RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
NEDD9-215ENST00000514660 LINC00469Q8N7U9 141 aa6.15□□□□□ -1.42
NEDD9-215ENST00000514660 TMEM223A0PJW6 202 aa6.14□□□□□ -1.43
NEDD9-215ENST00000514660 SPINK8P0C7L1 97 aa6.14□□□□□ -1.43
NEDD9-215ENST00000514660 PLNP26678 52 aa6.14□□□□□ -1.43
NEDD9-215ENST00000514660 AKR1D1P51857 326 aa6.14□□□□□ -1.43
NEDD9-215ENST00000514660 SYCNQ0VAF6 134 aa6.14□□□□□ -1.43
NEDD9-215ENST00000514660 PYY3Q5JQD4 70 aa6.14□□□□□ -1.43
NEDD9-215ENST00000514660 TMEM170BQ5T4T1 132 aa6.14□□□□□ -1.43
NEDD9-215ENST00000514660 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
NEDD9-215ENST00000514660 LINC01561Q8N1V8 128 aa6.14□□□□□ -1.43
NEDD9-215ENST00000514660 A0A087X002 238 aa6.13□□□□□ -1.43
NEDD9-215ENST00000514660 FAM168BA1KXE4 195 aa6.13□□□□□ -1.43
NEDD9-215ENST00000514660 C20orf202A1L168 122 aa6.13□□□□□ -1.43
NEDD9-215ENST00000514660 SMIM1B2RUZ4 78 aa6.13□□□□□ -1.43
NEDD9-215ENST00000514660 KIAA0087Q14695 138 aa6.13□□□□□ -1.43
NEDD9-215ENST00000514660 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
NEDD9-215ENST00000514660 IGLV5-39A0A0G2JS06 123 aa6.12□□□□□ -1.43
NEDD9-215ENST00000514660 LOC107984640A0A0U1RRK4 108 aa6.12□□□□□ -1.43
NEDD9-215ENST00000514660 H3BRM9 83 aa6.12□□□□□ -1.43
NEDD9-215ENST00000514660 RPL13AP40429 203 aaKnown RBP6.12□□□□□ -1.43
NEDD9-215ENST00000514660 IGHV1-58A0A0C4DH39 117 aa6.11□□□□□ -1.43
NEDD9-215ENST00000514660 MALP21145 153 aa6.11□□□□□ -1.43
NEDD9-215ENST00000514660 KRTAP19-2Q3LHN2 52 aa6.11□□□□□ -1.43
NEDD9-215ENST00000514660 IGKV2D-26A0A0A0MRZ7 120 aa6.1□□□□□ -1.43
NEDD9-215ENST00000514660 APOMO95445 188 aa6.1□□□□□ -1.43
NEDD9-215ENST00000514660 ORAOV1Q8WV07 137 aa6.1□□□□□ -1.43
NEDD9-215ENST00000514660 E9PLD3 99 aa6.09□□□□□ -1.43
NEDD9-215ENST00000514660 LEPROTO15243 131 aa6.09□□□□□ -1.43
NEDD9-215ENST00000514660 COX7B2Q8TF08 81 aa6.09□□□□□ -1.43
NEDD9-215ENST00000514660 TSPEAR-AS2P59090 65 aa6.08□□□□□ -1.44
NEDD9-215ENST00000514660 Q8IZM0 81 aa6.08□□□□□ -1.44
NEDD9-215ENST00000514660 TOMM7Q9P0U1 55 aa6.08□□□□□ -1.44
NEDD9-215ENST00000514660 PKIGQ9Y2B9 76 aa6.08□□□□□ -1.44
NEDD9-215ENST00000514660 IGLV7-46A0A075B6I9 117 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 J3QQQ9 107 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 HERVK_113P61574 105 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 MT1HP80294 61 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 RPL18AQ02543 176 aaKnown RBP6.07□□□□□ -1.44
NEDD9-215ENST00000514660 SPAG11BQ08648 103 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 C6orf226Q5I0X4 101 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 C10orf25Q5T742 122 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 C2orf82Q6UX34 121 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 UNQ6190/PRO20217Q6UXQ8 127 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 PLEKHB2Q96CS7 222 aa6.07□□□□□ -1.44
NEDD9-215ENST00000514660 CRYGAP11844 174 aa6.06□□□□□ -1.44
NEDD9-215ENST00000514660 C2orf48Q96LS8 159 aa6.06□□□□□ -1.44
NEDD9-215ENST00000514660 TTTY13Q9BZ97 58 aa6.06□□□□□ -1.44
NEDD9-215ENST00000514660 HSBP1L1C9JCN9 74 aa6.05□□□□□ -1.44
NEDD9-215ENST00000514660 PRSS2P07478 247 aa6.05□□□□□ -1.44
NEDD9-215ENST00000514660 KRTAP13-2Q52LG2 175 aa6.05□□□□□ -1.44
NEDD9-215ENST00000514660 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
NEDD9-215ENST00000514660 ZNF625Q96I27 306 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-215ENST00000514660 VAMP8Q9BV40 100 aa6.05□□□□□ -1.44
NEDD9-215ENST00000514660 ANAPC11Q9NYG5 84 aa6.05□□□□□ -1.44
NEDD9-215ENST00000514660 PAM16Q9Y3D7 125 aa6.05□□□□□ -1.44
NEDD9-215ENST00000514660 F8WDY8 70 aa6.04□□□□□ -1.44
NEDD9-215ENST00000514660 SMIM6P0DI80 62 aa6.04□□□□□ -1.44
NEDD9-215ENST00000514660 ASB16-AS1Q495Z4 193 aa6.04□□□□□ -1.44
NEDD9-215ENST00000514660 SPATA45Q537H7 98 aa6.04□□□□□ -1.44
NEDD9-215ENST00000514660 FAM19A5Q7Z5A7 132 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-215ENST00000514660 CAMK2N2Q96S95 79 aa6.04□□□□□ -1.44
NEDD9-215ENST00000514660 C6orf48Q9UBA6 75 aa6.04□□□□□ -1.44
NEDD9-215ENST00000514660 NDUFA12Q9UI09 145 aa6.04□□□□□ -1.44
NEDD9-215ENST00000514660 NDUFA1O15239 70 aa6.03□□□□□ -1.44
NEDD9-215ENST00000514660 LGALS3P17931 250 aaKnown RBP6.03□□□□□ -1.44
NEDD9-215ENST00000514660 NMUP48645 174 aa6.03□□□□□ -1.44
NEDD9-215ENST00000514660 CKS1BP61024 79 aa6.03□□□□□ -1.44
NEDD9-215ENST00000514660 MYMXA0A1B0GTQ4 84 aa6.02□□□□□ -1.45
NEDD9-215ENST00000514660 CXCL5P42830 114 aa6.02□□□□□ -1.45
NEDD9-215ENST00000514660 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-215ENST00000514660 RNF151Q2KHN1 245 aa6.02□□□□□ -1.45
NEDD9-215ENST00000514660 LINC00518Q8N0U6 118 aa6.02□□□□□ -1.45
NEDD9-215ENST00000514660 TYMSOSQ8TAI1 123 aa6.02□□□□□ -1.45
NEDD9-215ENST00000514660 C14orf144Q96I85 54 aa6.02□□□□□ -1.45
NEDD9-215ENST00000514660 A0A0J9YXY3 114 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 TRBV30A0A0K0K1B3 111 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 ZNF815PA8K554 130 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 ZNF861PO60384 105 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 COX8AP10176 69 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 S100A12P80511 92 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 BOD1L2Q8IYS8 172 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 C12orf57Q99622 126 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 PPDPFQ9H3Y8 114 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 TP73-AS1Q9UF72 201 aa6.01□□□□□ -1.45
NEDD9-215ENST00000514660 DLEU1O43261 78 aa6□□□□□ -1.45
NEDD9-215ENST00000514660 SMIM13P0DJ93 91 aa5.99□□□□□ -1.45
NEDD9-215ENST00000514660 HERV-K104P63124 156 aa5.99□□□□□ -1.45
NEDD9-215ENST00000514660 ADAMTSL4-AS1Q5T5F5 129 aa5.99□□□□□ -1.45
NEDD9-215ENST00000514660 SFTA2Q6UW10 78 aa5.99□□□□□ -1.45
NEDD9-215ENST00000514660 PRO1933Q9H354 126 aa5.99□□□□□ -1.45
NEDD9-215ENST00000514660 A0A0U1RRA0 63 aa5.98□□□□□ -1.45
NEDD9-215ENST00000514660 M0QXV9 152 aa5.98□□□□□ -1.45
NEDD9-215ENST00000514660 TLX1NBP0CAT3 122 aa5.98□□□□□ -1.45
NEDD9-215ENST00000514660 PFN2P35080 140 aa5.98□□□□□ -1.45
NEDD9-215ENST00000514660 LITAFQ99732 161 aa5.98□□□□□ -1.45
NEDD9-215ENST00000514660 ERG28Q9UKR5 140 aa5.98□□□□□ -1.45
NEDD9-215ENST00000514660 LINC00158P58513 81 aa5.97□□□□□ -1.45
NEDD9-215ENST00000514660 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
NEDD9-215ENST00000514660 SLC25A34Q6PIV7 304 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms