RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 ARL17AQ8IVW1 177 aa5.54□□□□□ -1.52
USP46-207ENST00000508499 BOD1L2Q8IYS8 172 aa5.54□□□□□ -1.52
USP46-207ENST00000508499 A0A0J9YXY3 114 aa5.53□□□□□ -1.52
USP46-207ENST00000508499 ZNF815PA8K554 130 aa5.53□□□□□ -1.52
USP46-207ENST00000508499 PTTG1IPP53801 180 aa5.53□□□□□ -1.52
USP46-207ENST00000508499 SPATA45Q537H7 98 aa5.52□□□□□ -1.53
USP46-207ENST00000508499 Q6ZRP5 223 aa5.52□□□□□ -1.53
USP46-207ENST00000508499 Q6ZVH6 145 aa5.52□□□□□ -1.53
USP46-207ENST00000508499 PCP2Q8IVA1 136 aa5.52□□□□□ -1.53
USP46-207ENST00000508499 LITAFQ99732 161 aa5.52□□□□□ -1.53
USP46-207ENST00000508499 PLA2G2DQ9UNK4 145 aa5.52□□□□□ -1.53
USP46-207ENST00000508499 DNAH11Q96DT5 4516 aa5.51□□□□□ -1.53
USP46-207ENST00000508499 C9orf116Q5BN46 136 aaPredicted RBP5.51□□□□□ -1.53
USP46-207ENST00000508499 SPACA4Q8TDM5 124 aa5.51□□□□□ -1.53
USP46-207ENST00000508499 PAM16Q9Y3D7 125 aa5.51□□□□□ -1.53
USP46-207ENST00000508499 A0A096LNI7 61 aa5.5□□□□□ -1.53
USP46-207ENST00000508499 KRTAP10-1P60331 282 aa5.5□□□□□ -1.53
USP46-207ENST00000508499 MEIG1Q5JSS6 88 aa5.5□□□□□ -1.53
USP46-207ENST00000508499 SPANXDQ9BXN6 97 aa5.5□□□□□ -1.53
USP46-207ENST00000508499 TTTY13Q9BZ97 58 aa5.5□□□□□ -1.53
USP46-207ENST00000508499 SPANXB1Q9NS25 103 aaPredicted RBP5.5□□□□□ -1.53
USP46-207ENST00000508499 SPANXCQ9NY87 97 aa5.5□□□□□ -1.53
USP46-207ENST00000508499 HIGD1BQ9P298 99 aa5.5□□□□□ -1.53
USP46-207ENST00000508499 TMEM238C9JI98 176 aa5.49□□□□□ -1.53
USP46-207ENST00000508499 PKHD1P08F94 4074 aa5.49□□□□□ -1.53
USP46-207ENST00000508499 SMIM13P0DJ93 91 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 IFITM1P13164 125 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 PFN2P35080 140 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 LINC00158P58513 81 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 RPL18AQ02543 176 aaKnown RBP5.48□□□□□ -1.53
USP46-207ENST00000508499 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
USP46-207ENST00000508499 SLC25A34Q6PIV7 304 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 SCGB1D4Q6XE38 83 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 COPS9Q8WXC6 57 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 SND1-IT1Q9HBX3 110 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 PLAC8Q9NZF1 115 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 CDK2AP2O75956 126 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 NDUFC2O95298 119 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 FUSP35637 526 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP46-207ENST00000508499 LINC01620Q4KN68 170 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 ADAMTSL4-AS1Q5T5F5 129 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 CDIP1Q9H305 208 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 TP73-AS1Q9UF72 201 aa5.48□□□□□ -1.53
USP46-207ENST00000508499 PCP4L1A6NKN8 68 aa5.47□□□□□ -1.53
USP46-207ENST00000508499 PANO1I0J062 215 aa5.47□□□□□ -1.53
USP46-207ENST00000508499 GAGE2BQ13066 116 aa5.47□□□□□ -1.53
USP46-207ENST00000508499 C14orf144Q96I85 54 aa5.47□□□□□ -1.53
USP46-207ENST00000508499 UQCR10Q9UDW1 63 aa5.47□□□□□ -1.53
USP46-207ENST00000508499 TAL2Q16559 108 aa5.46□□□□□ -1.54
USP46-207ENST00000508499 GAGE2EQ4V326 116 aa5.46□□□□□ -1.54
USP46-207ENST00000508499 C2orf91Q6ZV80 131 aa5.46□□□□□ -1.54
USP46-207ENST00000508499 FAM30AQ9NZY2 134 aa5.46□□□□□ -1.54
USP46-207ENST00000508499 GAGE2DQ9UEU5 116 aa5.46□□□□□ -1.54
USP46-207ENST00000508499 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
USP46-207ENST00000508499 A0A087WYN8 130 aa5.45□□□□□ -1.54
USP46-207ENST00000508499 IGKV2-24A0A0C4DH68 120 aa5.45□□□□□ -1.54
USP46-207ENST00000508499 TRBV10-2A0A0K0K1G8 114 aa5.45□□□□□ -1.54
USP46-207ENST00000508499 CHTF8P0CG12 524 aa5.45□□□□□ -1.54
USP46-207ENST00000508499 RPL24P83731 157 aaKnown RBP5.45□□□□□ -1.54
USP46-207ENST00000508499 KRTAP7-1Q8IUC3 87 aa5.45□□□□□ -1.54
USP46-207ENST00000508499 LINC00308Q8TCZ7 52 aa5.45□□□□□ -1.54
USP46-207ENST00000508499 XAGE1AQ9HD64 81 aa5.45□□□□□ -1.54
USP46-207ENST00000508499 VPREB1P12018 145 aa5.44□□□□□ -1.54
USP46-207ENST00000508499 XGP55808 180 aa5.44□□□□□ -1.54
USP46-207ENST00000508499 SOSTDC1Q6X4U4 206 aa5.44□□□□□ -1.54
USP46-207ENST00000508499 SCXQ7RTU7 201 aa5.44□□□□□ -1.54
USP46-207ENST00000508499 CIRBP-AS1Q8TBR5 109 aa5.44□□□□□ -1.54
USP46-207ENST00000508499 MIEN1Q9BRT3 115 aa5.44□□□□□ -1.54
USP46-207ENST00000508499 A0A1W2PNN7 141 aa5.43□□□□□ -1.54
USP46-207ENST00000508499 DAND5Q8N907 189 aa5.43□□□□□ -1.54
USP46-207ENST00000508499 A0A0U1RRA0 63 aa5.42□□□□□ -1.54
USP46-207ENST00000508499 TSTD3H0UI37 97 aa5.42□□□□□ -1.54
USP46-207ENST00000508499 SRSF9Q13242 221 aaKnown RBP eCLIP5.42□□□□□ -1.54
USP46-207ENST00000508499 PRO1933Q9H354 126 aa5.42□□□□□ -1.54
USP46-207ENST00000508499 FAM168BA1KXE4 195 aa5.41□□□□□ -1.54
USP46-207ENST00000508499 SEC61GP60059 68 aa5.41□□□□□ -1.54
USP46-207ENST00000508499 VAMP3Q15836 100 aa5.41□□□□□ -1.54
USP46-207ENST00000508499 LBHQ53QV2 105 aaPredicted RBP5.41□□□□□ -1.54
USP46-207ENST00000508499 SERTAD4-AS1Q5TG53 156 aa5.41□□□□□ -1.54
USP46-207ENST00000508499 MRPL55Q7Z7F7 128 aaKnown RBP5.41□□□□□ -1.54
USP46-207ENST00000508499 Q8NDZ9 215 aa5.41□□□□□ -1.54
USP46-207ENST00000508499 C22orf24Q9Y442 160 aa5.41□□□□□ -1.54
USP46-207ENST00000508499 M0QXV9 152 aa5.4□□□□□ -1.54
USP46-207ENST00000508499 M0R378 163 aa5.4□□□□□ -1.54
USP46-207ENST00000508499 MUSTN1Q8IVN3 82 aa5.4□□□□□ -1.54
USP46-207ENST00000508499 HIST1H4GQ99525 98 aa5.4□□□□□ -1.54
USP46-207ENST00000508499 HSD52Q0P140 79 aa5.4□□□□□ -1.55
USP46-207ENST00000508499 FAM19A5Q7Z5A7 132 aaPredicted RBP5.4□□□□□ -1.55
USP46-207ENST00000508499 CEND1Q8N111 149 aa5.4□□□□□ -1.55
USP46-207ENST00000508499 NKAPP1Q8N9T2 125 aa5.4□□□□□ -1.55
USP46-207ENST00000508499 DPH3Q96FX2 82 aa5.4□□□□□ -1.55
USP46-207ENST00000508499 LRP1BQ9NZR2 4599 aa5.39□□□□□ -1.55
USP46-207ENST00000508499 DNAH8Q96JB1 4490 aa5.39□□□□□ -1.55
USP46-207ENST00000508499 IGLV1-50A0A075B6I6 118 aa5.39□□□□□ -1.55
USP46-207ENST00000508499 IGKV2-28A0A075B6P5 120 aa5.39□□□□□ -1.55
USP46-207ENST00000508499 IGKV2D-28P01615 120 aa5.39□□□□□ -1.55
USP46-207ENST00000508499 IGLV6-57P01721 117 aa5.39□□□□□ -1.55
USP46-207ENST00000508499 HNRNPA3P51991 378 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms