RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 C22orf24Q9Y442 160 aa7.82□□□□□ -1.16
PRPF40B-203ENST00000508736 ORMDL1Q9P0S3 153 aa7.81□□□□□ -1.16
PRPF40B-203ENST00000508736 DEFB131BA0A096LNP1 70 aa7.81□□□□□ -1.16
PRPF40B-203ENST00000508736 TRBV7-7A0A0K0K1E9 115 aa7.81□□□□□ -1.16
PRPF40B-203ENST00000508736 NDUFV3P56181 108 aaKnown RBP7.81□□□□□ -1.16
PRPF40B-203ENST00000508736 NANOS2P60321 138 aaKnown RBP7.8□□□□□ -1.16
PRPF40B-203ENST00000508736 LINC00643Q86TS7 51 aa7.8□□□□□ -1.16
PRPF40B-203ENST00000508736 GAGE2AQ6NT46 116 aa7.79□□□□□ -1.16
PRPF40B-203ENST00000508736 IMUPQ9GZP8 106 aa7.79□□□□□ -1.16
PRPF40B-203ENST00000508736 TENM3Q9P273 2699 aa7.79□□□□□ -1.16
PRPF40B-203ENST00000508736 C9orf116Q5BN46 136 aaPredicted RBP7.79□□□□□ -1.16
PRPF40B-203ENST00000508736 S100A7L2Q5SY68 101 aa7.79□□□□□ -1.16
PRPF40B-203ENST00000508736 ENHOQ6UWT2 76 aa7.79□□□□□ -1.16
PRPF40B-203ENST00000508736 B9D2Q9BPU9 175 aa7.79□□□□□ -1.16
PRPF40B-203ENST00000508736 GVQW2A0A096LPI5 108 aaPredicted RBP7.78□□□□□ -1.16
PRPF40B-203ENST00000508736 TRAV10A0A0B4J240 114 aa7.78□□□□□ -1.16
PRPF40B-203ENST00000508736 UNQ6190/PRO20217Q6UXQ8 127 aa7.78□□□□□ -1.16
PRPF40B-203ENST00000508736 OBSCN-AS1Q96MR7 158 aa7.78□□□□□ -1.16
PRPF40B-203ENST00000508736 LINC00167Q96N53 147 aa7.78□□□□□ -1.16
PRPF40B-203ENST00000508736 NCR3O14931 201 aa7.77□□□□□ -1.17
PRPF40B-203ENST00000508736 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
PRPF40B-203ENST00000508736 ESRGQ1W209 222 aa7.77□□□□□ -1.17
PRPF40B-203ENST00000508736 SDIM1Q6ZPB5 146 aa7.77□□□□□ -1.17
PRPF40B-203ENST00000508736 WFDC10BQ8IUB3 73 aa7.77□□□□□ -1.17
PRPF40B-203ENST00000508736 C6orf223Q8N319 242 aa7.77□□□□□ -1.17
PRPF40B-203ENST00000508736 Q8N814 137 aa7.77□□□□□ -1.17
PRPF40B-203ENST00000508736 HUWE1Q7Z6Z7 4374 aaKnown RBP7.76□□□□□ -1.17
PRPF40B-203ENST00000508736 FBN3Q75N90 2809 aa7.76□□□□□ -1.17
PRPF40B-203ENST00000508736 C10orf25Q5T742 122 aa7.76□□□□□ -1.17
PRPF40B-203ENST00000508736 LINC01556Q5JQF7 62 aa7.75□□□□□ -1.17
PRPF40B-203ENST00000508736 SMCR5Q8TEV8 140 aa7.75□□□□□ -1.17
PRPF40B-203ENST00000508736 C14orf132Q9NPU4 83 aa7.75□□□□□ -1.17
PRPF40B-203ENST00000508736 JMJD7-PLA2G4BH0Y9G9 81 aa7.75□□□□□ -1.17
PRPF40B-203ENST00000508736 TMEM256-PLSCR3K7ERE1 68 aa7.75□□□□□ -1.17
PRPF40B-203ENST00000508736 SLPIP03973 132 aa7.75□□□□□ -1.17
PRPF40B-203ENST00000508736 COL7A1Q02388 2944 aa7.74□□□□□ -1.17
PRPF40B-203ENST00000508736 ZNF561-AS1K7EIQ3 104 aa7.74□□□□□ -1.17
PRPF40B-203ENST00000508736 C6orf99Q4VX62 202 aa7.74□□□□□ -1.17
PRPF40B-203ENST00000508736 NHLRC4P0CG21 123 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-203ENST00000508736 LINC00526Q96FQ7 95 aa7.73□□□□□ -1.17
PRPF40B-203ENST00000508736 IGLV6-57P01721 117 aa7.72□□□□□ -1.17
PRPF40B-203ENST00000508736 C6orf48Q9UBA6 75 aa7.72□□□□□ -1.17
PRPF40B-203ENST00000508736 DNAH10OSP0CZ25 163 aa7.71□□□□□ -1.18
PRPF40B-203ENST00000508736 C9orf129Q5T035 196 aaKnown RBP7.71□□□□□ -1.18
PRPF40B-203ENST00000508736 KRTAP26-1Q6PEX3 210 aa7.71□□□□□ -1.18
PRPF40B-203ENST00000508736 LINC00575Q6W349 94 aa7.71□□□□□ -1.18
PRPF40B-203ENST00000508736 Q8NDZ9 215 aa7.71□□□□□ -1.18
PRPF40B-203ENST00000508736 CAMK2N2Q96S95 79 aa7.71□□□□□ -1.18
PRPF40B-203ENST00000508736 H3BQ85 93 aa7.7□□□□□ -1.18
PRPF40B-203ENST00000508736 RPL18AQ02543 176 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-203ENST00000508736 PRKDCP78527 4128 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-203ENST00000508736 C2orf48Q96LS8 159 aa7.7□□□□□ -1.18
PRPF40B-203ENST00000508736 C1orf43Q9BWL3 253 aa7.7□□□□□ -1.18
PRPF40B-203ENST00000508736 DNAH9Q9NYC9 4486 aa7.7□□□□□ -1.18
PRPF40B-203ENST00000508736 FAM236AA0A1B0GUQ0 79 aa7.69□□□□□ -1.18
PRPF40B-203ENST00000508736 FAM236BA0A1B0GV22 79 aa7.69□□□□□ -1.18
PRPF40B-203ENST00000508736 hADV29S1A0JD25 119 aa7.69□□□□□ -1.18
PRPF40B-203ENST00000508736 F8WDY8 70 aa7.69□□□□□ -1.18
PRPF40B-203ENST00000508736 CCKP06307 115 aa7.69□□□□□ -1.18
PRPF40B-203ENST00000508736 HIGD2BQ4VC39 106 aa7.68□□□□□ -1.18
PRPF40B-203ENST00000508736 TRAV23DV6A0A075B6W5 121 aa7.68□□□□□ -1.18
PRPF40B-203ENST00000508736 Q6JHZ5 121 aa7.68□□□□□ -1.18
PRPF40B-203ENST00000508736 DIRC1Q969H9 104 aa7.68□□□□□ -1.18
PRPF40B-203ENST00000508736 UPK3BQ9BT76 320 aa7.67□□□□□ -1.18
PRPF40B-203ENST00000508736 XAGE1AQ9HD64 81 aa7.67□□□□□ -1.18
PRPF40B-203ENST00000508736 TGP01266 2768 aa7.67□□□□□ -1.18
PRPF40B-203ENST00000508736 TRBV10-3A0A0K0K1G6 114 aa7.66□□□□□ -1.18
PRPF40B-203ENST00000508736 GHRHP01286 108 aa7.66□□□□□ -1.18
PRPF40B-203ENST00000508736 C15orf56Q8N910 161 aa7.66□□□□□ -1.18
PRPF40B-203ENST00000508736 LINC00588Q9Y4M8 146 aa7.66□□□□□ -1.18
PRPF40B-203ENST00000508736 NDUFC2-KCTD14E9PQ53 114 aa7.66□□□□□ -1.18
PRPF40B-203ENST00000508736 LINC00846Q9NV44 126 aa7.66□□□□□ -1.18
PRPF40B-203ENST00000508736 TRBV7-6A0A0J9YX20 115 aa7.65□□□□□ -1.18
PRPF40B-203ENST00000508736 Q6ZRU5 148 aa7.65□□□□□ -1.18
PRPF40B-203ENST00000508736 IGKV2D-24A0A075B6R9 120 aa7.64□□□□□ -1.19
PRPF40B-203ENST00000508736 CCDC179H3BU77 68 aa7.64□□□□□ -1.19
PRPF40B-203ENST00000508736 M0R378 163 aa7.64□□□□□ -1.19
PRPF40B-203ENST00000508736 STAB2Q8WWQ8 2551 aa7.64□□□□□ -1.19
PRPF40B-203ENST00000508736 ZNF73O43830 326 aaPredicted RBP7.64□□□□□ -1.19
PRPF40B-203ENST00000508736 VPREB1P12018 145 aa7.64□□□□□ -1.19
PRPF40B-203ENST00000508736 COX7BP24311 80 aa7.64□□□□□ -1.19
PRPF40B-203ENST00000508736 ATP5EP2Q5VTU8 51 aa7.64□□□□□ -1.19
PRPF40B-203ENST00000508736 B5MCH6 92 aa7.63□□□□□ -1.19
PRPF40B-203ENST00000508736 RBM3P98179 157 aaKnown RBP7.63□□□□□ -1.19
PRPF40B-203ENST00000508736 LAMTOR3Q9UHA4 124 aa7.63□□□□□ -1.19
PRPF40B-203ENST00000508736 LOC110117498A0A087WWA1 95 aa7.62□□□□□ -1.19
PRPF40B-203ENST00000508736 PDE6GP18545 87 aa7.62□□□□□ -1.19
PRPF40B-203ENST00000508736 ELOF1P60002 83 aaKnown RBP7.62□□□□□ -1.19
PRPF40B-203ENST00000508736 SYCNQ0VAF6 134 aa7.62□□□□□ -1.19
PRPF40B-203ENST00000508736 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.62□□□□□ -1.19
PRPF40B-203ENST00000508736 Q6ZQY7 126 aa7.62□□□□□ -1.19
PRPF40B-203ENST00000508736 IGKV3D-7A0A0C4DH55 119 aa7.61□□□□□ -1.19
PRPF40B-203ENST00000508736 ATOX1O00244 68 aa7.61□□□□□ -1.19
PRPF40B-203ENST00000508736 DNAH1Q9P2D7 4330 aa7.6□□□□□ -1.19
PRPF40B-203ENST00000508736 RMI2Q96E14 147 aa7.6□□□□□ -1.19
PRPF40B-203ENST00000508736 UBL5Q9BZL1 73 aa7.6□□□□□ -1.19
PRPF40B-203ENST00000508736 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
PRPF40B-203ENST00000508736 DSCR8Q96T75 97 aa7.6□□□□□ -1.19
PRPF40B-203ENST00000508736 Q6ZQT0 140 aa7.59□□□□□ -1.19
PRPF40B-203ENST00000508736 DYNC2H1Q8NCM8 4307 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms