RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 Q75L30 129 aa6.38□□□□□ -1.39
SMAD1-216ENST00000515527 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
SMAD1-216ENST00000515527 CBY1Q9Y3M2 126 aa6.38□□□□□ -1.39
SMAD1-216ENST00000515527 H7C2G1 150 aa6.37□□□□□ -1.39
SMAD1-216ENST00000515527 C20orf78Q9BR46 151 aa6.37□□□□□ -1.39
SMAD1-216ENST00000515527 SPRR1AP35321 89 aa6.36□□□□□ -1.39
SMAD1-216ENST00000515527 HERVK_113P63121 156 aa6.36□□□□□ -1.39
SMAD1-216ENST00000515527 C10orf91Q5T1B1 145 aa6.36□□□□□ -1.39
SMAD1-216ENST00000515527 A0A1B0GUT8 65 aa6.35□□□□□ -1.39
SMAD1-216ENST00000515527 ATP5LO75964 103 aa6.35□□□□□ -1.39
SMAD1-216ENST00000515527 SPRR2DP22532 72 aa6.35□□□□□ -1.39
SMAD1-216ENST00000515527 SMIM2Q9BVW6 85 aa6.35□□□□□ -1.39
SMAD1-216ENST00000515527 VCX2Q9H322 139 aa6.35□□□□□ -1.39
SMAD1-216ENST00000515527 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.39
SMAD1-216ENST00000515527 RAB5AP20339 215 aa6.34□□□□□ -1.39
SMAD1-216ENST00000515527 TRAV9-1A0A075B6T8 112 aa6.33□□□□□ -1.4
SMAD1-216ENST00000515527 SEC11AP67812 179 aa6.33□□□□□ -1.4
SMAD1-216ENST00000515527 FAM213BQ8TBF2 198 aa6.33□□□□□ -1.4
SMAD1-216ENST00000515527 GATCO43716 136 aaKnown RBP6.32□□□□□ -1.4
SMAD1-216ENST00000515527 PDZD11Q5EBL8 140 aa6.32□□□□□ -1.4
SMAD1-216ENST00000515527 C2orf66Q6UXQ4 117 aa6.32□□□□□ -1.4
SMAD1-216ENST00000515527 MBD3L1Q8WWY6 194 aa6.32□□□□□ -1.4
SMAD1-216ENST00000515527 AMELXQ99217 191 aa6.32□□□□□ -1.4
SMAD1-216ENST00000515527 B5MCH6 92 aa6.31□□□□□ -1.4
SMAD1-216ENST00000515527 SMIM29Q86T20 159 aa6.31□□□□□ -1.4
SMAD1-216ENST00000515527 KCNQ1DNQ9H478 68 aa6.31□□□□□ -1.4
SMAD1-216ENST00000515527 RBM12B-AS1Q9P1G2 102 aa6.31□□□□□ -1.4
SMAD1-216ENST00000515527 GNG13Q9P2W3 67 aa6.31□□□□□ -1.4
SMAD1-216ENST00000515527 TRBV24-1A0A075B6N3 115 aa6.3□□□□□ -1.4
SMAD1-216ENST00000515527 K7EN84 100 aa6.3□□□□□ -1.4
SMAD1-216ENST00000515527 MRPL51Q4U2R6 128 aaKnown RBP6.3□□□□□ -1.4
SMAD1-216ENST00000515527 Q9BRP9 147 aa6.3□□□□□ -1.4
SMAD1-216ENST00000515527 A0A0G2JQZ4 141 aa6.29□□□□□ -1.4
SMAD1-216ENST00000515527 A8MWP4 228 aa6.29□□□□□ -1.4
SMAD1-216ENST00000515527 Q1RN00 199 aa6.29□□□□□ -1.4
SMAD1-216ENST00000515527 RGS21Q2M5E4 152 aa6.29□□□□□ -1.4
SMAD1-216ENST00000515527 OBSCN-AS1Q96MR7 158 aa6.29□□□□□ -1.4
SMAD1-216ENST00000515527 MANBALQ9NQG1 85 aa6.29□□□□□ -1.4
SMAD1-216ENST00000515527 HIGD1CA8MV81 97 aa6.28□□□□□ -1.4
SMAD1-216ENST00000515527 SNAPINO95295 136 aa6.28□□□□□ -1.4
SMAD1-216ENST00000515527 CKS2P33552 79 aa6.28□□□□□ -1.4
SMAD1-216ENST00000515527 CD164Q04900 197 aa6.28□□□□□ -1.4
SMAD1-216ENST00000515527 ERG28Q9UKR5 140 aa6.28□□□□□ -1.4
SMAD1-216ENST00000515527 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
SMAD1-216ENST00000515527 LOC389332A0A1B0GUA5 103 aa6.27□□□□□ -1.41
SMAD1-216ENST00000515527 LINC00862A6NCI5 91 aa6.27□□□□□ -1.41
SMAD1-216ENST00000515527 Q5XG85 94 aa6.27□□□□□ -1.41
SMAD1-216ENST00000515527 OCC1Q8TAD7 63 aa6.27□□□□□ -1.41
SMAD1-216ENST00000515527 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
SMAD1-216ENST00000515527 LOC107984156A0A0G2JMH3 177 aa6.26□□□□□ -1.41
SMAD1-216ENST00000515527 H2AFB1P0C5Y9 115 aa6.26□□□□□ -1.41
SMAD1-216ENST00000515527 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
SMAD1-216ENST00000515527 PCP2Q8IVA1 136 aa6.26□□□□□ -1.41
SMAD1-216ENST00000515527 ARL17AQ8IVW1 177 aa6.26□□□□□ -1.41
SMAD1-216ENST00000515527 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
SMAD1-216ENST00000515527 LINC00518Q8N0U6 118 aa6.25□□□□□ -1.41
SMAD1-216ENST00000515527 MRPL18Q9H0U6 180 aaKnown RBP6.25□□□□□ -1.41
SMAD1-216ENST00000515527 NCR3O14931 201 aa6.24□□□□□ -1.41
SMAD1-216ENST00000515527 PDE6DO43924 150 aa6.24□□□□□ -1.41
SMAD1-216ENST00000515527 SPINK8P0C7L1 97 aa6.24□□□□□ -1.41
SMAD1-216ENST00000515527 RIGQ13278 110 aa6.24□□□□□ -1.41
SMAD1-216ENST00000515527 FAM104BQ5XKR9 115 aa6.24□□□□□ -1.41
SMAD1-216ENST00000515527 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
SMAD1-216ENST00000515527 COX17Q14061 63 aa6.23□□□□□ -1.41
SMAD1-216ENST00000515527 NPYP01303 97 aa6.22□□□□□ -1.41
SMAD1-216ENST00000515527 CT83Q5H943 113 aa6.22□□□□□ -1.41
SMAD1-216ENST00000515527 Q6ZRX8 168 aa6.22□□□□□ -1.41
SMAD1-216ENST00000515527 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
SMAD1-216ENST00000515527 CYSLTR1Q9Y271 337 aa6.22□□□□□ -1.41
SMAD1-216ENST00000515527 TRBV10-3A0A0K0K1G6 114 aa6.21□□□□□ -1.42
SMAD1-216ENST00000515527 PCP4P48539 62 aa6.21□□□□□ -1.42
SMAD1-216ENST00000515527 KRTAP10-5P60370 271 aa6.21□□□□□ -1.42
SMAD1-216ENST00000515527 PCP4L1A6NKN8 68 aa6.2□□□□□ -1.42
SMAD1-216ENST00000515527 D6R8Y8 96 aa6.2□□□□□ -1.42
SMAD1-216ENST00000515527 EIF4EBP3O60516 100 aaPredicted RBP6.2□□□□□ -1.42
SMAD1-216ENST00000515527 SLC25A34Q6PIV7 304 aa6.2□□□□□ -1.42
SMAD1-216ENST00000515527 ALKAL2Q6UX46 152 aa6.2□□□□□ -1.42
SMAD1-216ENST00000515527 UMAD1C9J7I0 102 aa6.19□□□□□ -1.42
SMAD1-216ENST00000515527 Q5BKY6 102 aa6.19□□□□□ -1.42
SMAD1-216ENST00000515527 MPLKIPQ8TAP9 179 aa6.19□□□□□ -1.42
SMAD1-216ENST00000515527 HSBP1L1C9JCN9 74 aa6.18□□□□□ -1.42
SMAD1-216ENST00000515527 PRO1933Q9H354 126 aa6.18□□□□□ -1.42
SMAD1-216ENST00000515527 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
SMAD1-216ENST00000515527 PAPPA-AS1Q5QFB9 102 aa6.17□□□□□ -1.42
SMAD1-216ENST00000515527 Q96NJ1 140 aa6.17□□□□□ -1.42
SMAD1-216ENST00000515527 IGIPA6NJ69 53 aa6.16□□□□□ -1.42
SMAD1-216ENST00000515527 JOSD1Q15040 202 aaPredicted RBP6.16□□□□□ -1.42
SMAD1-216ENST00000515527 BOD1L2Q8IYS8 172 aa6.16□□□□□ -1.42
SMAD1-216ENST00000515527 TINCRA0A1B0GVN0 87 aa6.15□□□□□ -1.42
SMAD1-216ENST00000515527 HRES1P13985 223 aa6.15□□□□□ -1.42
SMAD1-216ENST00000515527 LINC00158P58513 81 aa6.15□□□□□ -1.42
SMAD1-216ENST00000515527 DSTQ03001 7570 aaKnown RBP6.14□□□□□ -1.43
SMAD1-216ENST00000515527 IGLV5-45A0A087WSX0 123 aa6.14□□□□□ -1.43
SMAD1-216ENST00000515527 F8W036 122 aa6.14□□□□□ -1.43
SMAD1-216ENST00000515527 TCL1BO95988 128 aa6.14□□□□□ -1.43
SMAD1-216ENST00000515527 LINC00299Q6ZSB3 139 aa6.14□□□□□ -1.43
SMAD1-216ENST00000515527 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
SMAD1-216ENST00000515527 A0A0U1RRA0 63 aa6.12□□□□□ -1.43
SMAD1-216ENST00000515527 HMSDA8MTL9 139 aa6.12□□□□□ -1.43
SMAD1-216ENST00000515527 C5orf52A6NGY3 159 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms