RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 TAL2Q16559 108 aa4.55□□□□□ -1.68
PDLIM5-215ENST00000511586 C6orf226Q5I0X4 101 aa4.55□□□□□ -1.68
PDLIM5-215ENST00000511586 UNQ6190/PRO20217Q6UXQ8 127 aa4.55□□□□□ -1.68
PDLIM5-215ENST00000511586 HIST1H4GQ99525 98 aa4.55□□□□□ -1.68
PDLIM5-215ENST00000511586 DNAH8Q96JB1 4490 aa4.54□□□□□ -1.68
PDLIM5-215ENST00000511586 PTTG1IPP53801 180 aa4.54□□□□□ -1.68
PDLIM5-215ENST00000511586 CKS1BP61024 79 aa4.54□□□□□ -1.68
PDLIM5-215ENST00000511586 GAGE2BQ13066 116 aa4.54□□□□□ -1.68
PDLIM5-215ENST00000511586 C10orf25Q5T742 122 aa4.54□□□□□ -1.68
PDLIM5-215ENST00000511586 Q8IZM0 81 aa4.54□□□□□ -1.68
PDLIM5-215ENST00000511586 PLAC8Q9NZF1 115 aa4.54□□□□□ -1.68
PDLIM5-215ENST00000511586 TOMM7Q9P0U1 55 aa4.54□□□□□ -1.68
PDLIM5-215ENST00000511586 NDUFA12Q9UI09 145 aa4.54□□□□□ -1.68
PDLIM5-215ENST00000511586 TRBV30A0A0K0K1B3 111 aa4.53□□□□□ -1.68
PDLIM5-215ENST00000511586 A0A1B0GV90 55 aa4.53□□□□□ -1.68
PDLIM5-215ENST00000511586 SMIM1B2RUZ4 78 aa4.53□□□□□ -1.68
PDLIM5-215ENST00000511586 TMEM238C9JI98 176 aa4.53□□□□□ -1.68
PDLIM5-215ENST00000511586 SRSF9Q13242 221 aaKnown RBP eCLIP4.53□□□□□ -1.68
PDLIM5-215ENST00000511586 C2orf82Q6UX34 121 aa4.53□□□□□ -1.68
PDLIM5-215ENST00000511586 CEND1Q8N111 149 aa4.53□□□□□ -1.68
PDLIM5-215ENST00000511586 C6orf48Q9UBA6 75 aa4.53□□□□□ -1.68
PDLIM5-215ENST00000511586 IGLV5-39A0A0G2JS06 123 aa4.52□□□□□ -1.69
PDLIM5-215ENST00000511586 TLX1NBP0CAT3 122 aa4.52□□□□□ -1.69
PDLIM5-215ENST00000511586 INAFM2P0DMQ5 153 aa4.52□□□□□ -1.69
PDLIM5-215ENST00000511586 CXCL5P42830 114 aa4.52□□□□□ -1.69
PDLIM5-215ENST00000511586 RPL18AQ02543 176 aaKnown RBP4.52□□□□□ -1.69
PDLIM5-215ENST00000511586 COX7B2Q8TF08 81 aa4.52□□□□□ -1.69
PDLIM5-215ENST00000511586 FAT1Q14517 4588 aa4.51□□□□□ -1.69
PDLIM5-215ENST00000511586 A0A0J9YXY3 114 aa4.51□□□□□ -1.69
PDLIM5-215ENST00000511586 FXYD2P54710 66 aa4.51□□□□□ -1.69
PDLIM5-215ENST00000511586 RPL37AP61513 92 aaKnown RBP4.51□□□□□ -1.69
PDLIM5-215ENST00000511586 Q6ZRP5 223 aa4.51□□□□□ -1.69
PDLIM5-215ENST00000511586 C7orf33Q8WU49 177 aa4.51□□□□□ -1.69
PDLIM5-215ENST00000511586 SPANXB1Q9NS25 103 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-215ENST00000511586 NHP2Q9NX24 153 aaKnown RBP4.51□□□□□ -1.69
PDLIM5-215ENST00000511586 A0A1W2PNN7 141 aa4.5□□□□□ -1.69
PDLIM5-215ENST00000511586 NDUFC2-KCTD14E9PQ53 114 aa4.5□□□□□ -1.69
PDLIM5-215ENST00000511586 SMIM13P0DJ93 91 aa4.5□□□□□ -1.69
PDLIM5-215ENST00000511586 GAGE2EQ4V326 116 aa4.5□□□□□ -1.69
PDLIM5-215ENST00000511586 C9orf116Q5BN46 136 aaPredicted RBP4.5□□□□□ -1.69
PDLIM5-215ENST00000511586 GAGE2DQ9UEU5 116 aa4.5□□□□□ -1.69
PDLIM5-215ENST00000511586 TIMM17BO60830 172 aa4.49□□□□□ -1.69
PDLIM5-215ENST00000511586 KRTAP10-4P60372 401 aaPredicted RBP4.49□□□□□ -1.69
PDLIM5-215ENST00000511586 HERV-K104P63124 156 aa4.49□□□□□ -1.69
PDLIM5-215ENST00000511586 RPL24P83731 157 aaKnown RBP4.49□□□□□ -1.69
PDLIM5-215ENST00000511586 MEIG1Q5JSS6 88 aa4.49□□□□□ -1.69
PDLIM5-215ENST00000511586 SFTA2Q6UW10 78 aa4.49□□□□□ -1.69
PDLIM5-215ENST00000511586 RAB37Q96AX2 223 aa4.49□□□□□ -1.69
PDLIM5-215ENST00000511586 K7ERJ3 54 aa4.48□□□□□ -1.69
PDLIM5-215ENST00000511586 TAX1BP3O14907 124 aa4.48□□□□□ -1.69
PDLIM5-215ENST00000511586 Q6ZVH6 145 aa4.48□□□□□ -1.69
PDLIM5-215ENST00000511586 COPS9Q8WXC6 57 aa4.48□□□□□ -1.69
PDLIM5-215ENST00000511586 ZNF625Q96I27 306 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-215ENST00000511586 SPANXDQ9BXN6 97 aa4.48□□□□□ -1.69
PDLIM5-215ENST00000511586 SPANXCQ9NY87 97 aa4.48□□□□□ -1.69
PDLIM5-215ENST00000511586 PCLOQ9Y6V0 5065 aa4.48□□□□□ -1.69
PDLIM5-215ENST00000511586 VAMP3Q15836 100 aa4.47□□□□□ -1.69
PDLIM5-215ENST00000511586 A0A1B0GWB2 263 aa4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 FAM168BA1KXE4 195 aa4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 C9orf118A6NHY6 69 aa4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 H3BUT2 72 aa4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 IFITM1P13164 125 aa4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 NPC2P61916 151 aa4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 C9orf129Q5T035 196 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 FAM19A5Q7Z5A7 132 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 LITAFQ99732 161 aa4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 ABCA13Q86UQ4 5058 aa4.46□□□□□ -1.7
PDLIM5-215ENST00000511586 A0A0U1RRA0 63 aa4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 A4D1N5 150 aa4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 PFN2P35080 140 aa4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 PCP4P48539 62 aa4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 PRR3P79522 188 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 COX17Q14061 63 aa4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 PHF5AQ7RTV0 110 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 MUSTN1Q8IVN3 82 aa4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 DAND5Q8N907 189 aa4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 NAA38Q9BRA0 125 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 XAGE1AQ9HD64 81 aa4.45□□□□□ -1.7
PDLIM5-215ENST00000511586 A0A0B4J2C4 111 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 A0A1W2PPM0 123 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 M0QXV9 152 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 FABP2P12104 132 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 LINC00158P58513 81 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 Q1RN00 199 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 ADAMTSL4-AS1Q5T5F5 129 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 LYRM7Q5U5X0 104 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 GTF2H5Q6ZYL4 71 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 KRTAP7-1Q8IUC3 87 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 ERG28Q9UKR5 140 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 VPS13BQ7Z7G8 4022 aa4.44□□□□□ -1.7
PDLIM5-215ENST00000511586 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-215ENST00000511586 UBE2BP63146 152 aa4.43□□□□□ -1.7
PDLIM5-215ENST00000511586 SERTAD4-AS1Q5TG53 156 aa4.43□□□□□ -1.7
PDLIM5-215ENST00000511586 LINC00308Q8TCZ7 52 aa4.43□□□□□ -1.7
PDLIM5-215ENST00000511586 PRO1854Q9UHT4 67 aa4.43□□□□□ -1.7
PDLIM5-215ENST00000511586 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
PDLIM5-215ENST00000511586 PLA2G2DQ9UNK4 145 aa4.43□□□□□ -1.7
PDLIM5-215ENST00000511586 C22orf24Q9Y442 160 aa4.43□□□□□ -1.7
PDLIM5-215ENST00000511586 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
PDLIM5-215ENST00000511586 H7C2G1 150 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms