RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 H3BT86 120 aa9.86□□□□□ -0.83
VCAN-211ENST00000513984 TRACP01848 142 aa9.86□□□□□ -0.83
VCAN-211ENST00000513984 PRR3P79522 188 aaKnown RBP9.86□□□□□ -0.83
VCAN-211ENST00000513984 CARD19Q96LW7 228 aa9.85□□□□□ -0.83
VCAN-211ENST00000513984 FAM218AQ96MZ4 157 aa9.85□□□□□ -0.83
VCAN-211ENST00000513984 TMEM126AQ9H061 195 aa9.85□□□□□ -0.83
VCAN-211ENST00000513984 H0YGX0 51 aa9.84□□□□□ -0.83
VCAN-211ENST00000513984 J3QR89 54 aa9.84□□□□□ -0.83
VCAN-211ENST00000513984 RNF151Q2KHN1 245 aa9.84□□□□□ -0.83
VCAN-211ENST00000513984 PPDPFLQ8WWR9 84 aa9.84□□□□□ -0.83
VCAN-211ENST00000513984 NDUFC2-KCTD14E9PQ53 114 aa9.84□□□□□ -0.83
VCAN-211ENST00000513984 NCR3O14931 201 aa9.84□□□□□ -0.83
VCAN-211ENST00000513984 SYCNQ0VAF6 134 aa9.84□□□□□ -0.83
VCAN-211ENST00000513984 PRKDCP78527 4128 aaKnown RBP9.83□□□□□ -0.84
VCAN-211ENST00000513984 NUPR2A6NF83 97 aa9.83□□□□□ -0.84
VCAN-211ENST00000513984 USP17L23D6RBM5 183 aa9.82□□□□□ -0.84
VCAN-211ENST00000513984 CASC10Q5T4H9 136 aa9.82□□□□□ -0.84
VCAN-211ENST00000513984 DNHD1Q96M86 4753 aa9.82□□□□□ -0.84
VCAN-211ENST00000513984 UBE2DNLQ8IWF7 75 aa9.82□□□□□ -0.84
VCAN-211ENST00000513984 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
VCAN-211ENST00000513984 KRTAP1-5Q9BYS1 174 aa9.81□□□□□ -0.84
VCAN-211ENST00000513984 VPS25Q9BRG1 176 aa9.8□□□□□ -0.84
VCAN-211ENST00000513984 IGLV6-57P01721 117 aa9.79□□□□□ -0.84
VCAN-211ENST00000513984 KRTAP21-3Q3LHN1 58 aa9.79□□□□□ -0.84
VCAN-211ENST00000513984 S100A7L2Q5SY68 101 aa9.79□□□□□ -0.84
VCAN-211ENST00000513984 CSMD3Q7Z407 3707 aa9.79□□□□□ -0.84
VCAN-211ENST00000513984 A0A087WYN8 130 aa9.79□□□□□ -0.84
VCAN-211ENST00000513984 RPL18AQ02543 176 aaKnown RBP9.79□□□□□ -0.84
VCAN-211ENST00000513984 VPREB1P12018 145 aa9.78□□□□□ -0.84
VCAN-211ENST00000513984 Q6ZRP5 223 aa9.78□□□□□ -0.84
VCAN-211ENST00000513984 SLPIP03973 132 aa9.77□□□□□ -0.84
VCAN-211ENST00000513984 TLX1NBP0CAT3 122 aa9.77□□□□□ -0.84
VCAN-211ENST00000513984 LYSTQ99698 3801 aa9.77□□□□□ -0.84
VCAN-211ENST00000513984 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
VCAN-211ENST00000513984 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
VCAN-211ENST00000513984 DNAH7Q8WXX0 4024 aa9.76□□□□□ -0.85
VCAN-211ENST00000513984 TEX49A0A1B0GTD5 131 aa9.75□□□□□ -0.85
VCAN-211ENST00000513984 A0A1B0GX51 115 aa9.75□□□□□ -0.85
VCAN-211ENST00000513984 DNAL4O96015 105 aa9.75□□□□□ -0.85
VCAN-211ENST00000513984 PLECQ15149 4684 aaKnown RBP9.75□□□□□ -0.85
VCAN-211ENST00000513984 LECT2O14960 151 aa9.75□□□□□ -0.85
VCAN-211ENST00000513984 BAALC-AS2P0C853 105 aa9.75□□□□□ -0.85
VCAN-211ENST00000513984 C6orf99Q4VX62 202 aa9.75□□□□□ -0.85
VCAN-211ENST00000513984 TRBV10-3A0A0K0K1G6 114 aa9.74□□□□□ -0.85
VCAN-211ENST00000513984 C9orf129Q5T035 196 aaKnown RBP9.74□□□□□ -0.85
VCAN-211ENST00000513984 MEGF8Q7Z7M0 2845 aa9.73□□□□□ -0.85
VCAN-211ENST00000513984 M0R378 163 aa9.72□□□□□ -0.85
VCAN-211ENST00000513984 CBY1Q9Y3M2 126 aa9.72□□□□□ -0.85
VCAN-211ENST00000513984 C22orf24Q9Y442 160 aa9.72□□□□□ -0.85
VCAN-211ENST00000513984 LINC00167Q96N53 147 aa9.72□□□□□ -0.85
VCAN-211ENST00000513984 TRAV23DV6A0A075B6W5 121 aa9.71□□□□□ -0.85
VCAN-211ENST00000513984 TTC32Q5I0X7 151 aa9.71□□□□□ -0.85
VCAN-211ENST00000513984 STARD9Q9P2P6 4700 aa9.7□□□□□ -0.86
VCAN-211ENST00000513984 Q8N814 137 aa9.7□□□□□ -0.86
VCAN-211ENST00000513984 PLA2G2DQ9UNK4 145 aa9.7□□□□□ -0.86
VCAN-211ENST00000513984 NBDYA0A0U1RRE5 68 aa9.69□□□□□ -0.86
VCAN-211ENST00000513984 PSCAO43653 123 aa9.69□□□□□ -0.86
VCAN-211ENST00000513984 DNAH10Q8IVF4 4471 aa9.69□□□□□ -0.86
VCAN-211ENST00000513984 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
VCAN-211ENST00000513984 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
VCAN-211ENST00000513984 ORMDL1Q9P0S3 153 aa9.68□□□□□ -0.86
VCAN-211ENST00000513984 TENM2Q9NT68 2774 aa9.67□□□□□ -0.86
VCAN-211ENST00000513984 LOC107984640A0A0U1RRK4 108 aa9.67□□□□□ -0.86
VCAN-211ENST00000513984 ZNF73O43830 326 aaPredicted RBP9.67□□□□□ -0.86
VCAN-211ENST00000513984 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
VCAN-211ENST00000513984 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
VCAN-211ENST00000513984 VPS13DQ5THJ4 4388 aa9.67□□□□□ -0.86
VCAN-211ENST00000513984 SNCGO76070 127 aa9.66□□□□□ -0.86
VCAN-211ENST00000513984 CDIP1Q9H305 208 aa9.66□□□□□ -0.86
VCAN-211ENST00000513984 IGLV5-37A0A075B6J1 123 aa9.66□□□□□ -0.86
VCAN-211ENST00000513984 TRBV7-6A0A0J9YX20 115 aa9.66□□□□□ -0.86
VCAN-211ENST00000513984 C14orf177Q52M58 125 aa9.66□□□□□ -0.86
VCAN-211ENST00000513984 NKAPP1Q8N9T2 125 aa9.66□□□□□ -0.86
VCAN-211ENST00000513984 hADV29S1A0JD25 119 aa9.64□□□□□ -0.87
VCAN-211ENST00000513984 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
VCAN-211ENST00000513984 GAGE2BQ13066 116 aa9.63□□□□□ -0.87
VCAN-211ENST00000513984 Q6ZRN7 208 aaPredicted RBP9.63□□□□□ -0.87
VCAN-211ENST00000513984 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
VCAN-211ENST00000513984 OBSCN-AS1Q96MR7 158 aa9.63□□□□□ -0.87
VCAN-211ENST00000513984 FAM240AA0A1B0GVK7 77 aa9.62□□□□□ -0.87
VCAN-211ENST00000513984 INAFM2P0DMQ5 153 aa9.62□□□□□ -0.87
VCAN-211ENST00000513984 COX7BP24311 80 aa9.62□□□□□ -0.87
VCAN-211ENST00000513984 KCNQ1DNQ9H478 68 aa9.62□□□□□ -0.87
VCAN-211ENST00000513984 LRCOL1A6NCL2 159 aa9.61□□□□□ -0.87
VCAN-211ENST00000513984 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
VCAN-211ENST00000513984 TMEM256-PLSCR3K7ERE1 68 aa9.61□□□□□ -0.87
VCAN-211ENST00000513984 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
VCAN-211ENST00000513984 SIGMAR1Q99720 223 aa9.6□□□□□ -0.87
VCAN-211ENST00000513984 C16orf90A8MZG2 172 aa9.59□□□□□ -0.88
VCAN-211ENST00000513984 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.88
VCAN-211ENST00000513984 IGLV1-50A0A075B6I6 118 aa9.57□□□□□ -0.88
VCAN-211ENST00000513984 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.57□□□□□ -0.88
VCAN-211ENST00000513984 A0A096LNI7 61 aa9.57□□□□□ -0.88
VCAN-211ENST00000513984 H3BQ85 93 aa9.56□□□□□ -0.88
VCAN-211ENST00000513984 XGP55808 180 aa9.56□□□□□ -0.88
VCAN-211ENST00000513984 Q6ZQY7 126 aa9.56□□□□□ -0.88
VCAN-211ENST00000513984 FBN3Q75N90 2809 aa9.56□□□□□ -0.88
VCAN-211ENST00000513984 PRYO14603 147 aa9.56□□□□□ -0.88
VCAN-211ENST00000513984 ACYP1P07311 99 aa9.56□□□□□ -0.88
VCAN-211ENST00000513984 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms