RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 XAGE1AQ9HD64 81 aa14.07□□□□□ -0.16
SNCB-204ENST00000508006 PLA2G2DQ9UNK4 145 aa14.07□□□□□ -0.16
SNCB-204ENST00000508006 A0A1W2PNN7 141 aa14.06□□□□□ -0.16
SNCB-204ENST00000508006 SMIM13P0DJ93 91 aa14.06□□□□□ -0.16
SNCB-204ENST00000508006 SND1-IT1Q9HBX3 110 aa14.06□□□□□ -0.16
SNCB-204ENST00000508006 A0A0J9YXY3 114 aa14.05□□□□□ -0.16
SNCB-204ENST00000508006 ZNF815PA8K554 130 aa14.05□□□□□ -0.16
SNCB-204ENST00000508006 TIMM17BO60830 172 aa14.03□□□□□ -0.16
SNCB-204ENST00000508006 C7orf33Q8WU49 177 aa14.02□□□□□ -0.17
SNCB-204ENST00000508006 FAM168BA1KXE4 195 aa14.01□□□□□ -0.17
SNCB-204ENST00000508006 MIR7-3HGQ8N6C7 128 aa14.01□□□□□ -0.17
SNCB-204ENST00000508006 A0A0U1RRA0 63 aa14□□□□□ -0.17
SNCB-204ENST00000508006 FAM19A5Q7Z5A7 132 aaPredicted RBP14□□□□□ -0.17
SNCB-204ENST00000508006 TP73-AS1Q9UF72 201 aa14□□□□□ -0.17
SNCB-204ENST00000508006 IGLV5-37A0A075B6J1 123 aa13.99□□□□□ -0.17
SNCB-204ENST00000508006 KRTAP7-1Q8IUC3 87 aa13.99□□□□□ -0.17
SNCB-204ENST00000508006 TTTY13Q9BZ97 58 aa13.99□□□□□ -0.17
SNCB-204ENST00000508006 LOC107984156A0A0G2JMH3 177 aa13.98□□□□□ -0.17
SNCB-204ENST00000508006 RPL24P83731 157 aaKnown RBP13.98□□□□□ -0.17
SNCB-204ENST00000508006 ARL17AQ8IVW1 177 aa13.98□□□□□ -0.17
SNCB-204ENST00000508006 M0QXV9 152 aa13.97□□□□□ -0.17
SNCB-204ENST00000508006 SCGB1D4Q6XE38 83 aa13.97□□□□□ -0.17
SNCB-204ENST00000508006 PCP2Q8IVA1 136 aa13.97□□□□□ -0.17
SNCB-204ENST00000508006 OXTP01178 125 aa13.96□□□□□ -0.17
SNCB-204ENST00000508006 LBHQ53QV2 105 aaPredicted RBP13.96□□□□□ -0.17
SNCB-204ENST00000508006 PYY3Q5JQD4 70 aa13.96□□□□□ -0.17
SNCB-204ENST00000508006 C22orf24Q9Y442 160 aa13.96□□□□□ -0.17
SNCB-204ENST00000508006 VAMP8Q9BV40 100 aa13.95□□□□□ -0.18
SNCB-204ENST00000508006 TMEM238C9JI98 176 aa13.94□□□□□ -0.18
SNCB-204ENST00000508006 NKAPP1Q8N9T2 125 aa13.94□□□□□ -0.18
SNCB-204ENST00000508006 LITAFQ99732 161 aa13.94□□□□□ -0.18
SNCB-204ENST00000508006 MIEN1Q9BRT3 115 aa13.94□□□□□ -0.18
SNCB-204ENST00000508006 VPREB1P12018 145 aa13.93□□□□□ -0.18
SNCB-204ENST00000508006 ADAMTSL4-AS1Q5T5F5 129 aa13.93□□□□□ -0.18
SNCB-204ENST00000508006 PHF5AQ7RTV0 110 aaKnown RBP13.93□□□□□ -0.18
SNCB-204ENST00000508006 MRPL55Q7Z7F7 128 aaKnown RBP13.92□□□□□ -0.18
SNCB-204ENST00000508006 DAND5Q8N907 189 aa13.92□□□□□ -0.18
SNCB-204ENST00000508006 COX8AP10176 69 aa13.91□□□□□ -0.18
SNCB-204ENST00000508006 RPL37AP61513 92 aaKnown RBP13.91□□□□□ -0.18
SNCB-204ENST00000508006 Q6ZVH6 145 aa13.91□□□□□ -0.18
SNCB-204ENST00000508006 DLEU1O43261 78 aa13.9□□□□□ -0.18
SNCB-204ENST00000508006 SPATA45Q537H7 98 aa13.9□□□□□ -0.18
SNCB-204ENST00000508006 BOD1L2Q8IYS8 172 aa13.9□□□□□ -0.18
SNCB-204ENST00000508006 COPS9Q8WXC6 57 aa13.9□□□□□ -0.18
SNCB-204ENST00000508006 SPANXDQ9BXN6 97 aa13.9□□□□□ -0.18
SNCB-204ENST00000508006 SPANXCQ9NY87 97 aa13.9□□□□□ -0.18
SNCB-204ENST00000508006 PAM16Q9Y3D7 125 aa13.9□□□□□ -0.18
SNCB-204ENST00000508006 LRP1Q07954 4544 aaKnown RBP13.9□□□□□ -0.18
SNCB-204ENST00000508006 PPDPFQ9H3Y8 114 aa13.89□□□□□ -0.19
SNCB-204ENST00000508006 UBR4Q5T4S7 5183 aa13.89□□□□□ -0.19
SNCB-204ENST00000508006 NDUFC2O95298 119 aa13.88□□□□□ -0.19
SNCB-204ENST00000508006 HMCN2Q8NDA2 5059 aa13.88□□□□□ -0.19
SNCB-204ENST00000508006 UBE2BP63146 152 aa13.87□□□□□ -0.19
SNCB-204ENST00000508006 IFITM1P13164 125 aa13.86□□□□□ -0.19
SNCB-204ENST00000508006 KRTAP10-4P60372 401 aaPredicted RBP13.86□□□□□ -0.19
SNCB-204ENST00000508006 LINC00308Q8TCZ7 52 aa13.86□□□□□ -0.19
SNCB-204ENST00000508006 LINC00167Q96N53 147 aa13.86□□□□□ -0.19
SNCB-204ENST00000508006 M0R378 163 aa13.85□□□□□ -0.19
SNCB-204ENST00000508006 Q8NDZ9 215 aa13.85□□□□□ -0.19
SNCB-204ENST00000508006 SPANXB1Q9NS25 103 aaPredicted RBP13.85□□□□□ -0.19
SNCB-204ENST00000508006 TRBV10-2A0A0K0K1G8 114 aa13.84□□□□□ -0.19
SNCB-204ENST00000508006 PRR3P79522 188 aaKnown RBP13.84□□□□□ -0.19
SNCB-204ENST00000508006 SOSTDC1Q6X4U4 206 aa13.83□□□□□ -0.2
SNCB-204ENST00000508006 PSORS1C2Q9UIG4 136 aa13.83□□□□□ -0.2
SNCB-204ENST00000508006 S100A12P80511 92 aa13.82□□□□□ -0.2
SNCB-204ENST00000508006 FAT3Q8TDW7 4589 aa13.81□□□□□ -0.2
SNCB-204ENST00000508006 SLC25A34Q6PIV7 304 aa13.81□□□□□ -0.2
SNCB-204ENST00000508006 C14orf144Q96I85 54 aa13.81□□□□□ -0.2
SNCB-204ENST00000508006 IGLV1-50A0A075B6I6 118 aa13.8□□□□□ -0.2
SNCB-204ENST00000508006 NPC2P61916 151 aa13.8□□□□□ -0.2
SNCB-204ENST00000508006 GAGE10A6NGK3 116 aa13.79□□□□□ -0.2
SNCB-204ENST00000508006 EIF4EBP3O60516 100 aaPredicted RBP13.79□□□□□ -0.2
SNCB-204ENST00000508006 SRSF9Q13242 221 aaKnown RBP eCLIP13.79□□□□□ -0.2
SNCB-204ENST00000508006 KRTAP11-1Q8IUC1 163 aa13.79□□□□□ -0.2
SNCB-204ENST00000508006 RPL37AP8A6NKH3 93 aa13.78□□□□□ -0.2
SNCB-204ENST00000508006 HIGD1BQ9P298 99 aa13.78□□□□□ -0.2
SNCB-204ENST00000508006 SMIM6P0DI80 62 aa13.77□□□□□ -0.21
SNCB-204ENST00000508006 LOC105371267A0A1B0GV96 52 aa13.76□□□□□ -0.21
SNCB-204ENST00000508006 NCR3O14931 201 aa13.76□□□□□ -0.21
SNCB-204ENST00000508006 C1orf137Q5JT78 98 aa13.76□□□□□ -0.21
SNCB-204ENST00000508006 LINC00518Q8N0U6 118 aa13.76□□□□□ -0.21
SNCB-204ENST00000508006 IGKV2-28A0A075B6P5 120 aa13.75□□□□□ -0.21
SNCB-204ENST00000508006 IGKV2D-28P01615 120 aa13.75□□□□□ -0.21
SNCB-204ENST00000508006 MUSTN1Q8IVN3 82 aa13.75□□□□□ -0.21
SNCB-204ENST00000508006 CBY1Q9Y3M2 126 aa13.72□□□□□ -0.21
SNCB-204ENST00000508006 PRYO14603 147 aa13.71□□□□□ -0.21
SNCB-204ENST00000508006 BCE1O60756 84 aa13.71□□□□□ -0.21
SNCB-204ENST00000508006 IGLV7-43P04211 117 aa13.71□□□□□ -0.21
SNCB-204ENST00000508006 DDTP30046 118 aa13.71□□□□□ -0.21
SNCB-204ENST00000508006 S100A7L2Q5SY68 101 aa13.71□□□□□ -0.21
SNCB-204ENST00000508006 REG3GQ6UW15 175 aa13.71□□□□□ -0.21
SNCB-204ENST00000508006 HIST1H4GQ99525 98 aa13.71□□□□□ -0.21
SNCB-204ENST00000508006 KCNQ1DNQ9H478 68 aa13.71□□□□□ -0.21
SNCB-204ENST00000508006 TRBV10-3A0A0K0K1G6 114 aa13.7□□□□□ -0.22
SNCB-204ENST00000508006 IGLV6-57P01721 117 aa13.7□□□□□ -0.22
SNCB-204ENST00000508006 HNRNPA3P51991 378 aaKnown RBP13.7□□□□□ -0.22
SNCB-204ENST00000508006 TMEM126AQ9H061 195 aa13.7□□□□□ -0.22
SNCB-204ENST00000508006 PKHD1L1Q86WI1 4243 aa13.69□□□□□ -0.22
SNCB-204ENST00000508006 SPINK6Q6UWN8 80 aa13.69□□□□□ -0.22
SNCB-204ENST00000508006 C2orf91Q6ZV80 131 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms