RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 TRBV30A0A0K0K1B3 111 aa4.14□□□□□ -1.75
SCARNA11.1-201ENST00000516918 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
SCARNA11.1-201ENST00000516918 SPINK8P0C7L1 97 aa4.14□□□□□ -1.75
SCARNA11.1-201ENST00000516918 C20orf202A1L168 122 aa4.13□□□□□ -1.75
SCARNA11.1-201ENST00000516918 C11orf86A6NJI1 115 aa4.13□□□□□ -1.75
SCARNA11.1-201ENST00000516918 IGKCP01834 107 aa4.13□□□□□ -1.75
SCARNA11.1-201ENST00000516918 TLX1NBP0CAT3 122 aa4.13□□□□□ -1.75
SCARNA11.1-201ENST00000516918 HERVK_113P61574 105 aa4.13□□□□□ -1.75
SCARNA11.1-201ENST00000516918 SNRPEP62304 92 aaKnown RBP4.13□□□□□ -1.75
SCARNA11.1-201ENST00000516918 IGLV5-39A0A0G2JS06 123 aa4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 TMEM223A0PJW6 202 aa4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 SMIM1B2RUZ4 78 aa4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 NDUFC2-KCTD14E9PQ53 114 aa4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 ZNF861PO60384 105 aa4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 ZNF22P17026 224 aaPredicted RBP4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 KRTDAPP60985 99 aa4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 COX17Q14061 63 aa4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 C9orf129Q5T035 196 aaKnown RBP4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 C2orf82Q6UX34 121 aa4.12□□□□□ -1.75
SCARNA11.1-201ENST00000516918 MYMXA0A1B0GTQ4 84 aa4.11□□□□□ -1.75
SCARNA11.1-201ENST00000516918 C5orf52A6NGY3 159 aa4.11□□□□□ -1.75
SCARNA11.1-201ENST00000516918 C3orf79P0CE67 100 aa4.11□□□□□ -1.75
SCARNA11.1-201ENST00000516918 LINC01545Q5VT33 79 aa4.11□□□□□ -1.75
SCARNA11.1-201ENST00000516918 PLEKHB2Q96CS7 222 aa4.11□□□□□ -1.75
SCARNA11.1-201ENST00000516918 RETNLBQ9BQ08 111 aa4.11□□□□□ -1.75
SCARNA11.1-201ENST00000516918 A0A087X002 238 aa4.1□□□□□ -1.75
SCARNA11.1-201ENST00000516918 LEPROTO15243 131 aa4.1□□□□□ -1.75
SCARNA11.1-201ENST00000516918 HERV-K104P63124 156 aa4.1□□□□□ -1.75
SCARNA11.1-201ENST00000516918 HIST3H2BBQ8N257 126 aa4.1□□□□□ -1.75
SCARNA11.1-201ENST00000516918 TYMSOSQ8TAI1 123 aa4.1□□□□□ -1.75
SCARNA11.1-201ENST00000516918 HIST1H2BLQ99880 126 aa4.1□□□□□ -1.75
SCARNA11.1-201ENST00000516918 PMCHL2Q9BQD1 86 aa4.1□□□□□ -1.75
SCARNA11.1-201ENST00000516918 ANAPC11Q9NYG5 84 aa4.1□□□□□ -1.75
SCARNA11.1-201ENST00000516918 HSBP1L1C9JCN9 74 aa4.09□□□□□ -1.75
SCARNA11.1-201ENST00000516918 J3QQQ9 107 aa4.09□□□□□ -1.75
SCARNA11.1-201ENST00000516918 SCGB1D1O95968 90 aa4.09□□□□□ -1.75
SCARNA11.1-201ENST00000516918 CRYGAP11844 174 aa4.09□□□□□ -1.75
SCARNA11.1-201ENST00000516918 LGALS3P17931 250 aaKnown RBP4.09□□□□□ -1.75
SCARNA11.1-201ENST00000516918 NMUP48645 174 aa4.09□□□□□ -1.75
SCARNA11.1-201ENST00000516918 LINC00158P58513 81 aa4.09□□□□□ -1.75
SCARNA11.1-201ENST00000516918 C22orf24Q9Y442 160 aa4.09□□□□□ -1.75
SCARNA11.1-201ENST00000516918 PFN2P35080 140 aa4.08□□□□□ -1.76
SCARNA11.1-201ENST00000516918 LBHQ53QV2 105 aaPredicted RBP4.08□□□□□ -1.76
SCARNA11.1-201ENST00000516918 CDIP1Q9H305 208 aa4.08□□□□□ -1.76
SCARNA11.1-201ENST00000516918 XAGE1AQ9HD64 81 aa4.08□□□□□ -1.76
SCARNA11.1-201ENST00000516918 NDUFA12Q9UI09 145 aa4.08□□□□□ -1.76
SCARNA11.1-201ENST00000516918 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
SCARNA11.1-201ENST00000516918 E9PLD3 99 aa4.07□□□□□ -1.76
SCARNA11.1-201ENST00000516918 RPL28P46779 137 aaKnown RBP4.07□□□□□ -1.76
