RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 C20orf202A1L168 122 aa5.37□□□□□ -1.55
SNCA-211ENST00000508895 J3QQQ9 107 aa5.37□□□□□ -1.55
SNCA-211ENST00000508895 PFN2P35080 140 aa5.37□□□□□ -1.55
SNCA-211ENST00000508895 SERTAD4-AS1Q5TG53 156 aa5.37□□□□□ -1.55
SNCA-211ENST00000508895 ATOH7Q8N100 152 aa5.37□□□□□ -1.55
SNCA-211ENST00000508895 IGKV2D-26A0A0A0MRZ7 120 aa5.36□□□□□ -1.55
SNCA-211ENST00000508895 PRR3P79522 188 aaKnown RBP5.36□□□□□ -1.55
SNCA-211ENST00000508895 KRTAP9-2Q9BYQ4 174 aa5.36□□□□□ -1.55
SNCA-211ENST00000508895 MYMXA0A1B0GTQ4 84 aa5.35□□□□□ -1.55
SNCA-211ENST00000508895 M0QXV9 152 aa5.35□□□□□ -1.55
SNCA-211ENST00000508895 LGALS3P17931 250 aaKnown RBP5.35□□□□□ -1.55
SNCA-211ENST00000508895 HERV-K104P63124 156 aa5.35□□□□□ -1.55
SNCA-211ENST00000508895 COX17Q14061 63 aa5.35□□□□□ -1.55
SNCA-211ENST00000508895 ANKRD39Q53RE8 183 aa5.35□□□□□ -1.55
SNCA-211ENST00000508895 PHF5AQ7RTV0 110 aaKnown RBP5.35□□□□□ -1.55
SNCA-211ENST00000508895 TTTY13Q9BZ97 58 aa5.35□□□□□ -1.55
SNCA-211ENST00000508895 SND1-IT1Q9HBX3 110 aa5.35□□□□□ -1.55
SNCA-211ENST00000508895 TMA7Q9Y2S6 64 aaKnown RBP5.35□□□□□ -1.55
SNCA-211ENST00000508895 A0A0U1RRA0 63 aa5.34□□□□□ -1.55
SNCA-211ENST00000508895 OXTP01178 125 aa5.34□□□□□ -1.55
SNCA-211ENST00000508895 SMIM13P0DJ93 91 aa5.34□□□□□ -1.55
SNCA-211ENST00000508895 NMUP48645 174 aa5.34□□□□□ -1.55
SNCA-211ENST00000508895 MEIG1Q5JSS6 88 aa5.34□□□□□ -1.55
SNCA-211ENST00000508895 Q8NDZ9 215 aa5.34□□□□□ -1.55
SNCA-211ENST00000508895 SRSF9Q13242 221 aaKnown RBP eCLIP5.33□□□□□ -1.56
SNCA-211ENST00000508895 C7orf33Q8WU49 177 aa5.33□□□□□ -1.56
SNCA-211ENST00000508895 PLA2G2DQ9UNK4 145 aa5.33□□□□□ -1.56
SNCA-211ENST00000508895 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
SNCA-211ENST00000508895 A0A0J9YXY3 114 aa5.32□□□□□ -1.56
SNCA-211ENST00000508895 VPREB1P12018 145 aa5.32□□□□□ -1.56
SNCA-211ENST00000508895 AKR1D1P51857 326 aa5.32□□□□□ -1.56
SNCA-211ENST00000508895 LINC00158P58513 81 aa5.32□□□□□ -1.56
SNCA-211ENST00000508895 MIR7-3HGQ8N6C7 128 aa5.32□□□□□ -1.56
SNCA-211ENST00000508895 DAND5Q8N907 189 aa5.32□□□□□ -1.56
SNCA-211ENST00000508895 ZNF815PA8K554 130 aa5.31□□□□□ -1.56
SNCA-211ENST00000508895 LITAFQ99732 161 aa5.31□□□□□ -1.56
SNCA-211ENST00000508895 TP73-AS1Q9UF72 201 aa5.31□□□□□ -1.56
SNCA-211ENST00000508895 C22orf24Q9Y442 160 aa5.31□□□□□ -1.56
SNCA-211ENST00000508895 MRPL55Q7Z7F7 128 aaKnown RBP5.3□□□□□ -1.56
SNCA-211ENST00000508895 PCP2Q8IVA1 136 aa5.3□□□□□ -1.56
SNCA-211ENST00000508895 PSORS1C2Q9UIG4 136 aa5.3□□□□□ -1.56
SNCA-211ENST00000508895 LINC00587B1AMM8 73 aa5.29□□□□□ -1.56
SNCA-211ENST00000508895 EIF4EBP3O60516 100 aaPredicted RBP5.29□□□□□ -1.56
SNCA-211ENST00000508895 SCGB1D1O95968 90 aa5.29□□□□□ -1.56
SNCA-211ENST00000508895 ADAMTSL4-AS1Q5T5F5 129 aa5.29□□□□□ -1.56
SNCA-211ENST00000508895 SOSTDC1Q6X4U4 206 aa5.29□□□□□ -1.56
SNCA-211ENST00000508895 LOC107984156A0A0G2JMH3 177 aa5.28□□□□□ -1.56
SNCA-211ENST00000508895 GAGE10A6NGK3 116 aa5.28□□□□□ -1.56
SNCA-211ENST00000508895 LCE2BO14633 110 aa5.28□□□□□ -1.56
SNCA-211ENST00000508895 UBE2BP63146 152 aa5.28□□□□□ -1.56
SNCA-211ENST00000508895 ARL17AQ8IVW1 177 aa5.28□□□□□ -1.56
SNCA-211ENST00000508895 NKAPP1Q8N9T2 125 aa5.28□□□□□ -1.56
SNCA-211ENST00000508895 LINC00167Q96N53 147 aa5.28□□□□□ -1.56
SNCA-211ENST00000508895 LRP2P98164 4655 aa5.27□□□□□ -1.57
SNCA-211ENST00000508895 TIMM17BO60830 172 aa5.27□□□□□ -1.57
SNCA-211ENST00000508895 KRTAP10-8P60410 259 aa5.27□□□□□ -1.57
SNCA-211ENST00000508895 NPC2P61916 151 aa5.27□□□□□ -1.57
SNCA-211ENST00000508895 JOSD1Q15040 202 aaPredicted RBP5.27□□□□□ -1.57
SNCA-211ENST00000508895 C1orf137Q5JT78 98 aa5.27□□□□□ -1.57
SNCA-211ENST00000508895 BOD1L2Q8IYS8 172 aa5.27□□□□□ -1.57
SNCA-211ENST00000508895 LINC01600Q96MT4 127 aa5.27□□□□□ -1.57
SNCA-211ENST00000508895 RPL37AP8A6NKH3 93 aa5.26□□□□□ -1.57
SNCA-211ENST00000508895 HSBP1L1C9JCN9 74 aa5.26□□□□□ -1.57
SNCA-211ENST00000508895 NCR3O14931 201 aa5.26□□□□□ -1.57
SNCA-211ENST00000508895 RPL24P83731 157 aaKnown RBP5.26□□□□□ -1.57
SNCA-211ENST00000508895 LBHQ53QV2 105 aaPredicted RBP5.26□□□□□ -1.57
SNCA-211ENST00000508895 IGKV2-28A0A075B6P5 120 aa5.25□□□□□ -1.57
SNCA-211ENST00000508895 IGKV2D-28P01615 120 aa5.25□□□□□ -1.57
SNCA-211ENST00000508895 PYY3Q5JQD4 70 aa5.25□□□□□ -1.57
SNCA-211ENST00000508895 SPINK6Q6UWN8 80 aa5.25□□□□□ -1.57
SNCA-211ENST00000508895 SCGB1D4Q6XE38 83 aa5.25□□□□□ -1.57
SNCA-211ENST00000508895 MIEN1Q9BRT3 115 aa5.25□□□□□ -1.57
SNCA-211ENST00000508895 SPANXDQ9BXN6 97 aa5.25□□□□□ -1.57
SNCA-211ENST00000508895 SPANXCQ9NY87 97 aa5.25□□□□□ -1.57
SNCA-211ENST00000508895 IGLV1-50A0A075B6I6 118 aa5.24□□□□□ -1.57
SNCA-211ENST00000508895 TMEM238C9JI98 176 aa5.24□□□□□ -1.57
SNCA-211ENST00000508895 IGLV7-43P04211 117 aa5.24□□□□□ -1.57
SNCA-211ENST00000508895 LINC00308Q8TCZ7 52 aa5.24□□□□□ -1.57
SNCA-211ENST00000508895 PAM16Q9Y3D7 125 aa5.24□□□□□ -1.57
SNCA-211ENST00000508895 TRBV10-2A0A0K0K1G8 114 aa5.23□□□□□ -1.57
SNCA-211ENST00000508895 M0R378 163 aa5.23□□□□□ -1.57
SNCA-211ENST00000508895 NDUFC2O95298 119 aa5.23□□□□□ -1.57
SNCA-211ENST00000508895 COX8AP10176 69 aa5.23□□□□□ -1.57
SNCA-211ENST00000508895 SPATA45Q537H7 98 aa5.23□□□□□ -1.57
SNCA-211ENST00000508895 VAMP8Q9BV40 100 aa5.23□□□□□ -1.57
SNCA-211ENST00000508895 SPANXB1Q9NS25 103 aaPredicted RBP5.23□□□□□ -1.57
SNCA-211ENST00000508895 TRBV10-3A0A0K0K1G6 114 aa5.22□□□□□ -1.57
SNCA-211ENST00000508895 BCE1O60756 84 aa5.22□□□□□ -1.57
SNCA-211ENST00000508895 KRTAP1-4P0C5Y4 121 aa5.22□□□□□ -1.57
SNCA-211ENST00000508895 KRTAP13-1Q8IUC0 172 aa5.22□□□□□ -1.57
SNCA-211ENST00000508895 TMEM126AQ9H061 195 aa5.22□□□□□ -1.57
SNCA-211ENST00000508895 PRYO14603 147 aa5.21□□□□□ -1.58
SNCA-211ENST00000508895 PPDPFQ9H3Y8 114 aa5.21□□□□□ -1.58
SNCA-211ENST00000508895 LPAP08519 4548 aa5.2□□□□□ -1.58
SNCA-211ENST00000508895 H0Y9J4 135 aa5.2□□□□□ -1.58
SNCA-211ENST00000508895 DLEU1O43261 78 aa5.2□□□□□ -1.58
SNCA-211ENST00000508895 IGLV6-57P01721 117 aa5.2□□□□□ -1.58
SNCA-211ENST00000508895 PRLHP81277 87 aa5.2□□□□□ -1.58
SNCA-211ENST00000508895 REG3GQ6UW15 175 aa5.2□□□□□ -1.58
SNCA-211ENST00000508895 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms