RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 A0A087WYN8 130 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 A0A096LNJ9 63 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 SDHAF1A6NFY7 115 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 CHTF8P0CG12 524 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 FCER1GP30273 86 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 C15orf56Q8N910 161 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 SPACA4Q8TDM5 124 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 KIR2DL4Q99706 377 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 MAP1LC3CQ9BXW4 147 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 PLAC8Q9NZF1 115 aa5.87□□□□□ -1.47
CTNNA1-221ENST00000520339 TRBV27A0A0K0K1C4 114 aa5.86□□□□□ -1.47
CTNNA1-221ENST00000520339 H7C423 109 aa5.86□□□□□ -1.47
CTNNA1-221ENST00000520339 COX8AP10176 69 aa5.86□□□□□ -1.47
CTNNA1-221ENST00000520339 POLR2KP53803 58 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-221ENST00000520339 Q75L30 129 aa5.86□□□□□ -1.47
CTNNA1-221ENST00000520339 DPH3Q96FX2 82 aa5.86□□□□□ -1.47
CTNNA1-221ENST00000520339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 IGKV3OR2-268A0A0C4DH90 116 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 IGKV2-29A2NJV5 120 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 LINC01549A6NIU2 74 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 I3L3M4 83 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 ATP5LO75964 103 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 FGF6P10767 208 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 Q6ZRU5 148 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 Q6ZUT4 128 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 LINC00173Q6ZV60 143 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 CHCHD10Q8WYQ3 142 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 IFI27L1Q96BM0 104 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
CTNNA1-221ENST00000520339 GVQW2A0A096LPI5 108 aaPredicted RBP5.84□□□□□ -1.47
CTNNA1-221ENST00000520339 H3BMG7 143 aa5.84□□□□□ -1.47
CTNNA1-221ENST00000520339 H3BUT2 72 aa5.84□□□□□ -1.47
CTNNA1-221ENST00000520339 J3KT08 172 aa5.84□□□□□ -1.47
CTNNA1-221ENST00000520339 COX6A2Q02221 97 aa5.84□□□□□ -1.47
CTNNA1-221ENST00000520339 HIGD2BQ4VC39 106 aa5.84□□□□□ -1.47
CTNNA1-221ENST00000520339 TNXBP22105 4242 aa5.83□□□□□ -1.48
CTNNA1-221ENST00000520339 TSHBP01222 138 aa5.83□□□□□ -1.48
CTNNA1-221ENST00000520339 PMVKQ15126 192 aa5.83□□□□□ -1.48
CTNNA1-221ENST00000520339 C2orf66Q6UXQ4 117 aa5.83□□□□□ -1.48
CTNNA1-221ENST00000520339 TOMM6Q96B49 74 aa5.83□□□□□ -1.48
CTNNA1-221ENST00000520339 IGKV2-30P06310 120 aa5.82□□□□□ -1.48
CTNNA1-221ENST00000520339 SMIM13P0DJ93 91 aa5.82□□□□□ -1.48
CTNNA1-221ENST00000520339 NDUFV3P56181 108 aaKnown RBP5.82□□□□□ -1.48
CTNNA1-221ENST00000520339 LINC01545Q5VT33 79 aa5.82□□□□□ -1.48
CTNNA1-221ENST00000520339 SCGB3A1Q96QR1 104 aa5.82□□□□□ -1.48
CTNNA1-221ENST00000520339 PPDPFQ9H3Y8 114 aa5.82□□□□□ -1.48
CTNNA1-221ENST00000520339 LINC00959A0A1B0GUT2 108 aa5.81□□□□□ -1.48
CTNNA1-221ENST00000520339 IFITM1P13164 125 aa5.81□□□□□ -1.48
CTNNA1-221ENST00000520339 XCL1P47992 114 aa5.81□□□□□ -1.48
CTNNA1-221ENST00000520339 HIGD1BQ9P298 99 aa5.81□□□□□ -1.48
CTNNA1-221ENST00000520339 IGHV1-58A0A0C4DH39 117 aa5.8□□□□□ -1.48
CTNNA1-221ENST00000520339 IGKV2-24A0A0C4DH68 120 aa5.8□□□□□ -1.48
CTNNA1-221ENST00000520339 C2orf91Q6ZV80 131 aa5.8□□□□□ -1.48
CTNNA1-221ENST00000520339 ATOH7Q8N100 152 aa5.8□□□□□ -1.48
CTNNA1-221ENST00000520339 C7orf33Q8WU49 177 aa5.8□□□□□ -1.48
CTNNA1-221ENST00000520339 TMEM141Q96I45 108 aa5.8□□□□□ -1.48
CTNNA1-221ENST00000520339 TMEM101Q96IK0 257 aa5.8□□□□□ -1.48
CTNNA1-221ENST00000520339 TIMM17AQ99595 171 aa5.8□□□□□ -1.48
CTNNA1-221ENST00000520339 CDC42SE2Q9NRR3 84 aa5.8□□□□□ -1.48
CTNNA1-221ENST00000520339 A0A096LNI7 61 aa5.79□□□□□ -1.48
CTNNA1-221ENST00000520339 E9PLD3 99 aa5.79□□□□□ -1.48
CTNNA1-221ENST00000520339 RPL39P62891 51 aaKnown RBP5.79□□□□□ -1.48
CTNNA1-221ENST00000520339 CD164L2Q6UWJ8 174 aa5.79□□□□□ -1.48
CTNNA1-221ENST00000520339 PPDPFLQ8WWR9 84 aa5.79□□□□□ -1.48
CTNNA1-221ENST00000520339 LINC00526Q96FQ7 95 aa5.79□□□□□ -1.48
CTNNA1-221ENST00000520339 TRAV12-1A0A0B4J245 112 aa5.78□□□□□ -1.48
CTNNA1-221ENST00000520339 IGIPA6NJ69 53 aa5.78□□□□□ -1.48
CTNNA1-221ENST00000520339 PRR3P79522 188 aaKnown RBP5.78□□□□□ -1.48
CTNNA1-221ENST00000520339 SS18Q15532 418 aa5.78□□□□□ -1.48
CTNNA1-221ENST00000520339 TAL2Q16559 108 aa5.78□□□□□ -1.48
CTNNA1-221ENST00000520339 LINC00474Q9P2X8 69 aa5.78□□□□□ -1.48
CTNNA1-221ENST00000520339 DPM2O94777 84 aa5.77□□□□□ -1.49
CTNNA1-221ENST00000520339 APOMO95445 188 aa5.77□□□□□ -1.49
CTNNA1-221ENST00000520339 MT-ATP8P03928 68 aa5.77□□□□□ -1.49
CTNNA1-221ENST00000520339 PLNP26678 52 aa5.77□□□□□ -1.49
CTNNA1-221ENST00000520339 LYRM7Q5U5X0 104 aa5.77□□□□□ -1.49
CTNNA1-221ENST00000520339 CARD19Q96LW7 228 aa5.77□□□□□ -1.49
CTNNA1-221ENST00000520339 LINC01600Q96MT4 127 aa5.77□□□□□ -1.49
CTNNA1-221ENST00000520339 PRO0461Q9UI25 63 aa5.77□□□□□ -1.49
CTNNA1-221ENST00000520339 PYGO1Q9Y3Y4 419 aa5.77□□□□□ -1.49
CTNNA1-221ENST00000520339 F8VRH5 84 aa5.76□□□□□ -1.49
CTNNA1-221ENST00000520339 IGKCP01834 107 aa5.76□□□□□ -1.49
CTNNA1-221ENST00000520339 SEC61GP60059 68 aa5.76□□□□□ -1.49
CTNNA1-221ENST00000520339 SYCNQ0VAF6 134 aa5.76□□□□□ -1.49
CTNNA1-221ENST00000520339 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
CTNNA1-221ENST00000520339 MRPL35Q9NZE8 188 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-221ENST00000520339 PKIGQ9Y2B9 76 aa5.76□□□□□ -1.49
CTNNA1-221ENST00000520339 IGLV4-3A0A075B6K6 122 aa5.75□□□□□ -1.49
CTNNA1-221ENST00000520339 SRSF9Q13242 221 aaKnown RBP eCLIP5.75□□□□□ -1.49
CTNNA1-221ENST00000520339 TIMM21Q9BVV7 248 aa5.75□□□□□ -1.49
CTNNA1-221ENST00000520339 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
CTNNA1-221ENST00000520339 LRP2P98164 4655 aa5.74□□□□□ -1.49
CTNNA1-221ENST00000520339 IGLV4-69A0A075B6H9 119 aa5.74□□□□□ -1.49
CTNNA1-221ENST00000520339 A0A1W2PNN7 141 aa5.74□□□□□ -1.49
CTNNA1-221ENST00000520339 C9JAW5 83 aa5.74□□□□□ -1.49
CTNNA1-221ENST00000520339 CCDC179H3BU77 68 aa5.74□□□□□ -1.49
CTNNA1-221ENST00000520339 COX7A2LO14548 114 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms