RNA–Protein interactions for RNA: ENST00000518285.1

FAM49B-207, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-207ENST00000518285 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
FAM49B-207ENST00000518285 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
FAM49B-207ENST00000518285 ZNF815PA8K554 130 aa11.99□□□□□ -0.49
FAM49B-207ENST00000518285 RPL24P83731 157 aaKnown RBP11.99□□□□□ -0.49
FAM49B-207ENST00000518285 ANKRD39Q53RE8 183 aa11.99□□□□□ -0.49
FAM49B-207ENST00000518285 A0A0J9YXY3 114 aa11.98□□□□□ -0.49
FAM49B-207ENST00000518285 JOSD1Q15040 202 aaPredicted RBP11.98□□□□□ -0.49
FAM49B-207ENST00000518285 LBHQ53QV2 105 aaPredicted RBP11.98□□□□□ -0.49
FAM49B-207ENST00000518285 FAM19A5Q7Z5A7 132 aaPredicted RBP11.98□□□□□ -0.49
FAM49B-207ENST00000518285 TP73-AS1Q9UF72 201 aa11.98□□□□□ -0.49
FAM49B-207ENST00000518285 A0A0U1RRA0 63 aa11.97□□□□□ -0.49
FAM49B-207ENST00000518285 FAM168BA1KXE4 195 aa11.97□□□□□ -0.49
FAM49B-207ENST00000518285 KRTAP29-1A8MX34 341 aaPredicted RBP11.97□□□□□ -0.49
FAM49B-207ENST00000518285 TIMM17BO60830 172 aa11.97□□□□□ -0.49
FAM49B-207ENST00000518285 MIR7-3HGQ8N6C7 128 aa11.97□□□□□ -0.49
FAM49B-207ENST00000518285 IGLV5-37A0A075B6J1 123 aa11.95□□□□□ -0.5
FAM49B-207ENST00000518285 M0QXV9 152 aa11.95□□□□□ -0.5
FAM49B-207ENST00000518285 NKAPP1Q8N9T2 125 aa11.94□□□□□ -0.5
FAM49B-207ENST00000518285 C22orf24Q9Y442 160 aa11.94□□□□□ -0.5
FAM49B-207ENST00000518285 LOC107984156A0A0G2JMH3 177 aa11.93□□□□□ -0.5
FAM49B-207ENST00000518285 RPL37AP61513 92 aaKnown RBP11.93□□□□□ -0.5
FAM49B-207ENST00000518285 SERTAD4-AS1Q5TG53 156 aa11.93□□□□□ -0.5
FAM49B-207ENST00000518285 SCGB1D4Q6XE38 83 aa11.93□□□□□ -0.5
FAM49B-207ENST00000518285 ARL17AQ8IVW1 177 aa11.93□□□□□ -0.5
FAM49B-207ENST00000518285 PHF5AQ7RTV0 110 aaKnown RBP11.92□□□□□ -0.5
FAM49B-207ENST00000518285 KRTAP7-1Q8IUC3 87 aa11.92□□□□□ -0.5
FAM49B-207ENST00000518285 MIEN1Q9BRT3 115 aa11.92□□□□□ -0.5
FAM49B-207ENST00000518285 MRPL55Q7Z7F7 128 aaKnown RBP11.91□□□□□ -0.5
FAM49B-207ENST00000518285 COPS9Q8WXC6 57 aa11.91□□□□□ -0.5
FAM49B-207ENST00000518285 TMEM238C9JI98 176 aa11.9□□□□□ -0.5
FAM49B-207ENST00000518285 UBE2BP63146 152 aa11.9□□□□□ -0.5
FAM49B-207ENST00000518285 PCP2Q8IVA1 136 aa11.9□□□□□ -0.5
FAM49B-207ENST00000518285 TTTY13Q9BZ97 58 aa11.9□□□□□ -0.5
FAM49B-207ENST00000518285 VPREB1P12018 145 aa11.89□□□□□ -0.51
FAM49B-207ENST00000518285 Q6ZVH6 145 aa11.89□□□□□ -0.51
FAM49B-207ENST00000518285 BOD1L2Q8IYS8 172 aa11.89□□□□□ -0.51
FAM49B-207ENST00000518285 VAMP8Q9BV40 100 aa11.89□□□□□ -0.51
FAM49B-207ENST00000518285 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
FAM49B-207ENST00000518285 DAND5Q8N907 189 aa11.87□□□□□ -0.51
FAM49B-207ENST00000518285 LITAFQ99732 161 aa11.87□□□□□ -0.51
FAM49B-207ENST00000518285 M0R378 163 aa11.85□□□□□ -0.51
FAM49B-207ENST00000518285 NDUFC2O95298 119 aa11.85□□□□□ -0.51
FAM49B-207ENST00000518285 PRR3P79522 188 aaKnown RBP11.85□□□□□ -0.51
FAM49B-207ENST00000518285 LINC00167Q96N53 147 aa11.85□□□□□ -0.51
FAM49B-207ENST00000518285 SPANXDQ9BXN6 97 aa11.85□□□□□ -0.51
FAM49B-207ENST00000518285 SPANXCQ9NY87 97 aa11.85□□□□□ -0.51
FAM49B-207ENST00000518285 DLEU1O43261 78 aa11.84□□□□□ -0.51
FAM49B-207ENST00000518285 COX8AP10176 69 aa11.84□□□□□ -0.51
FAM49B-207ENST00000518285 IFITM1P13164 125 aa11.84□□□□□ -0.51
FAM49B-207ENST00000518285 KRTAP10-4P60372 401 aaPredicted RBP11.84□□□□□ -0.51
FAM49B-207ENST00000518285 SPATA45Q537H7 98 aa11.84□□□□□ -0.51
FAM49B-207ENST00000518285 PYY3Q5JQD4 70 aa11.84□□□□□ -0.51
FAM49B-207ENST00000518285 PPDPFQ9H3Y8 114 aa11.84□□□□□ -0.51
FAM49B-207ENST00000518285 PSORS1C2Q9UIG4 136 aa11.84□□□□□ -0.51
FAM49B-207ENST00000518285 LINC00308Q8TCZ7 52 aa11.83□□□□□ -0.52
FAM49B-207ENST00000518285 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
FAM49B-207ENST00000518285 TRBV10-2A0A0K0K1G8 114 aa11.82□□□□□ -0.52
FAM49B-207ENST00000518285 SPANXB1Q9NS25 103 aaPredicted RBP11.81□□□□□ -0.52
FAM49B-207ENST00000518285 LRP1Q07954 4544 aaKnown RBP11.8□□□□□ -0.52
FAM49B-207ENST00000518285 GAGE10A6NGK3 116 aa11.8□□□□□ -0.52
FAM49B-207ENST00000518285 C1orf137Q5JT78 98 aa11.8□□□□□ -0.52
FAM49B-207ENST00000518285 IGLV1-50A0A075B6I6 118 aa11.79□□□□□ -0.52
FAM49B-207ENST00000518285 OXTP01178 125 aa11.79□□□□□ -0.52
FAM49B-207ENST00000518285 S100A12P80511 92 aa11.79□□□□□ -0.52
FAM49B-207ENST00000518285 Q8NDZ9 215 aa11.79□□□□□ -0.52
FAM49B-207ENST00000518285 RPL37AP8A6NKH3 93 aa11.78□□□□□ -0.52
FAM49B-207ENST00000518285 NPC2P61916 151 aa11.78□□□□□ -0.52
FAM49B-207ENST00000518285 SRSF9Q13242 221 aaKnown RBP eCLIP11.78□□□□□ -0.52
FAM49B-207ENST00000518285 SOSTDC1Q6X4U4 206 aa11.78□□□□□ -0.52
FAM49B-207ENST00000518285 LINC00518Q8N0U6 118 aa11.78□□□□□ -0.52
FAM49B-207ENST00000518285 CBY1Q9Y3M2 126 aa11.78□□□□□ -0.52
FAM49B-207ENST00000518285 SLC25A34Q6PIV7 304 aa11.77□□□□□ -0.53
FAM49B-207ENST00000518285 NCR3O14931 201 aa11.76□□□□□ -0.53
FAM49B-207ENST00000518285 KRTAP11-1Q8IUC1 163 aa11.76□□□□□ -0.53
FAM49B-207ENST00000518285 C14orf144Q96I85 54 aa11.76□□□□□ -0.53
FAM49B-207ENST00000518285 IGKV2-28A0A075B6P5 120 aa11.75□□□□□ -0.53
FAM49B-207ENST00000518285 IGKV2D-28P01615 120 aa11.75□□□□□ -0.53
FAM49B-207ENST00000518285 IGLV7-43P04211 117 aa11.75□□□□□ -0.53
FAM49B-207ENST00000518285 BCE1O60756 84 aa11.74□□□□□ -0.53
FAM49B-207ENST00000518285 S100A7L2Q5SY68 101 aa11.74□□□□□ -0.53
FAM49B-207ENST00000518285 SPINK6Q6UWN8 80 aa11.74□□□□□ -0.53
FAM49B-207ENST00000518285 HMCN2Q8NDA2 5059 aa11.74□□□□□ -0.53
FAM49B-207ENST00000518285 EIF4EBP3O60516 100 aaPredicted RBP11.73□□□□□ -0.53
FAM49B-207ENST00000518285 REG3GQ6UW15 175 aa11.73□□□□□ -0.53
FAM49B-207ENST00000518285 MUSTN1Q8IVN3 82 aa11.73□□□□□ -0.53
FAM49B-207ENST00000518285 HIGD1BQ9P298 99 aa11.73□□□□□ -0.53
FAM49B-207ENST00000518285 PRYO14603 147 aa11.72□□□□□ -0.53
FAM49B-207ENST00000518285 DDTP30046 118 aa11.72□□□□□ -0.53
FAM49B-207ENST00000518285 HNRNPA3P51991 378 aaKnown RBP11.72□□□□□ -0.53
FAM49B-207ENST00000518285 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
FAM49B-207ENST00000518285 TRBV10-3A0A0K0K1G6 114 aa11.7□□□□□ -0.54
FAM49B-207ENST00000518285 IGLV6-57P01721 117 aa11.7□□□□□ -0.54
FAM49B-207ENST00000518285 RPL28P46779 137 aaKnown RBP11.7□□□□□ -0.54
FAM49B-207ENST00000518285 HIST1H4GQ99525 98 aa11.7□□□□□ -0.54
FAM49B-207ENST00000518285 TMEM126AQ9H061 195 aa11.7□□□□□ -0.54
FAM49B-207ENST00000518285 UBR4Q5T4S7 5183 aa11.69□□□□□ -0.54
FAM49B-207ENST00000518285 ZNF861PO60384 105 aa11.69□□□□□ -0.54
FAM49B-207ENST00000518285 SMIM6P0DI80 62 aa11.69□□□□□ -0.54
FAM49B-207ENST00000518285 DIRC1Q969H9 104 aa11.69□□□□□ -0.54
FAM49B-207ENST00000518285 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 197.5 ms