SCARNA11.1-201ENST00000516918 RPL24P83731 157 aaKnown RBP4.07□□□□□ -1.76
SCARNA11.1-201ENST00000516918 ZNF625Q96I27 306 aaPredicted RBP4.07□□□□□ -1.76
SCARNA11.1-201ENST00000516918 ERG28Q9UKR5 140 aa4.07□□□□□ -1.76
SCARNA11.1-201ENST00000516918 BCE1O60756 84 aa4.06□□□□□ -1.76
SCARNA11.1-201ENST00000516918 KRTAP13-2Q52LG2 175 aa4.06□□□□□ -1.76
SCARNA11.1-201ENST00000516918 MEIG1Q5JSS6 88 aa4.06□□□□□ -1.76
SCARNA11.1-201ENST00000516918 IGLV7-46A0A075B6I9 117 aa4.05□□□□□ -1.76
SCARNA11.1-201ENST00000516918 RPL37AP8A6NKH3 93 aa4.05□□□□□ -1.76
SCARNA11.1-201ENST00000516918 MRPL55Q7Z7F7 128 aaKnown RBP4.05□□□□□ -1.76
SCARNA11.1-201ENST00000516918 LINC00304Q8N9R0 145 aa4.05□□□□□ -1.76
SCARNA11.1-201ENST00000516918 GAGE10A6NGK3 116 aa4.04□□□□□ -1.76
SCARNA11.1-201ENST00000516918 SMIM13P0DJ93 91 aa4.04□□□□□ -1.76
SCARNA11.1-201ENST00000516918 COPS9Q8WXC6 57 aa4.04□□□□□ -1.76
SCARNA11.1-201ENST00000516918 LINC00167Q96N53 147 aa4.04□□□□□ -1.76
SCARNA11.1-201ENST00000516918 SND1-IT1Q9HBX3 110 aa4.04□□□□□ -1.76
SCARNA11.1-201ENST00000516918 A0A0J9YXY3 114 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 A0A0U1RRA0 63 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 ZNF815PA8K554 130 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 UBE2AP49459 152 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 SCGB1D4Q6XE38 83 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 MIR7-3HGQ8N6C7 128 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 NKAPP1Q8N9T2 125 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 MIEN1Q9BRT3 115 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 TP73-AS1Q9UF72 201 aa4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 TMA7Q9Y2S6 64 aaKnown RBP4.03□□□□□ -1.76
SCARNA11.1-201ENST00000516918 LOC107984156A0A0G2JMH3 177 aa4.02□□□□□ -1.77
SCARNA11.1-201ENST00000516918 TIMM17BO60830 172 aa4.02□□□□□ -1.77
SCARNA11.1-201ENST00000516918 S100A12P80511 92 aa4.02□□□□□ -1.77
SCARNA11.1-201ENST00000516918 JOSD1Q15040 202 aaPredicted RBP4.02□□□□□ -1.77
SCARNA11.1-201ENST00000516918 Q6ZVH6 145 aa4.02□□□□□ -1.77
SCARNA11.1-201ENST00000516918 ARL17AQ8IVW1 177 aa4.02□□□□□ -1.77
SCARNA11.1-201ENST00000516918 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
SCARNA11.1-201ENST00000516918 PPDPFQ9H3Y8 114 aa4.02□□□□□ -1.77
SCARNA11.1-201ENST00000516918 IGKV2D-26A0A0A0MRZ7 120 aa4.01□□□□□ -1.77
SCARNA11.1-201ENST00000516918 M0R378 163 aa4.01□□□□□ -1.77
SCARNA11.1-201ENST00000516918 TSPEAR-AS2P59090 65 aa4.01□□□□□ -1.77
SCARNA11.1-201ENST00000516918 KRTAP13-1Q8IUC0 172 aa4.01□□□□□ -1.77
SCARNA11.1-201ENST00000516918 LINC00518Q8N0U6 118 aa4.01□□□□□ -1.77
SCARNA11.1-201ENST00000516918 IGLV5-37A0A075B6J1 123 aa4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 TMEM238C9JI98 176 aa4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 IFITM1P13164 125 aa4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 FAM229BQ4G0N7 80 aa4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 ANKRD39Q53RE8 183 aa4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 ADAMTSL4-AS1Q5T5F5 129 aa4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 LCE2DQ5TA82 110 aaPredicted RBP4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 CRCT1Q9UGL9 99 aa4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 CBY1Q9Y3M2 126 aa4□□□□□ -1.77
SCARNA11.1-201ENST00000516918 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms