RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 TSPEAR-AS2P59090 65 aa9.56□□□□□ -0.88
HDAC2-209ENST00000520895 PLA2G2DQ9UNK4 145 aa9.56□□□□□ -0.88
HDAC2-209ENST00000520895 HERC1Q15751 4861 aa9.56□□□□□ -0.88
HDAC2-209ENST00000520895 E9PLD3 99 aa9.55□□□□□ -0.88
HDAC2-209ENST00000520895 SMIM13P0DJ93 91 aa9.55□□□□□ -0.88
HDAC2-209ENST00000520895 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
HDAC2-209ENST00000520895 MRPL55Q7Z7F7 128 aaKnown RBP9.55□□□□□ -0.88
HDAC2-209ENST00000520895 NKAPP1Q8N9T2 125 aa9.55□□□□□ -0.88
HDAC2-209ENST00000520895 FAT3Q8TDW7 4589 aa9.54□□□□□ -0.88
HDAC2-209ENST00000520895 NMUP48645 174 aa9.54□□□□□ -0.88
HDAC2-209ENST00000520895 HIST3H2BBQ8N257 126 aa9.54□□□□□ -0.88
HDAC2-209ENST00000520895 TP73-AS1Q9UF72 201 aa9.54□□□□□ -0.88
HDAC2-209ENST00000520895 RPL24P83731 157 aaKnown RBP9.53□□□□□ -0.88
HDAC2-209ENST00000520895 KRTAP11-1Q8IUC1 163 aa9.53□□□□□ -0.88
HDAC2-209ENST00000520895 LRP1Q07954 4544 aaKnown RBP9.53□□□□□ -0.88
HDAC2-209ENST00000520895 HIST1H2BLQ99880 126 aa9.52□□□□□ -0.89
HDAC2-209ENST00000520895 IGLV5-37A0A075B6J1 123 aa9.51□□□□□ -0.89
HDAC2-209ENST00000520895 GAGE10A6NGK3 116 aa9.51□□□□□ -0.89
HDAC2-209ENST00000520895 J3QL48 77 aa9.51□□□□□ -0.89
HDAC2-209ENST00000520895 AKR1D1P51857 326 aa9.51□□□□□ -0.89
HDAC2-209ENST00000520895 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
HDAC2-209ENST00000520895 SPINK6Q6UWN8 80 aa9.51□□□□□ -0.89
HDAC2-209ENST00000520895 MIR7-3HGQ8N6C7 128 aa9.51□□□□□ -0.89
HDAC2-209ENST00000520895 LINC00167Q96N53 147 aa9.5□□□□□ -0.89
HDAC2-209ENST00000520895 RPL37AP8A6NKH3 93 aa9.49□□□□□ -0.89
HDAC2-209ENST00000520895 IGLV7-43P04211 117 aa9.49□□□□□ -0.89
HDAC2-209ENST00000520895 VPREB1P12018 145 aa9.49□□□□□ -0.89
HDAC2-209ENST00000520895 SNRPEP62304 92 aaKnown RBP9.49□□□□□ -0.89
HDAC2-209ENST00000520895 KRTAP29-1A8MX34 341 aaPredicted RBP9.48□□□□□ -0.89
HDAC2-209ENST00000520895 OXTP01178 125 aa9.48□□□□□ -0.89
HDAC2-209ENST00000520895 SRSF9Q13242 221 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC2-209ENST00000520895 ATOH7Q8N100 152 aa9.48□□□□□ -0.89
HDAC2-209ENST00000520895 BOD1L2Q8IYS8 172 aa9.47□□□□□ -0.89
HDAC2-209ENST00000520895 A0A0J9YXY3 114 aa9.46□□□□□ -0.9
HDAC2-209ENST00000520895 DAND5Q8N907 189 aa9.46□□□□□ -0.9
HDAC2-209ENST00000520895 DMBT1Q9UGM3 2413 aaPredicted RBP9.46□□□□□ -0.9
HDAC2-209ENST00000520895 IGKV2-28A0A075B6P5 120 aa9.45□□□□□ -0.9
HDAC2-209ENST00000520895 IGKV2D-26A0A0A0MRZ7 120 aa9.45□□□□□ -0.9
HDAC2-209ENST00000520895 ZNF815PA8K554 130 aa9.45□□□□□ -0.9
HDAC2-209ENST00000520895 IGKV2D-28P01615 120 aa9.45□□□□□ -0.9
HDAC2-209ENST00000520895 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
HDAC2-209ENST00000520895 Q8NDZ9 215 aa9.45□□□□□ -0.9
HDAC2-209ENST00000520895 MIEN1Q9BRT3 115 aa9.45□□□□□ -0.9
HDAC2-209ENST00000520895 C5orf52A6NGY3 159 aa9.44□□□□□ -0.9
HDAC2-209ENST00000520895 DIRC1Q969H9 104 aa9.44□□□□□ -0.9
HDAC2-209ENST00000520895 IGLV1-50A0A075B6I6 118 aa9.42□□□□□ -0.9
HDAC2-209ENST00000520895 M0R378 163 aa9.42□□□□□ -0.9
HDAC2-209ENST00000520895 BCE1O60756 84 aa9.42□□□□□ -0.9
HDAC2-209ENST00000520895 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
HDAC2-209ENST00000520895 TTTY13Q9BZ97 58 aa9.42□□□□□ -0.9
HDAC2-209ENST00000520895 NCR3O14931 201 aa9.41□□□□□ -0.9
HDAC2-209ENST00000520895 LOC107984156A0A0G2JMH3 177 aa9.4□□□□□ -0.9
HDAC2-209ENST00000520895 HSBP1L1C9JCN9 74 aa9.4□□□□□ -0.9
HDAC2-209ENST00000520895 ZNF861PO60384 105 aa9.4□□□□□ -0.9
HDAC2-209ENST00000520895 TIMM17BO60830 172 aa9.4□□□□□ -0.9
HDAC2-209ENST00000520895 SCGB1D1O95968 90 aa9.4□□□□□ -0.9
HDAC2-209ENST00000520895 NPC2P61916 151 aa9.4□□□□□ -0.9
HDAC2-209ENST00000520895 ADAMTSL4-AS1Q5T5F5 129 aa9.4□□□□□ -0.9
HDAC2-209ENST00000520895 ARL17AQ8IVW1 177 aa9.4□□□□□ -0.9
HDAC2-209ENST00000520895 H0Y9J4 135 aa9.39□□□□□ -0.91
HDAC2-209ENST00000520895 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
HDAC2-209ENST00000520895 SCGB1D4Q6XE38 83 aa9.39□□□□□ -0.91
HDAC2-209ENST00000520895 TMEM238C9JI98 176 aa9.38□□□□□ -0.91
HDAC2-209ENST00000520895 UBE2AP49459 152 aa9.38□□□□□ -0.91
HDAC2-209ENST00000520895 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
HDAC2-209ENST00000520895 TMEM126AQ9H061 195 aa9.37□□□□□ -0.91
HDAC2-209ENST00000520895 S100A12P80511 92 aa9.36□□□□□ -0.91
HDAC2-209ENST00000520895 PCP2Q8IVA1 136 aa9.36□□□□□ -0.91
HDAC2-209ENST00000520895 LITAFQ99732 161 aa9.36□□□□□ -0.91
HDAC2-209ENST00000520895 SPANXB1Q9NS25 103 aaPredicted RBP9.36□□□□□ -0.91
HDAC2-209ENST00000520895 NDUFC2O95298 119 aa9.35□□□□□ -0.91
HDAC2-209ENST00000520895 SOSTDC1Q6X4U4 206 aa9.35□□□□□ -0.91
HDAC2-209ENST00000520895 FAM19A1Q7Z5A9 133 aa9.35□□□□□ -0.91
HDAC2-209ENST00000520895 LINC00308Q8TCZ7 52 aa9.35□□□□□ -0.91
HDAC2-209ENST00000520895 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
HDAC2-209ENST00000520895 TRBV10-2A0A0K0K1G8 114 aa9.34□□□□□ -0.91
HDAC2-209ENST00000520895 TNXBP22105 4242 aa9.34□□□□□ -0.91
HDAC2-209ENST00000520895 PRYO14603 147 aa9.33□□□□□ -0.92
HDAC2-209ENST00000520895 EIF4EBP3O60516 100 aaPredicted RBP9.33□□□□□ -0.92
HDAC2-209ENST00000520895 S100A7L2Q5SY68 101 aa9.33□□□□□ -0.92
HDAC2-209ENST00000520895 MT1HL1P0DM35 61 aa9.32□□□□□ -0.92
HDAC2-209ENST00000520895 DDTP30046 118 aa9.32□□□□□ -0.92
HDAC2-209ENST00000520895 PRLHP81277 87 aa9.32□□□□□ -0.92
HDAC2-209ENST00000520895 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
HDAC2-209ENST00000520895 TMA7Q9Y2S6 64 aaKnown RBP9.32□□□□□ -0.92
HDAC2-209ENST00000520895 KRTAP13-1Q8IUC0 172 aa9.31□□□□□ -0.92
HDAC2-209ENST00000520895 COPS9Q8WXC6 57 aa9.31□□□□□ -0.92
HDAC2-209ENST00000520895 SPANXDQ9BXN6 97 aa9.31□□□□□ -0.92
HDAC2-209ENST00000520895 SPANXCQ9NY87 97 aa9.31□□□□□ -0.92
HDAC2-209ENST00000520895 Q6ZVH6 145 aa9.29□□□□□ -0.92
HDAC2-209ENST00000520895 ETDCA0A1B0GVM5 59 aa9.28□□□□□ -0.92
HDAC2-209ENST00000520895 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
HDAC2-209ENST00000520895 LINC00337Q8N6G1 96 aa9.28□□□□□ -0.92
HDAC2-209ENST00000520895 KRTAP1-4P0C5Y4 121 aa9.27□□□□□ -0.93
HDAC2-209ENST00000520895 IFITM1P13164 125 aa9.27□□□□□ -0.93
HDAC2-209ENST00000520895 SPRR1AP35321 89 aa9.27□□□□□ -0.93
HDAC2-209ENST00000520895 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
HDAC2-209ENST00000520895 OR13C6PQ8NH95 151 aa9.27□□□□□ -0.93
HDAC2-209ENST00000520895 HIGD2AQ9BW72 106 aa9.27□□□□□ -0.93
HDAC2-209ENST00000520895 LINC00518Q8N0U6 118 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms