RNA–Protein interactions for RNA: ENST00000516965.1

SNORA48.10-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 160 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.10-201ENST00000516965 PKD1L3Q7Z443 1732 aa0.8□□□□□ -2.28
SNORA48.10-201ENST00000516965 RGPD8O14715 1765 aaPredicted RBP0.8□□□□□ -2.28
SNORA48.10-201ENST00000516965 LTN1O94822 1766 aa0.8□□□□□ -2.28
SNORA48.10-201ENST00000516965 RGPD5Q99666 1765 aa0.8□□□□□ -2.28
SNORA48.10-201ENST00000516965 SCN11AQ9UI33 1791 aa0.8□□□□□ -2.28
SNORA48.10-201ENST00000516965 CACNA1EQ15878 2313 aa0.8□□□□□ -2.28
SNORA48.10-201ENST00000516965 F8P00451 2351 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 SLIT1O75093 1534 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 ERICH3Q5RHP9 1530 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 SPTY2D1-AS1A0A0U1RR47 76 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 KRTAP19-3Q7Z4W3 81 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 Q8IZM0 81 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 GNG13Q9P2W3 67 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 PIEZO1Q92508 2521 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 ZNF292O60281 2723 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 TULP4Q9NRJ4 1543 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 MEGF8Q7Z7M0 2845 aa0.79□□□□□ -2.28
SNORA48.10-201ENST00000516965 ZC3H13Q5T200 1668 aaKnown RBP0.78□□□□□ -2.28
SNORA48.10-201ENST00000516965 C2CD3Q4AC94 2353 aa0.78□□□□□ -2.28
SNORA48.10-201ENST00000516965 RGPD1P0DJD0 1748 aa0.78□□□□□ -2.28
SNORA48.10-201ENST00000516965 RGPD2P0DJD1 1756 aa0.78□□□□□ -2.28
SNORA48.10-201ENST00000516965 NREPQ16612 68 aa0.78□□□□□ -2.28
SNORA48.10-201ENST00000516965 TTC28Q96AY4 2481 aa0.78□□□□□ -2.28
SNORA48.10-201ENST00000516965 BDP1A6H8Y1 2624 aa0.78□□□□□ -2.29
SNORA48.10-201ENST00000516965 CEP170BQ9Y4F5 1589 aaPredicted RBP0.78□□□□□ -2.29
SNORA48.10-201ENST00000516965 PAPPAQ13219 1627 aa0.78□□□□□ -2.29
SNORA48.10-201ENST00000516965 I3L3M4 83 aa0.77□□□□□ -2.29
SNORA48.10-201ENST00000516965 RPL38P63173 70 aaKnown RBP0.77□□□□□ -2.29
SNORA48.10-201ENST00000516965 USMG5Q96IX5 58 aa0.77□□□□□ -2.29
SNORA48.10-201ENST00000516965 ZNF831Q5JPB2 1677 aa0.77□□□□□ -2.29
SNORA48.10-201ENST00000516965 NOTCH1P46531 2555 aa0.76□□□□□ -2.29
SNORA48.10-201ENST00000516965 UBR3Q6ZT12 1888 aa0.76□□□□□ -2.29
SNORA48.10-201ENST00000516965 USP32Q8NFA0 1604 aa0.76□□□□□ -2.29
SNORA48.10-201ENST00000516965 MADDQ8WXG6 1647 aa0.76□□□□□ -2.29
SNORA48.10-201ENST00000516965 K7EQZ3 153 aa0.76□□□□□ -2.29
SNORA48.10-201ENST00000516965 COX8AP10176 69 aa0.76□□□□□ -2.29
SNORA48.10-201ENST00000516965 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
SNORA48.10-201ENST00000516965 MROH1Q8NDA8 1641 aa0.75□□□□□ -2.29
SNORA48.10-201ENST00000516965 DEFB123Q8N688 67 aa0.75□□□□□ -2.29
SNORA48.10-201ENST00000516965 S100ZQ8WXG8 99 aa0.75□□□□□ -2.29
SNORA48.10-201ENST00000516965 ABCA12Q86UK0 2595 aa0.75□□□□□ -2.29
SNORA48.10-201ENST00000516965 ARFGEF2Q9Y6D5 1785 aa0.75□□□□□ -2.29
SNORA48.10-201ENST00000516965 LRRC37AA6NMS7 1700 aa0.75□□□□□ -2.29
SNORA48.10-201ENST00000516965 SPTBN1Q01082 2364 aaKnown RBP0.75□□□□□ -2.29
SNORA48.10-201ENST00000516965 CHD9Q3L8U1 2897 aa0.75□□□□□ -2.29
SNORA48.10-201ENST00000516965 USF3Q68DE3 2245 aa0.74□□□□□ -2.29
SNORA48.10-201ENST00000516965 ANK2Q01484 3957 aa0.74□□□□□ -2.29
SNORA48.10-201ENST00000516965 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.74□□□□□ -2.29
SNORA48.10-201ENST00000516965 CPSF4LA6NMK7 179 aaKnown RBP0.74□□□□□ -2.29
SNORA48.10-201ENST00000516965 HMGA1P17096 107 aaKnown RBP0.74□□□□□ -2.29
SNORA48.10-201ENST00000516965 ATXN8Q156A1 80 aa0.74□□□□□ -2.29
SNORA48.10-201ENST00000516965 MAGI3Q5TCQ9 1506 aa0.74□□□□□ -2.29
SNORA48.10-201ENST00000516965 ASXL1Q8IXJ9 1541 aa0.74□□□□□ -2.29
SNORA48.10-201ENST00000516965 FBN2P35556 2912 aa0.73□□□□□ -2.29
SNORA48.10-201ENST00000516965 GVINP1Q7Z2Y8 2422 aa0.73□□□□□ -2.29
SNORA48.10-201ENST00000516965 NDUFA4O00483 81 aa0.73□□□□□ -2.29
SNORA48.10-201ENST00000516965 COX6B1P14854 86 aa0.73□□□□□ -2.29
SNORA48.10-201ENST00000516965 FXYD6Q9H0Q3 95 aa0.73□□□□□ -2.29
SNORA48.10-201ENST00000516965 EFCAB5A4FU69 1503 aa0.73□□□□□ -2.29
SNORA48.10-201ENST00000516965 LMTK2Q8IWU2 1503 aa0.73□□□□□ -2.29
SNORA48.10-201ENST00000516965 CD163L1Q9NR16 1453 aa0.73□□□□□ -2.29
SNORA48.10-201ENST00000516965 CDC42BPGQ6DT37 1551 aa0.72□□□□□ -2.29
SNORA48.10-201ENST00000516965 A0A087WWC5 75 aa0.72□□□□□ -2.29
SNORA48.10-201ENST00000516965 MRPL34Q9BQ48 92 aaKnown RBP0.72□□□□□ -2.29
SNORA48.10-201ENST00000516965 PTPRQQ9UMZ3 2332 aa0.72□□□□□ -2.29
SNORA48.10-201ENST00000516965 APCP25054 2843 aa0.72□□□□□ -2.29
SNORA48.10-201ENST00000516965 POLR1AO95602 1720 aaPredicted RBP0.72□□□□□ -2.29
SNORA48.10-201ENST00000516965 FMN2Q9NZ56 1722 aa0.72□□□□□ -2.29
SNORA48.10-201ENST00000516965 HFM1A2PYH4 1435 aa0.72□□□□□ -2.29
SNORA48.10-201ENST00000516965 PTPRZ1P23471 2315 aaPredicted RBP0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 DIP2AQ14689 1571 aa0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 INO80Q9ULG1 1556 aaPredicted RBP0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 COL14A1Q05707 1796 aaKnown RBP0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 ENHOQ6UWT2 76 aa0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 APLNQ9ULZ1 77 aa0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 TIAM2Q8IVF5 1701 aa0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 DOT1LQ8TEK3 1739 aa0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 ABCA9Q8IUA7 1624 aa0.71□□□□□ -2.3
SNORA48.10-201ENST00000516965 LCE6AA0A183 80 aa0.7□□□□□ -2.3
SNORA48.10-201ENST00000516965 SFTA3P0C7M3 94 aa0.7□□□□□ -2.3
SNORA48.10-201ENST00000516965 C3orf79P0CE67 100 aa0.7□□□□□ -2.3
SNORA48.10-201ENST00000516965 SPRR1BP22528 89 aa0.7□□□□□ -2.3
SNORA48.10-201ENST00000516965 CNOT1A5YKK6 2376 aaKnown RBP0.7□□□□□ -2.3
SNORA48.10-201ENST00000516965 ANKRD50Q9ULJ7 1429 aa0.7□□□□□ -2.3
SNORA48.10-201ENST00000516965 ITSN1Q15811 1721 aa0.69□□□□□ -2.3
SNORA48.10-201ENST00000516965 QSER1Q2KHR3 1735 aa0.69□□□□□ -2.3
SNORA48.10-201ENST00000516965 RICTORQ6R327 1708 aa0.69□□□□□ -2.3
SNORA48.10-201ENST00000516965 CFAP43Q8NDM7 1665 aa0.69□□□□□ -2.3
SNORA48.10-201ENST00000516965 BIVM-ERCC5R4GMW8 1640 aa0.69□□□□□ -2.3
SNORA48.10-201ENST00000516965 SPRR1AP35321 89 aa0.69□□□□□ -2.3
SNORA48.10-201ENST00000516965 AKAP6Q13023 2319 aa0.69□□□□□ -2.3
SNORA48.10-201ENST00000516965 ZNF469Q96JG9 3925 aaPredicted RBP0.69□□□□□ -2.3
SNORA48.10-201ENST00000516965 CCL22O00626 93 aa0.68□□□□□ -2.3
SNORA48.10-201ENST00000516965 KLK9Q2XQG4 91 aa0.68□□□□□ -2.3
SNORA48.10-201ENST00000516965 Q5VSD8 79 aa0.68□□□□□ -2.3
SNORA48.10-201ENST00000516965 DEFB105AQ8NG35 78 aa0.68□□□□□ -2.3
SNORA48.10-201ENST00000516965 TPRP12270 2363 aaKnown RBP0.68□□□□□ -2.3
SNORA48.10-201ENST00000516965 TNCP24821 2201 aa0.68□□□□□ -2.3
SNORA48.10-201ENST00000516965 LINC01549A6NIU2 74 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms