RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 TP73-AS1Q9UF72 201 aa8.02□□□□□ -1.13
COL6A6-203ENST00000511332 UBE2BP63146 152 aa8.01□□□□□ -1.13
COL6A6-203ENST00000511332 LBHQ53QV2 105 aaPredicted RBP8.01□□□□□ -1.13
COL6A6-203ENST00000511332 KRTAP7-1Q8IUC3 87 aa8.01□□□□□ -1.13
COL6A6-203ENST00000511332 ATOH7Q8N100 152 aa8.01□□□□□ -1.13
COL6A6-203ENST00000511332 NKAPP1Q8N9T2 125 aa8.01□□□□□ -1.13
COL6A6-203ENST00000511332 IGLV5-37A0A075B6J1 123 aa8□□□□□ -1.13
COL6A6-203ENST00000511332 A0A0U1RRA0 63 aa8□□□□□ -1.13
COL6A6-203ENST00000511332 RPL24P83731 157 aaKnown RBP8□□□□□ -1.13
COL6A6-203ENST00000511332 C22orf24Q9Y442 160 aa8□□□□□ -1.13
COL6A6-203ENST00000511332 SRRM2Q9UQ35 2752 aaKnown RBP8□□□□□ -1.13
COL6A6-203ENST00000511332 MRPL55Q7Z7F7 128 aaKnown RBP7.99□□□□□ -1.13
COL6A6-203ENST00000511332 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
COL6A6-203ENST00000511332 ABCA13Q86UQ4 5058 aa7.98□□□□□ -1.13
COL6A6-203ENST00000511332 IGKV2D-26A0A0A0MRZ7 120 aa7.98□□□□□ -1.13
COL6A6-203ENST00000511332 ZNF815PA8K554 130 aa7.98□□□□□ -1.13
COL6A6-203ENST00000511332 HSBP1L1C9JCN9 74 aa7.98□□□□□ -1.13
COL6A6-203ENST00000511332 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
COL6A6-203ENST00000511332 A0A0J9YXY3 114 aa7.97□□□□□ -1.13
COL6A6-203ENST00000511332 ANKRD39Q53RE8 183 aa7.97□□□□□ -1.13
COL6A6-203ENST00000511332 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
COL6A6-203ENST00000511332 FAT1Q14517 4588 aa7.97□□□□□ -1.13
COL6A6-203ENST00000511332 SCGB1D1O95968 90 aa7.96□□□□□ -1.14
COL6A6-203ENST00000511332 VPREB1P12018 145 aa7.96□□□□□ -1.14
COL6A6-203ENST00000511332 MIEN1Q9BRT3 115 aa7.96□□□□□ -1.14
COL6A6-203ENST00000511332 TMA7Q9Y2S6 64 aaKnown RBP7.96□□□□□ -1.14
COL6A6-203ENST00000511332 TIMM17BO60830 172 aa7.95□□□□□ -1.14
COL6A6-203ENST00000511332 C1orf137Q5JT78 98 aa7.95□□□□□ -1.14
COL6A6-203ENST00000511332 BOD1L2Q8IYS8 172 aa7.95□□□□□ -1.14
COL6A6-203ENST00000511332 DAND5Q8N907 189 aa7.95□□□□□ -1.14
COL6A6-203ENST00000511332 LINC00167Q96N53 147 aa7.94□□□□□ -1.14
COL6A6-203ENST00000511332 TTTY13Q9BZ97 58 aa7.94□□□□□ -1.14
COL6A6-203ENST00000511332 LOC107984156A0A0G2JMH3 177 aa7.93□□□□□ -1.14
COL6A6-203ENST00000511332 GAGE10A6NGK3 116 aa7.93□□□□□ -1.14
COL6A6-203ENST00000511332 HNRNPA3P51991 378 aaKnown RBP7.93□□□□□ -1.14
COL6A6-203ENST00000511332 SCGB1D4Q6XE38 83 aa7.93□□□□□ -1.14
COL6A6-203ENST00000511332 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
COL6A6-203ENST00000511332 ARL17AQ8IVW1 177 aa7.93□□□□□ -1.14
COL6A6-203ENST00000511332 RPL37AP8A6NKH3 93 aa7.92□□□□□ -1.14
COL6A6-203ENST00000511332 TMEM238C9JI98 176 aa7.92□□□□□ -1.14
COL6A6-203ENST00000511332 Q8NDZ9 215 aa7.92□□□□□ -1.14
COL6A6-203ENST00000511332 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
COL6A6-203ENST00000511332 SPINK6Q6UWN8 80 aa7.91□□□□□ -1.14
COL6A6-203ENST00000511332 LITAFQ99732 161 aa7.91□□□□□ -1.14
COL6A6-203ENST00000511332 IGKV2-28A0A075B6P5 120 aa7.9□□□□□ -1.14
COL6A6-203ENST00000511332 M0R378 163 aa7.9□□□□□ -1.14
COL6A6-203ENST00000511332 NCR3O14931 201 aa7.9□□□□□ -1.14
COL6A6-203ENST00000511332 IGKV2D-28P01615 120 aa7.9□□□□□ -1.14
COL6A6-203ENST00000511332 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.14
COL6A6-203ENST00000511332 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
COL6A6-203ENST00000511332 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
COL6A6-203ENST00000511332 IGLV1-50A0A075B6I6 118 aa7.89□□□□□ -1.15
COL6A6-203ENST00000511332 NDUFC2O95298 119 aa7.89□□□□□ -1.15
COL6A6-203ENST00000511332 NPC2P61916 151 aa7.89□□□□□ -1.15
COL6A6-203ENST00000511332 COPS9Q8WXC6 57 aa7.89□□□□□ -1.15
COL6A6-203ENST00000511332 FLG2Q5D862 2391 aaPredicted RBP7.89□□□□□ -1.15
COL6A6-203ENST00000511332 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
COL6A6-203ENST00000511332 TRBV10-2A0A0K0K1G8 114 aa7.88□□□□□ -1.15
COL6A6-203ENST00000511332 BCE1O60756 84 aa7.88□□□□□ -1.15
COL6A6-203ENST00000511332 JOSD1Q15040 202 aaPredicted RBP7.88□□□□□ -1.15
COL6A6-203ENST00000511332 LINC00308Q8TCZ7 52 aa7.88□□□□□ -1.15
COL6A6-203ENST00000511332 SPANXDQ9BXN6 97 aa7.88□□□□□ -1.15
COL6A6-203ENST00000511332 SPANXCQ9NY87 97 aa7.88□□□□□ -1.15
COL6A6-203ENST00000511332 S100A12P80511 92 aa7.87□□□□□ -1.15
COL6A6-203ENST00000511332 SRSF9Q13242 221 aaKnown RBP eCLIP7.87□□□□□ -1.15
COL6A6-203ENST00000511332 SOSTDC1Q6X4U4 206 aa7.87□□□□□ -1.15
COL6A6-203ENST00000511332 Q6ZVH6 145 aa7.87□□□□□ -1.15
COL6A6-203ENST00000511332 DIRC1Q969H9 104 aa7.87□□□□□ -1.15
COL6A6-203ENST00000511332 REG3GQ6UW15 175 aa7.86□□□□□ -1.15
COL6A6-203ENST00000511332 VAMP8Q9BV40 100 aa7.86□□□□□ -1.15
COL6A6-203ENST00000511332 TMEM126AQ9H061 195 aa7.86□□□□□ -1.15
COL6A6-203ENST00000511332 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
COL6A6-203ENST00000511332 PRYO14603 147 aa7.85□□□□□ -1.15
COL6A6-203ENST00000511332 OXTP01178 125 aa7.85□□□□□ -1.15
COL6A6-203ENST00000511332 IFITM1P13164 125 aa7.85□□□□□ -1.15
COL6A6-203ENST00000511332 RPL28P46779 137 aaKnown RBP7.85□□□□□ -1.15
COL6A6-203ENST00000511332 PPDPFQ9H3Y8 114 aa7.85□□□□□ -1.15
COL6A6-203ENST00000511332 H0Y9J4 135 aa7.84□□□□□ -1.15
COL6A6-203ENST00000511332 ZNF861PO60384 105 aa7.84□□□□□ -1.15
COL6A6-203ENST00000511332 UBE2AP49459 152 aa7.84□□□□□ -1.15
COL6A6-203ENST00000511332 S100A7L2Q5SY68 101 aa7.84□□□□□ -1.15
COL6A6-203ENST00000511332 PAM16Q9Y3D7 125 aa7.84□□□□□ -1.15
COL6A6-203ENST00000511332 TRBV10-3A0A0K0K1G6 114 aa7.83□□□□□ -1.16
COL6A6-203ENST00000511332 EIF4EBP3O60516 100 aaPredicted RBP7.83□□□□□ -1.16
COL6A6-203ENST00000511332 COX8AP10176 69 aa7.83□□□□□ -1.16
COL6A6-203ENST00000511332 DDTP30046 118 aa7.83□□□□□ -1.16
COL6A6-203ENST00000511332 SPATA45Q537H7 98 aa7.83□□□□□ -1.16
COL6A6-203ENST00000511332 KCNQ1DNQ9H478 68 aa7.83□□□□□ -1.16
COL6A6-203ENST00000511332 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
COL6A6-203ENST00000511332 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
COL6A6-203ENST00000511332 CBY1Q9Y3M2 126 aa7.82□□□□□ -1.16
COL6A6-203ENST00000511332 J3QL48 77 aa7.81□□□□□ -1.16
COL6A6-203ENST00000511332 DLEU1O43261 78 aa7.81□□□□□ -1.16
COL6A6-203ENST00000511332 IGLV6-57P01721 117 aa7.81□□□□□ -1.16
COL6A6-203ENST00000511332 PYY3Q5JQD4 70 aa7.81□□□□□ -1.16
COL6A6-203ENST00000511332 LINC00518Q8N0U6 118 aa7.81□□□□□ -1.16
COL6A6-203ENST00000511332 KRTAP13-1Q8IUC0 172 aa7.8□□□□□ -1.16
COL6A6-203ENST00000511332 TRAV23DV6A0A075B6W5 121 aa7.79□□□□□ -1.16
COL6A6-203ENST00000511332 ETDCA0A1B0GVM5 59 aa7.79□□□□□ -1.16
COL6A6-203ENST00000511332 SPRR1AP35321 89 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms