RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 M0R378 163 aa8.62□□□□□ -1.03
DDR1-278ENST00000515233 GNB1LQ9BYB4 327 aa8.62□□□□□ -1.03
DDR1-278ENST00000515233 SND1-IT1Q9HBX3 110 aa8.62□□□□□ -1.03
DDR1-278ENST00000515233 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
DDR1-278ENST00000515233 IGLC3P0DOY3 106 aa8.61□□□□□ -1.03
DDR1-278ENST00000515233 SPAG11AQ6PDA7 123 aa8.61□□□□□ -1.03
DDR1-278ENST00000515233 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
DDR1-278ENST00000515233 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
DDR1-278ENST00000515233 S100A6P06703 90 aa8.6□□□□□ -1.03
DDR1-278ENST00000515233 C3orf22Q8N5N4 141 aa8.6□□□□□ -1.03
DDR1-278ENST00000515233 ZNF22P17026 224 aaPredicted RBP8.58□□□□□ -1.04
DDR1-278ENST00000515233 COX19Q49B96 90 aa8.58□□□□□ -1.04
DDR1-278ENST00000515233 FA2HQ7L5A8 372 aa8.58□□□□□ -1.04
DDR1-278ENST00000515233 Q8NDZ9 215 aa8.58□□□□□ -1.04
DDR1-278ENST00000515233 YPEL4Q96NS1 127 aa8.58□□□□□ -1.04
DDR1-278ENST00000515233 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
DDR1-278ENST00000515233 FP248Q71RG6 208 aaPredicted RBP8.56□□□□□ -1.04
DDR1-278ENST00000515233 ZNF625Q96I27 306 aaPredicted RBP8.56□□□□□ -1.04
DDR1-278ENST00000515233 HIGD2AQ9BW72 106 aa8.56□□□□□ -1.04
DDR1-278ENST00000515233 A0A096LNJ9 63 aa8.55□□□□□ -1.04
DDR1-278ENST00000515233 SPRR4Q96PI1 79 aa8.55□□□□□ -1.04
DDR1-278ENST00000515233 NDUFA6P56556 154 aa8.54□□□□□ -1.04
DDR1-278ENST00000515233 FABP9Q0Z7S8 132 aa8.53□□□□□ -1.04
DDR1-278ENST00000515233 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
DDR1-278ENST00000515233 C5orf52A6NGY3 159 aa8.52□□□□□ -1.05
DDR1-278ENST00000515233 ZNF706Q9Y5V0 76 aaPredicted RBP8.52□□□□□ -1.05
DDR1-278ENST00000515233 LINC00614P0C842 121 aa8.51□□□□□ -1.05
DDR1-278ENST00000515233 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
DDR1-278ENST00000515233 LINC00337Q8N6G1 96 aa8.51□□□□□ -1.05
DDR1-278ENST00000515233 URB1-AS1Q96HZ7 61 aa8.51□□□□□ -1.05
DDR1-278ENST00000515233 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
DDR1-278ENST00000515233 LINC00158P58513 81 aa8.5□□□□□ -1.05
DDR1-278ENST00000515233 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
DDR1-278ENST00000515233 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
DDR1-278ENST00000515233 HBDP02042 147 aa8.49□□□□□ -1.05
DDR1-278ENST00000515233 SNRPEP62304 92 aaKnown RBP8.49□□□□□ -1.05
DDR1-278ENST00000515233 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
DDR1-278ENST00000515233 SPINK1P00995 79 aa8.48□□□□□ -1.05
DDR1-278ENST00000515233 TRGC2P03986 189 aa8.48□□□□□ -1.05
DDR1-278ENST00000515233 SPRR1AP35321 89 aa8.48□□□□□ -1.05
DDR1-278ENST00000515233 AKR1D1P51857 326 aa8.48□□□□□ -1.05
DDR1-278ENST00000515233 DAND5Q8N907 189 aa8.48□□□□□ -1.05
DDR1-278ENST00000515233 Q8NBF4 154 aa8.48□□□□□ -1.05
DDR1-278ENST00000515233 C18orf32Q8TCD1 76 aa8.48□□□□□ -1.05
DDR1-278ENST00000515233 PRYO14603 147 aa8.47□□□□□ -1.05
DDR1-278ENST00000515233 SMIM6P0DI80 62 aa8.46□□□□□ -1.06
DDR1-278ENST00000515233 SMCR5Q8TEV8 140 aa8.46□□□□□ -1.06
DDR1-278ENST00000515233 KCNQ1DNQ9H478 68 aa8.46□□□□□ -1.06
DDR1-278ENST00000515233 A0A0U1RRA0 63 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 KRTAP4-16G5E9R7 235 aaPredicted RBP8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST1H2BKO60814 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST1H2BJP06899 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST1H2BOP23527 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 S100A2P29034 98 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST1H2BBP33778 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 LINC01547P58512 204 aaPredicted RBP8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST1H2BDP58876 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST1H2BCP62807 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 PMCHL1Q16048 86 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST2H2BEQ16778 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.45□□□□□ -1.06
DDR1-278ENST00000515233 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST1H2BHQ93079 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST1H2BNQ99877 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 HIST1H2BMQ99879 126 aa8.45□□□□□ -1.06
DDR1-278ENST00000515233 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
DDR1-278ENST00000515233 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
DDR1-278ENST00000515233 LINC00483Q53H64 154 aa8.44□□□□□ -1.06
DDR1-278ENST00000515233 COA6Q5JTJ3 125 aaKnown RBP8.44□□□□□ -1.06
DDR1-278ENST00000515233 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
DDR1-278ENST00000515233 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
DDR1-278ENST00000515233 KRTAP4-1Q9BYQ7 146 aa8.43□□□□□ -1.06
DDR1-278ENST00000515233 TRAPPC1Q9Y5R8 145 aa8.43□□□□□ -1.06
DDR1-278ENST00000515233 SMIM13P0DJ93 91 aa8.42□□□□□ -1.06
DDR1-278ENST00000515233 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
DDR1-278ENST00000515233 BOD1L2Q8IYS8 172 aa8.42□□□□□ -1.06
DDR1-278ENST00000515233 ETDCA0A1B0GVM5 59 aa8.41□□□□□ -1.06
DDR1-278ENST00000515233 SSBP3-AS1Q7Z2R9 100 aa8.41□□□□□ -1.06
DDR1-278ENST00000515233 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
DDR1-278ENST00000515233 LINC00587B1AMM8 73 aa8.4□□□□□ -1.06
DDR1-278ENST00000515233 NCR3O14931 201 aa8.4□□□□□ -1.06
DDR1-278ENST00000515233 HERV-K104P63124 156 aa8.4□□□□□ -1.06
DDR1-278ENST00000515233 MIR7-3HGQ8N6C7 128 aa8.4□□□□□ -1.06
DDR1-278ENST00000515233 TRBV10-3A0A0K0K1G6 114 aa8.39□□□□□ -1.07
DDR1-278ENST00000515233 S100A12P80511 92 aa8.39□□□□□ -1.07
DDR1-278ENST00000515233 MEIG1Q5JSS6 88 aa8.39□□□□□ -1.07
DDR1-278ENST00000515233 Q8N377 158 aa8.39□□□□□ -1.07
DDR1-278ENST00000515233 FAM19A2Q8N3H0 131 aa8.39□□□□□ -1.07
DDR1-278ENST00000515233 C12orf57Q99622 126 aa8.39□□□□□ -1.07
DDR1-278ENST00000515233 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
DDR1-278ENST00000515233 GAGE2AQ6NT46 116 aa8.38□□□□□ -1.07
DDR1-278ENST00000515233 HIST3H2BBQ8N257 126 aa8.38□□□□□ -1.07
DDR1-278ENST00000515233 B5MCH6 92 aa8.37□□□□□ -1.07
DDR1-278ENST00000515233 LOC107984156A0A0G2JMH3 177 aa8.36□□□□□ -1.07
DDR1-278ENST00000515233 SLC25A20O43772 301 aa8.36□□□□□ -1.07
DDR1-278ENST00000515233 MOBPQ13875 183 aa8.36□□□□□ -1.07
DDR1-278ENST00000515233 ARL17AQ8IVW1 177 aa8.36□□□□□ -1.07
DDR1-278ENST00000515233 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
DDR1-278ENST00000515233 FSIP2Q5CZC0 6907 aa8.35□□□□□ -1.07
DDR1-278ENST00000515233 IGLV9-49A0A0B4J1Y8 123 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms