RNA–Protein interactions for RNA: ENST00000519047.5

HMBOX1-206, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-206ENST00000519047 PET117Q6UWS5 81 aa4.01□□□□□ -1.77
HMBOX1-206ENST00000519047 FAM168BA1KXE4 195 aa4□□□□□ -1.77
HMBOX1-206ENST00000519047 COX17Q14061 63 aa4□□□□□ -1.77
HMBOX1-206ENST00000519047 HIST3H2BBQ8N257 126 aa4□□□□□ -1.77
HMBOX1-206ENST00000519047 LEPROTO15243 131 aa3.99□□□□□ -1.77
HMBOX1-206ENST00000519047 RPL37AP61513 92 aaKnown RBP3.99□□□□□ -1.77
HMBOX1-206ENST00000519047 FAT3Q8TDW7 4589 aa3.99□□□□□ -1.77
HMBOX1-206ENST00000519047 XAGE1AQ9HD64 81 aa3.99□□□□□ -1.77
HMBOX1-206ENST00000519047 ERG28Q9UKR5 140 aa3.99□□□□□ -1.77
HMBOX1-206ENST00000519047 J3QQQ9 107 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 INAFM2P0DMQ5 153 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 PFN2P35080 140 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 TSPEAR-AS2P59090 65 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 SERTAD4-AS1Q5TG53 156 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 C7orf33Q8WU49 177 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 PLEKHB2Q96CS7 222 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 HIST1H2BLQ99880 126 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 NDUFA12Q9UI09 145 aa3.98□□□□□ -1.77
HMBOX1-206ENST00000519047 C5orf52A6NGY3 159 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 E9PLD3 99 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 S100A6P06703 90 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 KRTDAPP60985 99 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 HERVK_113P61574 105 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 SNRPEP62304 92 aaKnown RBP3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 HERV-K104P63124 156 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 PHF5AQ7RTV0 110 aaKnown RBP3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 MYMXA0A1B0GTQ4 84 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 S100A2P29034 98 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 NMUP48645 174 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 HNRNPA3P51991 378 aaKnown RBP3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 FAM19A5Q7Z5A7 132 aaPredicted RBP3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 KRTAP11-1Q8IUC1 163 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 SND1-IT1Q9HBX3 110 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 TP73-AS1Q9UF72 201 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 PSORS1C2Q9UIG4 136 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 C22orf24Q9Y442 160 aa3.97□□□□□ -1.77
HMBOX1-206ENST00000519047 IGLV5-37A0A075B6J1 123 aa3.96□□□□□ -1.78
HMBOX1-206ENST00000519047 LINC00587B1AMM8 73 aa3.96□□□□□ -1.78
HMBOX1-206ENST00000519047 M0QXV9 152 aa3.96□□□□□ -1.78
HMBOX1-206ENST00000519047 SMIM13P0DJ93 91 aa3.96□□□□□ -1.78
HMBOX1-206ENST00000519047 LINC00158P58513 81 aa3.96□□□□□ -1.78
HMBOX1-206ENST00000519047 PRR3P79522 188 aaKnown RBP3.96□□□□□ -1.78
HMBOX1-206ENST00000519047 TNXBP22105 4242 aa3.96□□□□□ -1.78
HMBOX1-206ENST00000519047 IGKV2D-26A0A0A0MRZ7 120 aa3.95□□□□□ -1.78
HMBOX1-206ENST00000519047 LOC107984156A0A0G2JMH3 177 aa3.95□□□□□ -1.78
HMBOX1-206ENST00000519047 A0A0U1RRA0 63 aa3.95□□□□□ -1.78
HMBOX1-206ENST00000519047 C20orf202A1L168 122 aa3.95□□□□□ -1.78
HMBOX1-206ENST00000519047 LGALS3P17931 250 aaKnown RBP3.95□□□□□ -1.78
HMBOX1-206ENST00000519047 AKR1D1P51857 326 aa3.95□□□□□ -1.78
HMBOX1-206ENST00000519047 SRSF9Q13242 221 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMBOX1-206ENST00000519047 ARL17AQ8IVW1 177 aa3.95□□□□□ -1.78
HMBOX1-206ENST00000519047 HERC1Q15751 4861 aa3.95□□□□□ -1.78
HMBOX1-206ENST00000519047 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 A0A0J9YXY3 114 aa3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 VPREB1P12018 145 aa3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 LBHQ53QV2 105 aaPredicted RBP3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 MEIG1Q5JSS6 88 aa3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 MRPL55Q7Z7F7 128 aaKnown RBP3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 MIR7-3HGQ8N6C7 128 aa3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 Q8NDZ9 215 aa3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
HMBOX1-206ENST00000519047 KRTAP19-1Q8IUB9 90 aa3.93□□□□□ -1.78
HMBOX1-206ENST00000519047 ATOH7Q8N100 152 aa3.93□□□□□ -1.78
HMBOX1-206ENST00000519047 LINC00167Q96N53 147 aa3.93□□□□□ -1.78
HMBOX1-206ENST00000519047 UBE2BP63146 152 aa3.93□□□□□ -1.78
HMBOX1-206ENST00000519047 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
HMBOX1-206ENST00000519047 C1orf137Q5JT78 98 aa3.93□□□□□ -1.78
HMBOX1-206ENST00000519047 ADAMTSL4-AS1Q5T5F5 129 aa3.93□□□□□ -1.78
HMBOX1-206ENST00000519047 NKAPP1Q8N9T2 125 aa3.93□□□□□ -1.78
HMBOX1-206ENST00000519047 LITAFQ99732 161 aa3.93□□□□□ -1.78
HMBOX1-206ENST00000519047 RPL37AP8A6NKH3 93 aa3.92□□□□□ -1.78
HMBOX1-206ENST00000519047 IGLV7-43P04211 117 aa3.92□□□□□ -1.78
HMBOX1-206ENST00000519047 SPINK6Q6UWN8 80 aa3.92□□□□□ -1.78
HMBOX1-206ENST00000519047 BOD1L2Q8IYS8 172 aa3.92□□□□□ -1.78
HMBOX1-206ENST00000519047 DAND5Q8N907 189 aa3.92□□□□□ -1.78
HMBOX1-206ENST00000519047 TTTY13Q9BZ97 58 aa3.92□□□□□ -1.78
HMBOX1-206ENST00000519047 IGLV1-50A0A075B6I6 118 aa3.91□□□□□ -1.78
HMBOX1-206ENST00000519047 GAGE10A6NGK3 116 aa3.91□□□□□ -1.78
HMBOX1-206ENST00000519047 ZNF815PA8K554 130 aa3.91□□□□□ -1.78
HMBOX1-206ENST00000519047 KRTAP29-1A8MX34 341 aaPredicted RBP3.91□□□□□ -1.78
HMBOX1-206ENST00000519047 TIMM17BO60830 172 aa3.91□□□□□ -1.78
HMBOX1-206ENST00000519047 OXTP01178 125 aa3.91□□□□□ -1.78
HMBOX1-206ENST00000519047 M0R378 163 aa3.9□□□□□ -1.78
HMBOX1-206ENST00000519047 SCGB1D1O95968 90 aa3.9□□□□□ -1.78
HMBOX1-206ENST00000519047 PCP4P48539 62 aa3.9□□□□□ -1.78
HMBOX1-206ENST00000519047 SOSTDC1Q6X4U4 206 aa3.9□□□□□ -1.78
HMBOX1-206ENST00000519047 PCP2Q8IVA1 136 aa3.9□□□□□ -1.78
HMBOX1-206ENST00000519047 IGKV2-28A0A075B6P5 120 aa3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 BCE1O60756 84 aa3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 NDUFC2O95298 119 aa3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 IGKV2D-28P01615 120 aa3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 TRBV10-2A0A0K0K1G8 114 aa3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 HSBP1L1C9JCN9 74 aa3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 ZNF861PO60384 105 aa3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 JOSD1Q15040 202 aaPredicted RBP3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 KRTAP13-1Q8IUC0 172 aa3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 LINC00308Q8TCZ7 52 aa3.89□□□□□ -1.79
HMBOX1-206ENST00000519047 DIRC1Q969H9 104 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms