RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 GVQW2A0A096LPI5 108 aaPredicted RBP5.49□□□□□ -1.53
CPNE4-211ENST00000514439 TMEM126AQ9H061 195 aa5.49□□□□□ -1.53
CPNE4-211ENST00000514439 BAHCC1Q9P281 2608 aa5.48□□□□□ -1.53
CPNE4-211ENST00000514439 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
CPNE4-211ENST00000514439 C6orf48Q9UBA6 75 aa5.48□□□□□ -1.53
CPNE4-211ENST00000514439 HIGD2BQ4VC39 106 aa5.48□□□□□ -1.53
CPNE4-211ENST00000514439 LINC00528Q8N1L1 170 aa5.48□□□□□ -1.53
CPNE4-211ENST00000514439 C15orf53Q8NAA6 179 aa5.48□□□□□ -1.53
CPNE4-211ENST00000514439 SNCGO76070 127 aa5.47□□□□□ -1.53
CPNE4-211ENST00000514439 LINC01556Q5JQF7 62 aa5.47□□□□□ -1.53
CPNE4-211ENST00000514439 ZNF561-AS1K7EIQ3 104 aa5.47□□□□□ -1.53
CPNE4-211ENST00000514439 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
CPNE4-211ENST00000514439 SLPIP03973 132 aa5.46□□□□□ -1.54
CPNE4-211ENST00000514439 INAFM2P0DMQ5 153 aa5.46□□□□□ -1.54
CPNE4-211ENST00000514439 TTC32Q5I0X7 151 aa5.46□□□□□ -1.54
CPNE4-211ENST00000514439 C15orf56Q8N910 161 aa5.46□□□□□ -1.54
CPNE4-211ENST00000514439 CAMK2N2Q96S95 79 aa5.46□□□□□ -1.54
CPNE4-211ENST00000514439 C1orf43Q9BWL3 253 aa5.46□□□□□ -1.54
CPNE4-211ENST00000514439 K7EIL1 84 aa5.46□□□□□ -1.54
CPNE4-211ENST00000514439 C9orf129Q5T035 196 aaKnown RBP5.46□□□□□ -1.54
CPNE4-211ENST00000514439 TM2D3Q9BRN9 247 aa5.46□□□□□ -1.54
CPNE4-211ENST00000514439 XAGE1AQ9HD64 81 aa5.46□□□□□ -1.54
CPNE4-211ENST00000514439 TRAV10A0A0B4J240 114 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 RPL18AQ02543 176 aaKnown RBP5.45□□□□□ -1.54
CPNE4-211ENST00000514439 C6orf99Q4VX62 202 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 NBEAL1Q6ZS30 2694 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 IGKV2D-24A0A075B6R9 120 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 A0A1B0GX51 115 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 ACYP1P07311 99 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 Q6ZRU5 148 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 Q8N814 137 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 MRAPQ8TCY5 172 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 LINC00167Q96N53 147 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 ORMDL1Q9P0S3 153 aa5.45□□□□□ -1.54
CPNE4-211ENST00000514439 IGLV6-57P01721 117 aa5.44□□□□□ -1.54
CPNE4-211ENST00000514439 DNAH10OSP0CZ25 163 aa5.44□□□□□ -1.54
CPNE4-211ENST00000514439 GAGE2BQ13066 116 aa5.43□□□□□ -1.54
CPNE4-211ENST00000514439 GAGE2EQ4V326 116 aa5.43□□□□□ -1.54
CPNE4-211ENST00000514439 C2orf48Q96LS8 159 aa5.43□□□□□ -1.54
CPNE4-211ENST00000514439 OBSCN-AS1Q96MR7 158 aa5.43□□□□□ -1.54
CPNE4-211ENST00000514439 C14orf132Q9NPU4 83 aa5.43□□□□□ -1.54
CPNE4-211ENST00000514439 GAGE2DQ9UEU5 116 aa5.43□□□□□ -1.54
CPNE4-211ENST00000514439 GAGE2AQ6NT46 116 aa5.43□□□□□ -1.54
CPNE4-211ENST00000514439 TRBV10-3A0A0K0K1G6 114 aa5.42□□□□□ -1.54
CPNE4-211ENST00000514439 SMCR5Q8TEV8 140 aa5.42□□□□□ -1.54
CPNE4-211ENST00000514439 LINC00588Q9Y4M8 146 aa5.42□□□□□ -1.54
CPNE4-211ENST00000514439 A0A1B0GV72 72 aa5.42□□□□□ -1.54
CPNE4-211ENST00000514439 Q6Q795 121 aa5.42□□□□□ -1.54
CPNE4-211ENST00000514439 LINC00575Q6W349 94 aa5.42□□□□□ -1.54
CPNE4-211ENST00000514439 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
CPNE4-211ENST00000514439 HUWE1Q7Z6Z7 4374 aaKnown RBP5.41□□□□□ -1.54
CPNE4-211ENST00000514439 NDUFC2-KCTD14E9PQ53 114 aa5.41□□□□□ -1.54
CPNE4-211ENST00000514439 MGAM2Q2M2H8 2515 aa5.41□□□□□ -1.54
CPNE4-211ENST00000514439 VPREB1P12018 145 aa5.41□□□□□ -1.54
CPNE4-211ENST00000514439 SDIM1Q6ZPB5 146 aa5.41□□□□□ -1.54
CPNE4-211ENST00000514439 TRAV23DV6A0A075B6W5 121 aa5.4□□□□□ -1.54
CPNE4-211ENST00000514439 F8WDY8 70 aa5.4□□□□□ -1.55
CPNE4-211ENST00000514439 TMEM256-PLSCR3K7ERE1 68 aa5.4□□□□□ -1.55
CPNE4-211ENST00000514439 SYCNQ0VAF6 134 aa5.4□□□□□ -1.55
CPNE4-211ENST00000514439 TRBV7-7A0A0K0K1E9 115 aa5.39□□□□□ -1.55
CPNE4-211ENST00000514439 hADV29S1A0JD25 119 aa5.39□□□□□ -1.55
CPNE4-211ENST00000514439 Q6ZRP5 223 aa5.39□□□□□ -1.55
CPNE4-211ENST00000514439 LINC00643Q86TS7 51 aa5.39□□□□□ -1.55
CPNE4-211ENST00000514439 DIRC1Q969H9 104 aa5.39□□□□□ -1.55
CPNE4-211ENST00000514439 ZNF73O43830 326 aaPredicted RBP5.39□□□□□ -1.55
CPNE4-211ENST00000514439 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
CPNE4-211ENST00000514439 JMJD7-PLA2G4BH0Y9G9 81 aa5.38□□□□□ -1.55
CPNE4-211ENST00000514439 NDUFV3P56181 108 aaKnown RBP5.38□□□□□ -1.55
CPNE4-211ENST00000514439 CASC10Q5T4H9 136 aa5.38□□□□□ -1.55
CPNE4-211ENST00000514439 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
CPNE4-211ENST00000514439 M0R378 163 aa5.37□□□□□ -1.55
CPNE4-211ENST00000514439 USP17L23D6RBM5 183 aa5.36□□□□□ -1.55
CPNE4-211ENST00000514439 COX7BP24311 80 aa5.36□□□□□ -1.55
CPNE4-211ENST00000514439 Q6ZQY7 126 aa5.36□□□□□ -1.55
CPNE4-211ENST00000514439 UPK3BQ9BT76 320 aa5.36□□□□□ -1.55
CPNE4-211ENST00000514439 LINC00846Q9NV44 126 aa5.36□□□□□ -1.55
CPNE4-211ENST00000514439 CCKP06307 115 aa5.36□□□□□ -1.55
CPNE4-211ENST00000514439 NHLRC4P0CG21 123 aaPredicted RBP5.36□□□□□ -1.55
CPNE4-211ENST00000514439 ELOF1P60002 83 aaKnown RBP5.36□□□□□ -1.55
CPNE4-211ENST00000514439 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
CPNE4-211ENST00000514439 RMI2Q96E14 147 aa5.35□□□□□ -1.55
CPNE4-211ENST00000514439 IMUPQ9GZP8 106 aa5.35□□□□□ -1.55
CPNE4-211ENST00000514439 DNAH1Q9P2D7 4330 aa5.35□□□□□ -1.55
CPNE4-211ENST00000514439 MDFIQ99750 246 aa5.35□□□□□ -1.55
CPNE4-211ENST00000514439 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
CPNE4-211ENST00000514439 SERTAD4-AS1Q5TG53 156 aa5.34□□□□□ -1.55
CPNE4-211ENST00000514439 STAB2Q8WWQ8 2551 aa5.34□□□□□ -1.55
CPNE4-211ENST00000514439 LAMTOR3Q9UHA4 124 aa5.34□□□□□ -1.56
CPNE4-211ENST00000514439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.33□□□□□ -1.56
CPNE4-211ENST00000514439 NKAPP1Q8N9T2 125 aa5.33□□□□□ -1.56
CPNE4-211ENST00000514439 FAM236AA0A1B0GUQ0 79 aa5.32□□□□□ -1.56
CPNE4-211ENST00000514439 FAM236BA0A1B0GV22 79 aa5.32□□□□□ -1.56
CPNE4-211ENST00000514439 RBM3P98179 157 aaKnown RBP5.32□□□□□ -1.56
CPNE4-211ENST00000514439 H3BQ85 93 aa5.32□□□□□ -1.56
CPNE4-211ENST00000514439 C7orf33Q8WU49 177 aa5.32□□□□□ -1.56
CPNE4-211ENST00000514439 Q6JHZ5 121 aa5.31□□□□□ -1.56
CPNE4-211ENST00000514439 Q6ZQT0 140 aa5.31□□□□□ -1.56
CPNE4-211ENST00000514439 KRTAP1-5Q9BYS1 174 aa5.31□□□□□ -1.56
CPNE4-211ENST00000514439 LOC110117498A0A087WWA1 95 aa5.31□□□□□ -1.56
CPNE4-211ENST00000514439 IGKV3D-7A0A0C4DH55 119 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms