RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
VEGFA-222ENST00000520948 NMUP48645 174 aa11.32□□□□□ -0.6
VEGFA-222ENST00000520948 IGKV2D-26A0A0A0MRZ7 120 aa11.3□□□□□ -0.6
VEGFA-222ENST00000520948 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
VEGFA-222ENST00000520948 ATOH7Q8N100 152 aa11.3□□□□□ -0.6
VEGFA-222ENST00000520948 SND1-IT1Q9HBX3 110 aa11.29□□□□□ -0.6
VEGFA-222ENST00000520948 LINC00587B1AMM8 73 aa11.28□□□□□ -0.6
VEGFA-222ENST00000520948 SMIM13P0DJ93 91 aa11.28□□□□□ -0.6
VEGFA-222ENST00000520948 LINC00158P58513 81 aa11.28□□□□□ -0.6
VEGFA-222ENST00000520948 PHF5AQ7RTV0 110 aaKnown RBP11.28□□□□□ -0.6
VEGFA-222ENST00000520948 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-222ENST00000520948 ANKRD39Q53RE8 183 aa11.27□□□□□ -0.61
VEGFA-222ENST00000520948 MEIG1Q5JSS6 88 aa11.26□□□□□ -0.61
VEGFA-222ENST00000520948 C7orf33Q8WU49 177 aa11.26□□□□□ -0.61
VEGFA-222ENST00000520948 IGLV5-37A0A075B6J1 123 aa11.25□□□□□ -0.61
VEGFA-222ENST00000520948 A0A0U1RRA0 63 aa11.25□□□□□ -0.61
VEGFA-222ENST00000520948 C22orf24Q9Y442 160 aa11.25□□□□□ -0.61
VEGFA-222ENST00000520948 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
VEGFA-222ENST00000520948 TTTY13Q9BZ97 58 aa11.24□□□□□ -0.61
VEGFA-222ENST00000520948 TP73-AS1Q9UF72 201 aa11.24□□□□□ -0.61
VEGFA-222ENST00000520948 M0QXV9 152 aa11.23□□□□□ -0.61
VEGFA-222ENST00000520948 KRTAP11-1Q8IUC1 163 aa11.23□□□□□ -0.61
VEGFA-222ENST00000520948 MIR7-3HGQ8N6C7 128 aa11.23□□□□□ -0.61
VEGFA-222ENST00000520948 TMA7Q9Y2S6 64 aaKnown RBP11.23□□□□□ -0.61
VEGFA-222ENST00000520948 LOC107984156A0A0G2JMH3 177 aa11.22□□□□□ -0.61
VEGFA-222ENST00000520948 SCGB1D1O95968 90 aa11.22□□□□□ -0.61
VEGFA-222ENST00000520948 MT1HL1P0DM35 61 aa11.22□□□□□ -0.61
VEGFA-222ENST00000520948 ARL17AQ8IVW1 177 aa11.22□□□□□ -0.61
VEGFA-222ENST00000520948 Q8NDZ9 215 aa11.22□□□□□ -0.61
VEGFA-222ENST00000520948 VPREB1P12018 145 aa11.21□□□□□ -0.61
VEGFA-222ENST00000520948 ZNF815PA8K554 130 aa11.2□□□□□ -0.62
VEGFA-222ENST00000520948 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
VEGFA-222ENST00000520948 LITAFQ99732 161 aa11.2□□□□□ -0.62
VEGFA-222ENST00000520948 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
VEGFA-222ENST00000520948 TIMM17BO60830 172 aa11.18□□□□□ -0.62
VEGFA-222ENST00000520948 JOSD1Q15040 202 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-222ENST00000520948 LBHQ53QV2 105 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-222ENST00000520948 MRPL55Q7Z7F7 128 aaKnown RBP11.18□□□□□ -0.62
VEGFA-222ENST00000520948 PCP2Q8IVA1 136 aa11.18□□□□□ -0.62
VEGFA-222ENST00000520948 DAND5Q8N907 189 aa11.18□□□□□ -0.62
VEGFA-222ENST00000520948 PSORS1C2Q9UIG4 136 aa11.18□□□□□ -0.62
VEGFA-222ENST00000520948 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
VEGFA-222ENST00000520948 LINC00167Q96N53 147 aa11.17□□□□□ -0.62
VEGFA-222ENST00000520948 HSBP1L1C9JCN9 74 aa11.15□□□□□ -0.62
VEGFA-222ENST00000520948 NKAPP1Q8N9T2 125 aa11.15□□□□□ -0.62
VEGFA-222ENST00000520948 SOSTDC1Q6X4U4 206 aa11.14□□□□□ -0.63
VEGFA-222ENST00000520948 BOD1L2Q8IYS8 172 aa11.14□□□□□ -0.63
VEGFA-222ENST00000520948 EIF4EBP3O60516 100 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-222ENST00000520948 UBE2BP63146 152 aa11.13□□□□□ -0.63
VEGFA-222ENST00000520948 SRSF9Q13242 221 aaKnown RBP eCLIP11.13□□□□□ -0.63
VEGFA-222ENST00000520948 IGLV1-50A0A075B6I6 118 aa11.11□□□□□ -0.63
VEGFA-222ENST00000520948 GAGE10A6NGK3 116 aa11.1□□□□□ -0.63
VEGFA-222ENST00000520948 RPL37AP8A6NKH3 93 aa11.1□□□□□ -0.63
VEGFA-222ENST00000520948 M0R378 163 aa11.1□□□□□ -0.63
VEGFA-222ENST00000520948 PYY3Q5JQD4 70 aa11.1□□□□□ -0.63
VEGFA-222ENST00000520948 C1orf137Q5JT78 98 aa11.1□□□□□ -0.63
VEGFA-222ENST00000520948 NDUFC2O95298 119 aa11.09□□□□□ -0.63
VEGFA-222ENST00000520948 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
VEGFA-222ENST00000520948 LINC00308Q8TCZ7 52 aa11.09□□□□□ -0.63
VEGFA-222ENST00000520948 SPANXDQ9BXN6 97 aa11.09□□□□□ -0.63
VEGFA-222ENST00000520948 SPANXCQ9NY87 97 aa11.09□□□□□ -0.63
VEGFA-222ENST00000520948 IGLV7-43P04211 117 aa11.08□□□□□ -0.64
VEGFA-222ENST00000520948 NPC2P61916 151 aa11.08□□□□□ -0.64
VEGFA-222ENST00000520948 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
VEGFA-222ENST00000520948 MIEN1Q9BRT3 115 aa11.07□□□□□ -0.64
VEGFA-222ENST00000520948 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
VEGFA-222ENST00000520948 COX8AP10176 69 aa11.06□□□□□ -0.64
VEGFA-222ENST00000520948 PPDPFQ9H3Y8 114 aa11.06□□□□□ -0.64
VEGFA-222ENST00000520948 IGKV2-28A0A075B6P5 120 aa11.05□□□□□ -0.64
VEGFA-222ENST00000520948 NCR3O14931 201 aa11.05□□□□□ -0.64
VEGFA-222ENST00000520948 DLEU1O43261 78 aa11.05□□□□□ -0.64
VEGFA-222ENST00000520948 IGKV2D-28P01615 120 aa11.05□□□□□ -0.64
VEGFA-222ENST00000520948 SPINK6Q6UWN8 80 aa11.05□□□□□ -0.64
VEGFA-222ENST00000520948 Q6ZVH6 145 aa11.05□□□□□ -0.64
VEGFA-222ENST00000520948 TNXBP22105 4242 aa11.04□□□□□ -0.64
VEGFA-222ENST00000520948 SPATA45Q537H7 98 aa11.04□□□□□ -0.64
VEGFA-222ENST00000520948 VAMP8Q9BV40 100 aa11.04□□□□□ -0.64
VEGFA-222ENST00000520948 PAM16Q9Y3D7 125 aa11.04□□□□□ -0.64
VEGFA-222ENST00000520948 IFITM1P13164 125 aa11.03□□□□□ -0.64
VEGFA-222ENST00000520948 SPANXB1Q9NS25 103 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-222ENST00000520948 BCE1O60756 84 aa11.02□□□□□ -0.65
VEGFA-222ENST00000520948 LRP2P98164 4655 aa11.02□□□□□ -0.65
VEGFA-222ENST00000520948 C14orf144Q96I85 54 aa11.01□□□□□ -0.65
VEGFA-222ENST00000520948 TMEM126AQ9H061 195 aa11.01□□□□□ -0.65
VEGFA-222ENST00000520948 KCNQ1DNQ9H478 68 aa11.01□□□□□ -0.65
VEGFA-222ENST00000520948 TRBV10-3A0A0K0K1G6 114 aa11□□□□□ -0.65
VEGFA-222ENST00000520948 REG3GQ6UW15 175 aa11□□□□□ -0.65
VEGFA-222ENST00000520948 MUSTN1Q8IVN3 82 aa11□□□□□ -0.65
VEGFA-222ENST00000520948 ZNF861PO60384 105 aa10.99□□□□□ -0.65
VEGFA-222ENST00000520948 IGLV6-57P01721 117 aa10.99□□□□□ -0.65
VEGFA-222ENST00000520948 KRTAP13-1Q8IUC0 172 aa10.99□□□□□ -0.65
VEGFA-222ENST00000520948 LINC01600Q96MT4 127 aa10.99□□□□□ -0.65
VEGFA-222ENST00000520948 SPRR1AP35321 89 aa10.98□□□□□ -0.65
VEGFA-222ENST00000520948 COPS9Q8WXC6 57 aa10.98□□□□□ -0.65
VEGFA-222ENST00000520948 PRYO14603 147 aa10.97□□□□□ -0.65
VEGFA-222ENST00000520948 DDTP30046 118 aa10.97□□□□□ -0.65
VEGFA-222ENST00000520948 RNF213Q63HN8 5207 aa10.97□□□□□ -0.65
VEGFA-222ENST00000520948 KRTAP4-16G5E9R7 235 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-222ENST00000520948 LINC00518Q8N0U6 118 aa10.96□□□□□ -0.65
VEGFA-222ENST00000520948 H0Y9J4 135 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms