RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 SCGB1D4Q6XE38 83 aa12.4□□□□□ -0.42
SMAD1-211ENST00000512019 SCXQ7RTU7 201 aa12.4□□□□□ -0.42
SMAD1-211ENST00000512019 XAGE1AQ9HD64 81 aa12.4□□□□□ -0.42
SMAD1-211ENST00000512019 A0A087WYN8 130 aa12.39□□□□□ -0.43
SMAD1-211ENST00000512019 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
SMAD1-211ENST00000512019 SND1-IT1Q9HBX3 110 aa12.39□□□□□ -0.43
SMAD1-211ENST00000512019 TIMM17BO60830 172 aa12.38□□□□□ -0.43
SMAD1-211ENST00000512019 MIR7-3HGQ8N6C7 128 aa12.38□□□□□ -0.43
SMAD1-211ENST00000512019 CIRBP-AS1Q8TBR5 109 aa12.38□□□□□ -0.43
SMAD1-211ENST00000512019 PLAC8Q9NZF1 115 aa12.38□□□□□ -0.43
SMAD1-211ENST00000512019 LOC105371267A0A1B0GV96 52 aa12.35□□□□□ -0.43
SMAD1-211ENST00000512019 COX8AP10176 69 aa12.35□□□□□ -0.43
SMAD1-211ENST00000512019 S100A12P80511 92 aa12.35□□□□□ -0.43
SMAD1-211ENST00000512019 TMEM238C9JI98 176 aa12.34□□□□□ -0.43
SMAD1-211ENST00000512019 SMIM6P0DI80 62 aa12.34□□□□□ -0.43
SMAD1-211ENST00000512019 A0A1W2PNN7 141 aa12.33□□□□□ -0.44
SMAD1-211ENST00000512019 FAM168BA1KXE4 195 aa12.33□□□□□ -0.44
SMAD1-211ENST00000512019 FAM19A5Q7Z5A7 132 aaPredicted RBP12.33□□□□□ -0.44
SMAD1-211ENST00000512019 BOD1L2Q8IYS8 172 aa12.33□□□□□ -0.44
SMAD1-211ENST00000512019 DAND5Q8N907 189 aa12.33□□□□□ -0.44
SMAD1-211ENST00000512019 LITAFQ99732 161 aa12.33□□□□□ -0.44
SMAD1-211ENST00000512019 MIEN1Q9BRT3 115 aa12.33□□□□□ -0.44
SMAD1-211ENST00000512019 J3QL48 77 aa12.32□□□□□ -0.44
SMAD1-211ENST00000512019 DLEU1O43261 78 aa12.32□□□□□ -0.44
SMAD1-211ENST00000512019 PLA2G2DQ9UNK4 145 aa12.32□□□□□ -0.44
SMAD1-211ENST00000512019 ADAMTSL4-AS1Q5T5F5 129 aa12.31□□□□□ -0.44
SMAD1-211ENST00000512019 LINC00528Q8N1L1 170 aa12.31□□□□□ -0.44
SMAD1-211ENST00000512019 RPL24P83731 157 aaKnown RBP12.3□□□□□ -0.44
SMAD1-211ENST00000512019 SERTAD4-AS1Q5TG53 156 aa12.3□□□□□ -0.44
SMAD1-211ENST00000512019 C14orf144Q96I85 54 aa12.3□□□□□ -0.44
SMAD1-211ENST00000512019 M0QXV9 152 aa12.29□□□□□ -0.44
SMAD1-211ENST00000512019 SLC25A34Q6PIV7 304 aa12.29□□□□□ -0.44
SMAD1-211ENST00000512019 SPANXDQ9BXN6 97 aa12.29□□□□□ -0.44
SMAD1-211ENST00000512019 SPANXCQ9NY87 97 aa12.29□□□□□ -0.44
SMAD1-211ENST00000512019 LOC107984156A0A0G2JMH3 177 aa12.28□□□□□ -0.44
SMAD1-211ENST00000512019 PLA2G1BP04054 148 aaKnown RBP12.28□□□□□ -0.44
SMAD1-211ENST00000512019 Q6ZVH6 145 aa12.28□□□□□ -0.44
SMAD1-211ENST00000512019 ARL17AQ8IVW1 177 aa12.28□□□□□ -0.44
SMAD1-211ENST00000512019 NKAPP1Q8N9T2 125 aa12.28□□□□□ -0.44
SMAD1-211ENST00000512019 COPS9Q8WXC6 57 aa12.28□□□□□ -0.44
SMAD1-211ENST00000512019 IGLV5-37A0A075B6J1 123 aa12.27□□□□□ -0.45
SMAD1-211ENST00000512019 LRP1Q07954 4544 aaKnown RBP12.26□□□□□ -0.45
SMAD1-211ENST00000512019 NPC2P61916 151 aa12.26□□□□□ -0.45
SMAD1-211ENST00000512019 KRTAP7-1Q8IUC3 87 aa12.26□□□□□ -0.45
SMAD1-211ENST00000512019 LINC00308Q8TCZ7 52 aa12.26□□□□□ -0.45
SMAD1-211ENST00000512019 C7orf33Q8WU49 177 aa12.26□□□□□ -0.45
SMAD1-211ENST00000512019 TP73-AS1Q9UF72 201 aa12.26□□□□□ -0.45
SMAD1-211ENST00000512019 FAT3Q8TDW7 4589 aa12.25□□□□□ -0.45
SMAD1-211ENST00000512019 VPREB1P12018 145 aa12.25□□□□□ -0.45
SMAD1-211ENST00000512019 LBHQ53QV2 105 aaPredicted RBP12.25□□□□□ -0.45
SMAD1-211ENST00000512019 SPANXB1Q9NS25 103 aaPredicted RBP12.25□□□□□ -0.45
SMAD1-211ENST00000512019 C22orf24Q9Y442 160 aa12.25□□□□□ -0.45
SMAD1-211ENST00000512019 KRTAP29-1A8MX34 341 aaPredicted RBP12.24□□□□□ -0.45
SMAD1-211ENST00000512019 IFITM1P13164 125 aa12.24□□□□□ -0.45
SMAD1-211ENST00000512019 MRPL55Q7Z7F7 128 aaKnown RBP12.24□□□□□ -0.45
SMAD1-211ENST00000512019 PKHD1L1Q86WI1 4243 aa12.23□□□□□ -0.45
SMAD1-211ENST00000512019 SRSF9Q13242 221 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMAD1-211ENST00000512019 SOSTDC1Q6X4U4 206 aa12.23□□□□□ -0.45
SMAD1-211ENST00000512019 PHF5AQ7RTV0 110 aaKnown RBP12.23□□□□□ -0.45
SMAD1-211ENST00000512019 Q8NDZ9 215 aa12.22□□□□□ -0.45
SMAD1-211ENST00000512019 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
SMAD1-211ENST00000512019 NDUFC2O95298 119 aa12.21□□□□□ -0.45
SMAD1-211ENST00000512019 KRTAP10-4P60372 401 aaPredicted RBP12.21□□□□□ -0.45
SMAD1-211ENST00000512019 HIGD1BQ9P298 99 aa12.21□□□□□ -0.45
SMAD1-211ENST00000512019 EIF4EBP3O60516 100 aaPredicted RBP12.2□□□□□ -0.46
SMAD1-211ENST00000512019 UBE2BP63146 152 aa12.2□□□□□ -0.46
SMAD1-211ENST00000512019 UQCR10Q9UDW1 63 aa12.19□□□□□ -0.46
SMAD1-211ENST00000512019 HMCN2Q8NDA2 5059 aa12.19□□□□□ -0.46
SMAD1-211ENST00000512019 M0R378 163 aa12.18□□□□□ -0.46
SMAD1-211ENST00000512019 NCR3O14931 201 aa12.18□□□□□ -0.46
SMAD1-211ENST00000512019 C2orf91Q6ZV80 131 aa12.18□□□□□ -0.46
SMAD1-211ENST00000512019 HIST1H4GQ99525 98 aa12.18□□□□□ -0.46
SMAD1-211ENST00000512019 C12orf57Q99622 126 aa12.18□□□□□ -0.46
SMAD1-211ENST00000512019 TRBV10-2A0A0K0K1G8 114 aa12.17□□□□□ -0.46
SMAD1-211ENST00000512019 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
SMAD1-211ENST00000512019 MUSTN1Q8IVN3 82 aa12.17□□□□□ -0.46
SMAD1-211ENST00000512019 LINC00167Q96N53 147 aa12.17□□□□□ -0.46
SMAD1-211ENST00000512019 PRR3P79522 188 aaKnown RBP12.16□□□□□ -0.46
SMAD1-211ENST00000512019 RPL37AP61513 92 aaKnown RBP12.15□□□□□ -0.46
SMAD1-211ENST00000512019 RPL37AP8A6NKH3 93 aa12.13□□□□□ -0.47
SMAD1-211ENST00000512019 LINC00518Q8N0U6 118 aa12.13□□□□□ -0.47
SMAD1-211ENST00000512019 IGKV2-28A0A075B6P5 120 aa12.12□□□□□ -0.47
SMAD1-211ENST00000512019 IGKV2D-28P01615 120 aa12.12□□□□□ -0.47
SMAD1-211ENST00000512019 TAL2Q16559 108 aa12.12□□□□□ -0.47
SMAD1-211ENST00000512019 PRO1933Q9H354 126 aa12.12□□□□□ -0.47
SMAD1-211ENST00000512019 IGLV1-50A0A075B6I6 118 aa12.11□□□□□ -0.47
SMAD1-211ENST00000512019 S100A7L2Q5SY68 101 aa12.11□□□□□ -0.47
SMAD1-211ENST00000512019 PSORS1C2Q9UIG4 136 aa12.11□□□□□ -0.47
SMAD1-211ENST00000512019 HNRNPA3P51991 378 aaKnown RBP12.1□□□□□ -0.47
SMAD1-211ENST00000512019 KRTAP11-1Q8IUC1 163 aa12.1□□□□□ -0.47
SMAD1-211ENST00000512019 TSTD3H0UI37 97 aa12.09□□□□□ -0.47
SMAD1-211ENST00000512019 DDTP30046 118 aa12.09□□□□□ -0.47
SMAD1-211ENST00000512019 TRBV10-3A0A0K0K1G6 114 aa12.08□□□□□ -0.48
SMAD1-211ENST00000512019 A4D1N5 150 aa12.08□□□□□ -0.48
SMAD1-211ENST00000512019 HSD52Q0P140 79 aa12.08□□□□□ -0.48
SMAD1-211ENST00000512019 IGLV6-57P01721 117 aa12.07□□□□□ -0.48
SMAD1-211ENST00000512019 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
SMAD1-211ENST00000512019 CBY1Q9Y3M2 126 aa12.07□□□□□ -0.48
SMAD1-211ENST00000512019 UBR4Q5T4S7 5183 aa12.07□□□□□ -0.48
SMAD1-211ENST00000512019 PRYO14603 147 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms