RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 LGALS3P17931 250 aaKnown RBP5.6□□□□□ -1.51
SCAMP1-202ENST00000506858 NMUP48645 174 aa5.6□□□□□ -1.51
SCAMP1-202ENST00000506858 PTTG1IPP53801 180 aa5.6□□□□□ -1.51
SCAMP1-202ENST00000506858 RNF151Q2KHN1 245 aa5.6□□□□□ -1.51
SCAMP1-202ENST00000506858 Q6ZSA8 131 aa5.6□□□□□ -1.51
SCAMP1-202ENST00000506858 TP73-AS1Q9UF72 201 aa5.6□□□□□ -1.51
SCAMP1-202ENST00000506858 A0A087WYN8 130 aa5.59□□□□□ -1.51
SCAMP1-202ENST00000506858 F8WDY8 70 aa5.59□□□□□ -1.51
SCAMP1-202ENST00000506858 CXCL5P42830 114 aa5.59□□□□□ -1.51
SCAMP1-202ENST00000506858 C9orf129Q5T035 196 aaKnown RBP5.59□□□□□ -1.51
SCAMP1-202ENST00000506858 PCP2Q8IVA1 136 aa5.59□□□□□ -1.51
SCAMP1-202ENST00000506858 DAND5Q8N907 189 aa5.59□□□□□ -1.51
SCAMP1-202ENST00000506858 SPACA4Q8TDM5 124 aa5.59□□□□□ -1.51
SCAMP1-202ENST00000506858 ERG28Q9UKR5 140 aa5.59□□□□□ -1.51
SCAMP1-202ENST00000506858 NDUFC2-KCTD14E9PQ53 114 aa5.59□□□□□ -1.52
SCAMP1-202ENST00000506858 LINC00158P58513 81 aa5.59□□□□□ -1.52
SCAMP1-202ENST00000506858 PYY3Q5JQD4 70 aa5.59□□□□□ -1.52
SCAMP1-202ENST00000506858 KRTAP7-1Q8IUC3 87 aa5.59□□□□□ -1.52
SCAMP1-202ENST00000506858 MYMXA0A1B0GTQ4 84 aa5.58□□□□□ -1.52
SCAMP1-202ENST00000506858 TLX1NBP0CAT3 122 aa5.58□□□□□ -1.52
SCAMP1-202ENST00000506858 JOSD1Q15040 202 aaPredicted RBP5.58□□□□□ -1.52
SCAMP1-202ENST00000506858 MEIG1Q5JSS6 88 aa5.58□□□□□ -1.52
SCAMP1-202ENST00000506858 VPS13BQ7Z7G8 4022 aa5.57□□□□□ -1.52
SCAMP1-202ENST00000506858 ZNF815PA8K554 130 aa5.57□□□□□ -1.52
SCAMP1-202ENST00000506858 CIRBPQ14011 172 aaKnown RBP5.57□□□□□ -1.52
SCAMP1-202ENST00000506858 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
SCAMP1-202ENST00000506858 SERTAD4-AS1Q5TG53 156 aa5.57□□□□□ -1.52
SCAMP1-202ENST00000506858 FAM19A5Q7Z5A7 132 aaPredicted RBP5.57□□□□□ -1.52
SCAMP1-202ENST00000506858 Q8NDZ9 215 aa5.57□□□□□ -1.52
SCAMP1-202ENST00000506858 SRRM2Q9UQ35 2752 aaKnown RBP5.57□□□□□ -1.52
SCAMP1-202ENST00000506858 A0A0J9YXY3 114 aa5.56□□□□□ -1.52
SCAMP1-202ENST00000506858 NPC2P61916 151 aa5.56□□□□□ -1.52
SCAMP1-202ENST00000506858 ADAMTSL4-AS1Q5T5F5 129 aa5.56□□□□□ -1.52
SCAMP1-202ENST00000506858 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
SCAMP1-202ENST00000506858 PAM16Q9Y3D7 125 aa5.56□□□□□ -1.52
SCAMP1-202ENST00000506858 HSBP1L1C9JCN9 74 aa5.56□□□□□ -1.52
SCAMP1-202ENST00000506858 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
SCAMP1-202ENST00000506858 MIR7-3HGQ8N6C7 128 aa5.56□□□□□ -1.52
SCAMP1-202ENST00000506858 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
SCAMP1-202ENST00000506858 HERV-K104P63124 156 aa5.55□□□□□ -1.52
SCAMP1-202ENST00000506858 PRR3P79522 188 aaKnown RBP5.55□□□□□ -1.52
SCAMP1-202ENST00000506858 C14orf144Q96I85 54 aa5.55□□□□□ -1.52
SCAMP1-202ENST00000506858 PLAC8Q9NZF1 115 aa5.55□□□□□ -1.52
SCAMP1-202ENST00000506858 LOC105371267A0A1B0GV96 52 aa5.54□□□□□ -1.52
SCAMP1-202ENST00000506858 SPATA45Q537H7 98 aa5.54□□□□□ -1.52
SCAMP1-202ENST00000506858 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
SCAMP1-202ENST00000506858 GAGE10A6NGK3 116 aa5.53□□□□□ -1.52
SCAMP1-202ENST00000506858 SOSTDC1Q6X4U4 206 aa5.53□□□□□ -1.52
SCAMP1-202ENST00000506858 LITAFQ99732 161 aa5.53□□□□□ -1.52
SCAMP1-202ENST00000506858 VAMP8Q9BV40 100 aa5.53□□□□□ -1.52
SCAMP1-202ENST00000506858 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
SCAMP1-202ENST00000506858 COX17Q14061 63 aa5.52□□□□□ -1.53
SCAMP1-202ENST00000506858 SFTA2Q6UW10 78 aa5.52□□□□□ -1.53
SCAMP1-202ENST00000506858 SCGB1D4Q6XE38 83 aa5.52□□□□□ -1.53
SCAMP1-202ENST00000506858 BOD1L2Q8IYS8 172 aa5.52□□□□□ -1.53
SCAMP1-202ENST00000506858 C22orf24Q9Y442 160 aa5.52□□□□□ -1.53
SCAMP1-202ENST00000506858 RPL37AP8A6NKH3 93 aa5.51□□□□□ -1.53
SCAMP1-202ENST00000506858 M0QXV9 152 aa5.51□□□□□ -1.53
SCAMP1-202ENST00000506858 PKIGQ9Y2B9 76 aa5.51□□□□□ -1.53
SCAMP1-202ENST00000506858 EPM2AB3EWF7 344 aa5.5□□□□□ -1.53
SCAMP1-202ENST00000506858 NCR3O14931 201 aa5.5□□□□□ -1.53
SCAMP1-202ENST00000506858 COX8AP10176 69 aa5.5□□□□□ -1.53
SCAMP1-202ENST00000506858 VPREB1P12018 145 aa5.5□□□□□ -1.53
SCAMP1-202ENST00000506858 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
SCAMP1-202ENST00000506858 LINC00167Q96N53 147 aa5.49□□□□□ -1.53
SCAMP1-202ENST00000506858 FLG2Q5D862 2391 aaPredicted RBP5.49□□□□□ -1.53
SCAMP1-202ENST00000506858 LINC00587B1AMM8 73 aa5.48□□□□□ -1.53
SCAMP1-202ENST00000506858 Q5VSD8 79 aa5.48□□□□□ -1.53
SCAMP1-202ENST00000506858 LINC00308Q8TCZ7 52 aa5.48□□□□□ -1.53
SCAMP1-202ENST00000506858 C7orf33Q8WU49 177 aa5.48□□□□□ -1.53
SCAMP1-202ENST00000506858 TIMM17BO60830 172 aa5.48□□□□□ -1.53
SCAMP1-202ENST00000506858 MUSTN1Q8IVN3 82 aa5.48□□□□□ -1.53
SCAMP1-202ENST00000506858 Q8N1X5 172 aa5.48□□□□□ -1.53
SCAMP1-202ENST00000506858 NKAPP1Q8N9T2 125 aa5.48□□□□□ -1.53
SCAMP1-202ENST00000506858 PRO1933Q9H354 126 aa5.48□□□□□ -1.53
SCAMP1-202ENST00000506858 IGKV2-28A0A075B6P5 120 aa5.47□□□□□ -1.53
SCAMP1-202ENST00000506858 IGKV2D-28P01615 120 aa5.47□□□□□ -1.53
SCAMP1-202ENST00000506858 UBE2BP63146 152 aa5.47□□□□□ -1.53
SCAMP1-202ENST00000506858 MRPL55Q7Z7F7 128 aaKnown RBP5.47□□□□□ -1.53
SCAMP1-202ENST00000506858 PSORS1C2Q9UIG4 136 aa5.47□□□□□ -1.53
SCAMP1-202ENST00000506858 PLA2G2DQ9UNK4 145 aa5.47□□□□□ -1.53
SCAMP1-202ENST00000506858 HNRNPA3P51991 378 aaKnown RBP5.46□□□□□ -1.54
SCAMP1-202ENST00000506858 KRTAP10-4P60372 401 aaPredicted RBP5.46□□□□□ -1.54
SCAMP1-202ENST00000506858 RPL37AP61513 92 aaKnown RBP5.46□□□□□ -1.54
SCAMP1-202ENST00000506858 RPL24P83731 157 aaKnown RBP5.46□□□□□ -1.54
SCAMP1-202ENST00000506858 SLC25A34Q6PIV7 304 aa5.46□□□□□ -1.54
SCAMP1-202ENST00000506858 C2orf91Q6ZV80 131 aa5.46□□□□□ -1.54
SCAMP1-202ENST00000506858 MIEN1Q9BRT3 115 aa5.46□□□□□ -1.54
SCAMP1-202ENST00000506858 IGLV5-37A0A075B6J1 123 aa5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 TMEM238C9JI98 176 aa5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 SRSF9Q13242 221 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 SPANXDQ9BXN6 97 aa5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 SPANXCQ9NY87 97 aa5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 PKHD1L1Q86WI1 4243 aa5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 LOC107984156A0A0G2JMH3 177 aa5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 DLEU1O43261 78 aa5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 S100A12P80511 92 aa5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 C1orf137Q5JT78 98 aa5.45□□□□□ -1.54
SCAMP1-202ENST00000506858 ARL17AQ8IVW1 177 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms