RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 SMR3BP02814 79 aaPredicted RBP10.9□□□□□ -0.66
TRAM1-203ENST00000520700 LITAFQ99732 161 aa10.9□□□□□ -0.66
TRAM1-203ENST00000520700 SERTAD4-AS1Q5TG53 156 aa10.89□□□□□ -0.67
TRAM1-203ENST00000520700 LINC00528Q8N1L1 170 aa10.89□□□□□ -0.67
TRAM1-203ENST00000520700 FAM229AH3BQW9 127 aa10.88□□□□□ -0.67
TRAM1-203ENST00000520700 RPL24P83731 157 aaKnown RBP10.88□□□□□ -0.67
TRAM1-203ENST00000520700 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
TRAM1-203ENST00000520700 FAM19A5Q7Z5A7 132 aaPredicted RBP10.88□□□□□ -0.67
TRAM1-203ENST00000520700 C7orf33Q8WU49 177 aa10.88□□□□□ -0.67
TRAM1-203ENST00000520700 KRTAP17-1Q9BYP8 105 aa10.88□□□□□ -0.67
TRAM1-203ENST00000520700 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
TRAM1-203ENST00000520700 VPREB1P12018 145 aa10.87□□□□□ -0.67
TRAM1-203ENST00000520700 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
TRAM1-203ENST00000520700 M0QXV9 152 aa10.86□□□□□ -0.67
TRAM1-203ENST00000520700 DLEU1O43261 78 aa10.86□□□□□ -0.67
TRAM1-203ENST00000520700 COX8AP10176 69 aa10.86□□□□□ -0.67
TRAM1-203ENST00000520700 LBHQ53QV2 105 aaPredicted RBP10.86□□□□□ -0.67
TRAM1-203ENST00000520700 SCGB1D4Q6XE38 83 aa10.86□□□□□ -0.67
TRAM1-203ENST00000520700 PHF5AQ7RTV0 110 aaKnown RBP10.86□□□□□ -0.67
TRAM1-203ENST00000520700 BOD1L2Q8IYS8 172 aa10.86□□□□□ -0.67
TRAM1-203ENST00000520700 Q6ZVH6 145 aa10.85□□□□□ -0.67
TRAM1-203ENST00000520700 PPDPFQ9H3Y8 114 aa10.85□□□□□ -0.67
TRAM1-203ENST00000520700 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
TRAM1-203ENST00000520700 SPATA45Q537H7 98 aa10.84□□□□□ -0.67
TRAM1-203ENST00000520700 MRPL55Q7Z7F7 128 aaKnown RBP10.84□□□□□ -0.67
TRAM1-203ENST00000520700 DAND5Q8N907 189 aa10.84□□□□□ -0.67
TRAM1-203ENST00000520700 SPANXDQ9BXN6 97 aa10.84□□□□□ -0.67
TRAM1-203ENST00000520700 SPANXCQ9NY87 97 aa10.84□□□□□ -0.67
TRAM1-203ENST00000520700 NDUFC2O95298 119 aa10.83□□□□□ -0.68
TRAM1-203ENST00000520700 PLA2G1BP04054 148 aaKnown RBP10.83□□□□□ -0.68
TRAM1-203ENST00000520700 Q8NDZ9 215 aa10.83□□□□□ -0.68
TRAM1-203ENST00000520700 PAM16Q9Y3D7 125 aa10.83□□□□□ -0.68
TRAM1-203ENST00000520700 KRTAP10-4P60372 401 aaPredicted RBP10.82□□□□□ -0.68
TRAM1-203ENST00000520700 Q5VSD8 79 aa10.82□□□□□ -0.68
TRAM1-203ENST00000520700 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
TRAM1-203ENST00000520700 LINC00308Q8TCZ7 52 aa10.82□□□□□ -0.68
TRAM1-203ENST00000520700 VPS13BQ7Z7G8 4022 aa10.81□□□□□ -0.68
TRAM1-203ENST00000520700 IFITM1P13164 125 aa10.81□□□□□ -0.68
TRAM1-203ENST00000520700 SOSTDC1Q6X4U4 206 aa10.81□□□□□ -0.68
TRAM1-203ENST00000520700 LINC00167Q96N53 147 aa10.81□□□□□ -0.68
TRAM1-203ENST00000520700 MIEN1Q9BRT3 115 aa10.81□□□□□ -0.68
TRAM1-203ENST00000520700 M0R378 163 aa10.8□□□□□ -0.68
TRAM1-203ENST00000520700 RPL37AP61513 92 aaKnown RBP10.8□□□□□ -0.68
TRAM1-203ENST00000520700 COPS9Q8WXC6 57 aa10.8□□□□□ -0.68
TRAM1-203ENST00000520700 SPANXB1Q9NS25 103 aaPredicted RBP10.8□□□□□ -0.68
TRAM1-203ENST00000520700 TRBV10-2A0A0K0K1G8 114 aa10.79□□□□□ -0.68
TRAM1-203ENST00000520700 EIF4EBP3O60516 100 aaPredicted RBP10.79□□□□□ -0.68
TRAM1-203ENST00000520700 LOC105371267A0A1B0GV96 52 aa10.78□□□□□ -0.68
TRAM1-203ENST00000520700 KRTAP11-1Q8IUC1 163 aa10.78□□□□□ -0.68
TRAM1-203ENST00000520700 C14orf144Q96I85 54 aa10.78□□□□□ -0.68
TRAM1-203ENST00000520700 UBE2BP63146 152 aa10.77□□□□□ -0.69
TRAM1-203ENST00000520700 PRR3P79522 188 aaKnown RBP10.77□□□□□ -0.69
TRAM1-203ENST00000520700 SLC25A34Q6PIV7 304 aa10.77□□□□□ -0.69
TRAM1-203ENST00000520700 PSORS1C2Q9UIG4 136 aa10.77□□□□□ -0.69
TRAM1-203ENST00000520700 IGLV1-50A0A075B6I6 118 aa10.76□□□□□ -0.69
TRAM1-203ENST00000520700 S100A12P80511 92 aa10.76□□□□□ -0.69
TRAM1-203ENST00000520700 HIGD1BQ9P298 99 aa10.76□□□□□ -0.69
TRAM1-203ENST00000520700 SRRM2Q9UQ35 2752 aaKnown RBP10.75□□□□□ -0.69
TRAM1-203ENST00000520700 SMIM6P0DI80 62 aa10.74□□□□□ -0.69
TRAM1-203ENST00000520700 KRTAP4-5Q9BYR2 181 aa10.74□□□□□ -0.69
TRAM1-203ENST00000520700 ABCA13Q86UQ4 5058 aa10.74□□□□□ -0.69
TRAM1-203ENST00000520700 GAGE10A6NGK3 116 aa10.73□□□□□ -0.69
TRAM1-203ENST00000520700 NPC2P61916 151 aa10.73□□□□□ -0.69
TRAM1-203ENST00000520700 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAM1-203ENST00000520700 MUSTN1Q8IVN3 82 aa10.73□□□□□ -0.69
TRAM1-203ENST00000520700 LINC00518Q8N0U6 118 aa10.73□□□□□ -0.69
TRAM1-203ENST00000520700 RPL37AP8A6NKH3 93 aa10.72□□□□□ -0.69
TRAM1-203ENST00000520700 NCR3O14931 201 aa10.71□□□□□ -0.69
TRAM1-203ENST00000520700 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
TRAM1-203ENST00000520700 C2orf91Q6ZV80 131 aa10.7□□□□□ -0.7
TRAM1-203ENST00000520700 KCNQ1DNQ9H478 68 aa10.7□□□□□ -0.7
TRAM1-203ENST00000520700 IGKV2-28A0A075B6P5 120 aa10.69□□□□□ -0.7
TRAM1-203ENST00000520700 IGKV2D-28P01615 120 aa10.69□□□□□ -0.7
TRAM1-203ENST00000520700 IGLV6-57P01721 117 aa10.69□□□□□ -0.7
TRAM1-203ENST00000520700 BCE1O60756 84 aa10.68□□□□□ -0.7
TRAM1-203ENST00000520700 IGLV7-43P04211 117 aa10.68□□□□□ -0.7
TRAM1-203ENST00000520700 TRBV10-3A0A0K0K1G6 114 aa10.67□□□□□ -0.7
TRAM1-203ENST00000520700 PRYO14603 147 aa10.67□□□□□ -0.7
TRAM1-203ENST00000520700 DDTP30046 118 aa10.67□□□□□ -0.7
TRAM1-203ENST00000520700 TAL2Q16559 108 aa10.67□□□□□ -0.7
TRAM1-203ENST00000520700 HIST1H4GQ99525 98 aa10.67□□□□□ -0.7
TRAM1-203ENST00000520700 TMEM126AQ9H061 195 aa10.67□□□□□ -0.7
TRAM1-203ENST00000520700 UQCR10Q9UDW1 63 aa10.67□□□□□ -0.7
TRAM1-203ENST00000520700 SPRR1AP35321 89 aa10.66□□□□□ -0.7
TRAM1-203ENST00000520700 REG3GQ6UW15 175 aa10.66□□□□□ -0.7
TRAM1-203ENST00000520700 SPINK6Q6UWN8 80 aa10.66□□□□□ -0.7
TRAM1-203ENST00000520700 CBY1Q9Y3M2 126 aa10.66□□□□□ -0.7
TRAM1-203ENST00000520700 PKHD1L1Q86WI1 4243 aa10.66□□□□□ -0.7
TRAM1-203ENST00000520700 HNRNPA3P51991 378 aaKnown RBP10.65□□□□□ -0.7
TRAM1-203ENST00000520700 S100A7L2Q5SY68 101 aa10.65□□□□□ -0.7
TRAM1-203ENST00000520700 INAFM2P0DMQ5 153 aa10.64□□□□□ -0.71
TRAM1-203ENST00000520700 LINC00337Q8N6G1 96 aa10.64□□□□□ -0.71
TRAM1-203ENST00000520700 ZNF861PO60384 105 aa10.63□□□□□ -0.71
TRAM1-203ENST00000520700 PCLOQ9Y6V0 5065 aa10.62□□□□□ -0.71
TRAM1-203ENST00000520700 A4D1N5 150 aa10.62□□□□□ -0.71
TRAM1-203ENST00000520700 H0Y9J4 135 aa10.62□□□□□ -0.71
TRAM1-203ENST00000520700 KRTAP13-1Q8IUC0 172 aa10.62□□□□□ -0.71
TRAM1-203ENST00000520700 TRAV13-2A0A0B4J235 113 aa10.61□□□□□ -0.71
TRAM1-203ENST00000520700 KRTAP4-16G5E9R7 235 aaPredicted RBP10.61□□□□□ -0.71
TRAM1-203ENST00000520700 RPL28P46779 137 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms