83
PABPC1-221ENST00000522720 Q6ZVH6 145 aa9.84□□□□□ -0.83
PABPC1-221ENST00000522720 MIR7-3HGQ8N6C7 128 aa9.84□□□□□ -0.83
PABPC1-221ENST00000522720 PRR26Q8N8Z3 221 aa9.84□□□□□ -0.83
PABPC1-221ENST00000522720 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
PABPC1-221ENST00000522720 TMEM238C9JI98 176 aa9.83□□□□□ -0.84
PABPC1-221ENST00000522720 TTTY13Q9BZ97 58 aa9.83□□□□□ -0.84
PABPC1-221ENST00000522720 HIGD1BQ9P298 99 aa9.83□□□□□ -0.84
PABPC1-221ENST00000522720 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
PABPC1-221ENST00000522720 PRO1933Q9H354 126 aa9.82□□□□□ -0.84
PABPC1-221ENST00000522720 M0R378 163 aa9.81□□□□□ -0.84
PABPC1-221ENST00000522720 UBE2AP49459 152 aa9.8□□□□□ -0.84
PABPC1-221ENST00000522720 TMEM126AQ9H061 195 aa9.8□□□□□ -0.84
PABPC1-221ENST00000522720 LOC107984156A0A0G2JMH3 177 aa9.79□□□□□ -0.84
PABPC1-221ENST00000522720 ARL17AQ8IVW1 177 aa9.79□□□□□ -0.84
PABPC1-221ENST00000522720 SPANXB1Q9NS25 103 aaPredicted RBP9.79□□□□□ -0.84
PABPC1-221ENST00000522720 IFITM1P13164 125 aa9.78□□□□□ -0.84
PABPC1-221ENST00000522720 TAL2Q16559 108 aa9.78□□□□□ -0.84
PABPC1-221ENST00000522720 RPL13AP40429 203 aaKnown RBP9.77□□□□□ -0.85
PABPC1-221ENST00000522720 DAND5Q8N907 189 aa9.77□□□□□ -0.85
PABPC1-221ENST00000522720 SPANXDQ9BXN6 97 aa9.77□□□□□ -0.85
PABPC1-221ENST00000522720 SPANXCQ9NY87 97 aa9.77□□□□□ -0.85
PABPC1-221ENST00000522720 FAM19A1Q7Z5A9 133 aa9.76□□□□□ -0.85
PABPC1-221ENST00000522720 HIST1H4GQ99525 98 aa9.76□□□□□ -0.85
PABPC1-221ENST00000522720 PRLHP81277 87 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms