RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 IGKV2D-26A0A0A0MRZ7 120 aa4.83□□□□□ -1.64
HMGXB3-204ENST00000513318 LINC00587B1AMM8 73 aa4.83□□□□□ -1.64
HMGXB3-204ENST00000513318 MAJINQ3KP22 176 aa4.83□□□□□ -1.64
HMGXB3-204ENST00000513318 MEIG1Q5JSS6 88 aa4.83□□□□□ -1.64
HMGXB3-204ENST00000513318 PANO1I0J062 215 aa4.82□□□□□ -1.64
HMGXB3-204ENST00000513318 PFN2P35080 140 aa4.82□□□□□ -1.64
HMGXB3-204ENST00000513318 GAGE2EQ4V326 116 aa4.82□□□□□ -1.64
HMGXB3-204ENST00000513318 SCXQ7RTU7 201 aa4.82□□□□□ -1.64
HMGXB3-204ENST00000513318 GAGE2DQ9UEU5 116 aa4.82□□□□□ -1.64
HMGXB3-204ENST00000513318 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
HMGXB3-204ENST00000513318 A0A087WYN8 130 aa4.81□□□□□ -1.64
HMGXB3-204ENST00000513318 ZNF815PA8K554 130 aa4.81□□□□□ -1.64
HMGXB3-204ENST00000513318 XGP55808 180 aa4.81□□□□□ -1.64
HMGXB3-204ENST00000513318 LINC00158P58513 81 aa4.81□□□□□ -1.64
HMGXB3-204ENST00000513318 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
HMGXB3-204ENST00000513318 DPH3Q96FX2 82 aa4.81□□□□□ -1.64
HMGXB3-204ENST00000513318 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
HMGXB3-204ENST00000513318 A0A0J9YXY3 114 aa4.8□□□□□ -1.64
HMGXB3-204ENST00000513318 SMIM13P0DJ93 91 aa4.8□□□□□ -1.64
HMGXB3-204ENST00000513318 HAMPP81172 84 aa4.8□□□□□ -1.64
HMGXB3-204ENST00000513318 C9orf129Q5T035 196 aaKnown RBP4.8□□□□□ -1.64
HMGXB3-204ENST00000513318 VAMP8Q9BV40 100 aa4.8□□□□□ -1.64
HMGXB3-204ENST00000513318 TTTY13Q9BZ97 58 aa4.8□□□□□ -1.64
HMGXB3-204ENST00000513318 XAGE1AQ9HD64 81 aa4.8□□□□□ -1.64
HMGXB3-204ENST00000513318 PLAC8Q9NZF1 115 aa4.8□□□□□ -1.64
HMGXB3-204ENST00000513318 APOBP04114 4563 aaKnown RBP4.79□□□□□ -1.64
HMGXB3-204ENST00000513318 A0A0U1RRA0 63 aa4.79□□□□□ -1.64
HMGXB3-204ENST00000513318 PCP4L1A6NKN8 68 aa4.79□□□□□ -1.64
HMGXB3-204ENST00000513318 EPM2AB3EWF7 344 aa4.79□□□□□ -1.64
HMGXB3-204ENST00000513318 PCP2Q8IVA1 136 aa4.79□□□□□ -1.64
HMGXB3-204ENST00000513318 MIR7-3HGQ8N6C7 128 aa4.79□□□□□ -1.64
HMGXB3-204ENST00000513318 SND1-IT1Q9HBX3 110 aa4.79□□□□□ -1.64
HMGXB3-204ENST00000513318 FAM168BA1KXE4 195 aa4.78□□□□□ -1.64
HMGXB3-204ENST00000513318 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
HMGXB3-204ENST00000513318 TIMM17BO60830 172 aa4.78□□□□□ -1.64
HMGXB3-204ENST00000513318 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
HMGXB3-204ENST00000513318 FAM19A5Q7Z5A7 132 aaPredicted RBP4.78□□□□□ -1.64
HMGXB3-204ENST00000513318 PAM16Q9Y3D7 125 aa4.78□□□□□ -1.64
HMGXB3-204ENST00000513318 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
HMGXB3-204ENST00000513318 A0A1W2PNN7 141 aa4.77□□□□□ -1.65
HMGXB3-204ENST00000513318 M0QXV9 152 aa4.77□□□□□ -1.65
HMGXB3-204ENST00000513318 CTAG1AP78358 180 aa4.77□□□□□ -1.65
HMGXB3-204ENST00000513318 SPATA45Q537H7 98 aa4.77□□□□□ -1.65
HMGXB3-204ENST00000513318 MIEN1Q9BRT3 115 aa4.77□□□□□ -1.65
HMGXB3-204ENST00000513318 TP73-AS1Q9UF72 201 aa4.77□□□□□ -1.65
HMGXB3-204ENST00000513318 IGLV5-37A0A075B6J1 123 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 LOC107984156A0A0G2JMH3 177 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 COX8AP10176 69 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 RPL24P83731 157 aaKnown RBP4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 SERTAD4-AS1Q5TG53 156 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 ARL17AQ8IVW1 177 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 BOD1L2Q8IYS8 172 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 DAND5Q8N907 189 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 C7orf33Q8WU49 177 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 LITAFQ99732 161 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 HSPG2P98160 4391 aa4.76□□□□□ -1.65
HMGXB3-204ENST00000513318 DLEU1O43261 78 aa4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 SMR3BP02814 79 aaPredicted RBP4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 VPREB1P12018 145 aa4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 ADAMTSL4-AS1Q5T5F5 129 aa4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 Q6ZVH6 145 aa4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 PHF5AQ7RTV0 110 aaKnown RBP4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 NKAPP1Q8N9T2 125 aa4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 SPANXDQ9BXN6 97 aa4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 SPANXCQ9NY87 97 aa4.75□□□□□ -1.65
HMGXB3-204ENST00000513318 TSTD3H0UI37 97 aa4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 DDTP30046 118 aa4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 LBHQ53QV2 105 aaPredicted RBP4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 SLC25A34Q6PIV7 304 aa4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 MRPL55Q7Z7F7 128 aaKnown RBP4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 Q8N1X5 172 aa4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 COPS9Q8WXC6 57 aa4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 C14orf144Q96I85 54 aa4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 SPANXB1Q9NS25 103 aaPredicted RBP4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 C22orf24Q9Y442 160 aa4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 RYR1P21817 5038 aa4.74□□□□□ -1.65
HMGXB3-204ENST00000513318 NDUFC2O95298 119 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 IFITM1P13164 125 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 NPC2P61916 151 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 UBE2BP63146 152 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 Q5VSD8 79 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 SOSTDC1Q6X4U4 206 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 LINC00308Q8TCZ7 52 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 PRO1933Q9H354 126 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 PPDPFQ9H3Y8 114 aa4.73□□□□□ -1.65
HMGXB3-204ENST00000513318 TRBV10-2A0A0K0K1G8 114 aa4.72□□□□□ -1.65
HMGXB3-204ENST00000513318 RPL37AP61513 92 aaKnown RBP4.72□□□□□ -1.65
HMGXB3-204ENST00000513318 SRSF9Q13242 221 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGXB3-204ENST00000513318 Q8NDZ9 215 aa4.72□□□□□ -1.65
HMGXB3-204ENST00000513318 HIGD1BQ9P298 99 aa4.72□□□□□ -1.65
HMGXB3-204ENST00000513318 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
HMGXB3-204ENST00000513318 M0R378 163 aa4.71□□□□□ -1.66
HMGXB3-204ENST00000513318 NCR3O14931 201 aa4.71□□□□□ -1.66
HMGXB3-204ENST00000513318 PRR3P79522 188 aaKnown RBP4.71□□□□□ -1.66
HMGXB3-204ENST00000513318 LINC00167Q96N53 147 aa4.71□□□□□ -1.66
HMGXB3-204ENST00000513318 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.66
HMGXB3-204ENST00000513318 GAGE10A6NGK3 116 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms