RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 UBE2BP63146 152 aa12.29□□□□□ -0.44
SNX25-204ENST00000506896 SND1-IT1Q9HBX3 110 aa12.29□□□□□ -0.44
SNX25-204ENST00000506896 NMUP48645 174 aa12.28□□□□□ -0.44
SNX25-204ENST00000506896 LINC00158P58513 81 aa12.28□□□□□ -0.44
SNX25-204ENST00000506896 S100A6P06703 90 aa12.27□□□□□ -0.45
SNX25-204ENST00000506896 LGALS3P17931 250 aaKnown RBP12.27□□□□□ -0.45
SNX25-204ENST00000506896 MEIG1Q5JSS6 88 aa12.27□□□□□ -0.45
SNX25-204ENST00000506896 IGLV5-37A0A075B6J1 123 aa12.26□□□□□ -0.45
SNX25-204ENST00000506896 C20orf202A1L168 122 aa12.26□□□□□ -0.45
SNX25-204ENST00000506896 E9PLD3 99 aa12.26□□□□□ -0.45
SNX25-204ENST00000506896 TSPEAR-AS2P59090 65 aa12.26□□□□□ -0.45
SNX25-204ENST00000506896 MRPL55Q7Z7F7 128 aaKnown RBP12.26□□□□□ -0.45
SNX25-204ENST00000506896 S100A2P29034 98 aa12.25□□□□□ -0.45
SNX25-204ENST00000506896 C1orf137Q5JT78 98 aa12.25□□□□□ -0.45
SNX25-204ENST00000506896 AKR1D1P51857 326 aa12.24□□□□□ -0.45
SNX25-204ENST00000506896 RPL24P83731 157 aaKnown RBP12.24□□□□□ -0.45
SNX25-204ENST00000506896 SPINK6Q6UWN8 80 aa12.24□□□□□ -0.45
SNX25-204ENST00000506896 HIST3H2BBQ8N257 126 aa12.24□□□□□ -0.45
SNX25-204ENST00000506896 NKAPP1Q8N9T2 125 aa12.24□□□□□ -0.45
SNX25-204ENST00000506896 SMIM13P0DJ93 91 aa12.23□□□□□ -0.45
SNX25-204ENST00000506896 KRTAP11-1Q8IUC1 163 aa12.23□□□□□ -0.45
SNX25-204ENST00000506896 A0A0U1RRA0 63 aa12.21□□□□□ -0.45
SNX25-204ENST00000506896 SRSF9Q13242 221 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNX25-204ENST00000506896 HIST1H2BLQ99880 126 aa12.2□□□□□ -0.46
SNX25-204ENST00000506896 IGLV7-43P04211 117 aa12.19□□□□□ -0.46
SNX25-204ENST00000506896 VPREB1P12018 145 aa12.19□□□□□ -0.46
SNX25-204ENST00000506896 MIR7-3HGQ8N6C7 128 aa12.19□□□□□ -0.46
SNX25-204ENST00000506896 LINC00167Q96N53 147 aa12.19□□□□□ -0.46
SNX25-204ENST00000506896 GAGE10A6NGK3 116 aa12.15□□□□□ -0.46
SNX25-204ENST00000506896 RPL37AP8A6NKH3 93 aa12.15□□□□□ -0.46
SNX25-204ENST00000506896 SNRPEP62304 92 aaKnown RBP12.15□□□□□ -0.46
SNX25-204ENST00000506896 REG3GQ6UW15 175 aa12.15□□□□□ -0.46
SNX25-204ENST00000506896 TNXBP22105 4242 aa12.15□□□□□ -0.46
SNX25-204ENST00000506896 A0A0J9YXY3 114 aa12.14□□□□□ -0.47
SNX25-204ENST00000506896 MT1HL1P0DM35 61 aa12.14□□□□□ -0.47
SNX25-204ENST00000506896 BOD1L2Q8IYS8 172 aa12.14□□□□□ -0.47
SNX25-204ENST00000506896 LOC107984156A0A0G2JMH3 177 aa12.13□□□□□ -0.47
SNX25-204ENST00000506896 ARL17AQ8IVW1 177 aa12.13□□□□□ -0.47
SNX25-204ENST00000506896 DIRC1Q969H9 104 aa12.13□□□□□ -0.47
SNX25-204ENST00000506896 IGKV2D-26A0A0A0MRZ7 120 aa12.12□□□□□ -0.47
SNX25-204ENST00000506896 C5orf52A6NGY3 159 aa12.12□□□□□ -0.47
SNX25-204ENST00000506896 BCE1O60756 84 aa12.12□□□□□ -0.47
SNX25-204ENST00000506896 Q8NDZ9 215 aa12.12□□□□□ -0.47
SNX25-204ENST00000506896 IGLV1-50A0A075B6I6 118 aa12.11□□□□□ -0.47
SNX25-204ENST00000506896 ZNF815PA8K554 130 aa12.11□□□□□ -0.47
SNX25-204ENST00000506896 DAND5Q8N907 189 aa12.11□□□□□ -0.47
SNX25-204ENST00000506896 MIEN1Q9BRT3 115 aa12.11□□□□□ -0.47
SNX25-204ENST00000506896 IGKV2-28A0A075B6P5 120 aa12.1□□□□□ -0.47
SNX25-204ENST00000506896 M0R378 163 aa12.1□□□□□ -0.47
SNX25-204ENST00000506896 IGKV2D-28P01615 120 aa12.1□□□□□ -0.47
SNX25-204ENST00000506896 ATOH7Q8N100 152 aa12.1□□□□□ -0.47
SNX25-204ENST00000506896 TIMM17BO60830 172 aa12.09□□□□□ -0.47
SNX25-204ENST00000506896 HMCN2Q8NDA2 5059 aa12.08□□□□□ -0.48
SNX25-204ENST00000506896 H0Y9J4 135 aa12.08□□□□□ -0.48
SNX25-204ENST00000506896 ZNF861PO60384 105 aa12.08□□□□□ -0.48
SNX25-204ENST00000506896 RPL28P46779 137 aaKnown RBP12.07□□□□□ -0.48
SNX25-204ENST00000506896 ANKRD39Q53RE8 183 aa12.07□□□□□ -0.48
SNX25-204ENST00000506896 LINC01600Q96MT4 127 aa12.07□□□□□ -0.48
SNX25-204ENST00000506896 HSBP1L1C9JCN9 74 aa12.05□□□□□ -0.48
SNX25-204ENST00000506896 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
SNX25-204ENST00000506896 NCR3O14931 201 aa12.04□□□□□ -0.48
SNX25-204ENST00000506896 NDUFC2O95298 119 aa12.04□□□□□ -0.48
SNX25-204ENST00000506896 LITAFQ99732 161 aa12.04□□□□□ -0.48
SNX25-204ENST00000506896 TTTY13Q9BZ97 58 aa12.04□□□□□ -0.48
SNX25-204ENST00000506896 TMEM126AQ9H061 195 aa12.04□□□□□ -0.48
SNX25-204ENST00000506896 TRBV10-2A0A0K0K1G8 114 aa12.03□□□□□ -0.48
SNX25-204ENST00000506896 SCGB1D4Q6XE38 83 aa12.03□□□□□ -0.48
SNX25-204ENST00000506896 SPANXB1Q9NS25 103 aaPredicted RBP12.03□□□□□ -0.48
SNX25-204ENST00000506896 UBE2AP49459 152 aa12.02□□□□□ -0.49
SNX25-204ENST00000506896 TMEM238C9JI98 176 aa12.01□□□□□ -0.49
SNX25-204ENST00000506896 SCGB1D1O95968 90 aa12.01□□□□□ -0.49
SNX25-204ENST00000506896 S100A12P80511 92 aa12.01□□□□□ -0.49
SNX25-204ENST00000506896 PRYO14603 147 aa12□□□□□ -0.49
SNX25-204ENST00000506896 SOSTDC1Q6X4U4 206 aa12□□□□□ -0.49
SNX25-204ENST00000506896 NPC2P61916 151 aa11.99□□□□□ -0.49
SNX25-204ENST00000506896 FAM19A1Q7Z5A9 133 aa11.99□□□□□ -0.49
SNX25-204ENST00000506896 KRTAP13-1Q8IUC0 172 aa11.99□□□□□ -0.49
SNX25-204ENST00000506896 PCP2Q8IVA1 136 aa11.99□□□□□ -0.49
SNX25-204ENST00000506896 LINC00308Q8TCZ7 52 aa11.99□□□□□ -0.49
SNX25-204ENST00000506896 KCNQ1DNQ9H478 68 aa11.99□□□□□ -0.49
SNX25-204ENST00000506896 TRBV10-3A0A0K0K1G6 114 aa11.97□□□□□ -0.49
SNX25-204ENST00000506896 KRTAP10-8P60410 259 aa11.97□□□□□ -0.49
SNX25-204ENST00000506896 COPS9Q8WXC6 57 aa11.97□□□□□ -0.49
SNX25-204ENST00000506896 SPANXDQ9BXN6 97 aa11.97□□□□□ -0.49
SNX25-204ENST00000506896 SPANXCQ9NY87 97 aa11.97□□□□□ -0.49
SNX25-204ENST00000506896 EIF4EBP3O60516 100 aaPredicted RBP11.96□□□□□ -0.49
SNX25-204ENST00000506896 DDTP30046 118 aa11.96□□□□□ -0.49
SNX25-204ENST00000506896 Q6ZVH6 145 aa11.96□□□□□ -0.49
SNX25-204ENST00000506896 S100A7L2Q5SY68 101 aa11.95□□□□□ -0.5
SNX25-204ENST00000506896 KRTAP1-4P0C5Y4 121 aa11.94□□□□□ -0.5
SNX25-204ENST00000506896 SPRR1AP35321 89 aa11.94□□□□□ -0.5
SNX25-204ENST00000506896 PRLHP81277 87 aa11.94□□□□□ -0.5
SNX25-204ENST00000506896 LINC00337Q8N6G1 96 aa11.94□□□□□ -0.5
SNX25-204ENST00000506896 PPDPFQ9H3Y8 114 aa11.94□□□□□ -0.5
SNX25-204ENST00000506896 IFITM1P13164 125 aa11.93□□□□□ -0.5
SNX25-204ENST00000506896 IGLV6-57P01721 117 aa11.92□□□□□ -0.5
SNX25-204ENST00000506896 CBY1Q9Y3M2 126 aa11.92□□□□□ -0.5
SNX25-204ENST00000506896 ETDCA0A1B0GVM5 59 aa11.9□□□□□ -0.5
SNX25-204ENST00000506896 LINC00518Q8N0U6 118 aa11.9□□□□□ -0.5
SNX25-204ENST00000506896 KRTAP4-16G5E9R7 235 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms