RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ZNF56Q15929 161 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 SPANXN1Q5VSR9 72 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 TRIQKQ629K1 86 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 KRTAP26-1Q6PEX3 210 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 CARD19Q96LW7 228 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 CCDC32Q9BV29 185 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 EPDR1Q9UM22 224 aa2.39□□□□□ -2.03
HERC4-213ENST00000506515 A0A1W2PRE2 83 aa2.38□□□□□ -2.03
HERC4-213ENST00000506515 CCDC160A6NGH7 325 aa2.38□□□□□ -2.03
HERC4-213ENST00000506515 NCR2O95944 276 aa2.38□□□□□ -2.03
HERC4-213ENST00000506515 CXCL1P09341 107 aa2.38□□□□□ -2.03
HERC4-213ENST00000506515 ZNF25P17030 456 aaPredicted RBP2.38□□□□□ -2.03
HERC4-213ENST00000506515 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
HERC4-213ENST00000506515 SERF2P84101 59 aa2.38□□□□□ -2.03
HERC4-213ENST00000506515 SS18Q15532 418 aa2.38□□□□□ -2.03
HERC4-213ENST00000506515 TEX261Q6UWH6 196 aa2.38□□□□□ -2.03
HERC4-213ENST00000506515 A0A096LNI7 61 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 GRIFINA4D1Z8 144 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 F2Z2F3 143 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 H3BPC8 53 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 H3BVH4 76 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 RPL12P30050 165 aaKnown RBP2.37□□□□□ -2.03
HERC4-213ENST00000506515 RAB5CP51148 216 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 ZNF80P51504 273 aaPredicted RBP2.37□□□□□ -2.03
HERC4-213ENST00000506515 UBE2G1P62253 170 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 TPRXLQ17RH7 258 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 C2orf91Q6ZV80 131 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 OR2D3Q8NGH3 330 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 AP1S3Q96PC3 154 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 MAP1LC3AQ9H492 121 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 NIT2Q9NQR4 276 aa2.37□□□□□ -2.03
HERC4-213ENST00000506515 MUC21A0A0G2JKD1 596 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 MUC21A0A140T8X8 626 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 C1orf196B1AJZ1 125 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 NUPR1O60356 82 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 S100A6P06703 90 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 TRGC1P0CF51 173 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 RPS20P60866 119 aaKnown RBP2.36□□□□□ -2.03
HERC4-213ENST00000506515 C9orf116Q5BN46 136 aaPredicted RBP2.36□□□□□ -2.03
HERC4-213ENST00000506515 SPAG11AQ6PDA7 123 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 CLPSL2Q6UWE3 100 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 SMIM15Q7Z3B0 74 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 OR5A1Q8NGJ0 315 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 LINC00526Q96FQ7 95 aa2.36□□□□□ -2.03
HERC4-213ENST00000506515 C11orf86A6NJI1 115 aa2.35□□□□□ -2.03
HERC4-213ENST00000506515 COX7A2LO14548 114 aa2.35□□□□□ -2.03
HERC4-213ENST00000506515 RPL28P46779 137 aaKnown RBP2.35□□□□□ -2.03
HERC4-213ENST00000506515 UBE2BP63146 152 aa2.35□□□□□ -2.03
HERC4-213ENST00000506515 FP248Q71RG6 208 aaPredicted RBP2.35□□□□□ -2.03
HERC4-213ENST00000506515 MIEN1Q9BRT3 115 aa2.35□□□□□ -2.03
HERC4-213ENST00000506515 BIN3Q9NQY0 253 aa2.35□□□□□ -2.03
HERC4-213ENST00000506515 TNFSF18Q9UNG2 199 aa2.35□□□□□ -2.03
HERC4-213ENST00000506515 ARL2-SNX15V9GYD0 113 aa2.35□□□□□ -2.03
HERC4-213ENST00000506515 M0QY20 66 aa2.34□□□□□ -2.03
HERC4-213ENST00000506515 M0R036 132 aa2.34□□□□□ -2.03
HERC4-213ENST00000506515 ARL14EPLP0DKL9 152 aa2.34□□□□□ -2.03
HERC4-213ENST00000506515 GCHFRP30047 84 aa2.34□□□□□ -2.03
HERC4-213ENST00000506515 PSMG3Q9BT73 122 aaPredicted RBP2.34□□□□□ -2.03
HERC4-213ENST00000506515 IGKV2D-26A0A0A0MRZ7 120 aa2.33□□□□□ -2.04
HERC4-213ENST00000506515 IGKV3OR2-268A0A0C4DH90 116 aa2.33□□□□□ -2.04
HERC4-213ENST00000506515 LINC00959A0A1B0GUT2 108 aa2.33□□□□□ -2.04
HERC4-213ENST00000506515 PPP1R17O96001 155 aa2.33□□□□□ -2.04
HERC4-213ENST00000506515 XCL1P47992 114 aa2.33□□□□□ -2.04
HERC4-213ENST00000506515 HINT1P49773 126 aaPredicted RBP2.33□□□□□ -2.04
HERC4-213ENST00000506515 NKX2-5P52952 324 aaPredicted RBP2.33□□□□□ -2.04
HERC4-213ENST00000506515 GNG5P63218 68 aa2.33□□□□□ -2.04
HERC4-213ENST00000506515 DAND5Q8N907 189 aa2.33□□□□□ -2.04
HERC4-213ENST00000506515 MRPL35Q9NZE8 188 aaKnown RBP2.33□□□□□ -2.04
HERC4-213ENST00000506515 NDUFA12Q9UI09 145 aa2.33□□□□□ -2.04
HERC4-213ENST00000506515 NDUFA1O15239 70 aa2.32□□□□□ -2.04
HERC4-213ENST00000506515 DDTP30046 118 aa2.32□□□□□ -2.04
HERC4-213ENST00000506515 CRIP1P50238 77 aa2.32□□□□□ -2.04
HERC4-213ENST00000506515 JOSD1Q15040 202 aaPredicted RBP2.32□□□□□ -2.04
HERC4-213ENST00000506515 RGS21Q2M5E4 152 aa2.32□□□□□ -2.04
HERC4-213ENST00000506515 PCOTHQ58A44 107 aa2.32□□□□□ -2.04
HERC4-213ENST00000506515 COMMD7Q86VX2 200 aa2.32□□□□□ -2.04
HERC4-213ENST00000506515 NUP35Q8NFH5 326 aa2.32□□□□□ -2.04
HERC4-213ENST00000506515 HSPB11Q9Y547 144 aa2.32□□□□□ -2.04
HERC4-213ENST00000506515 TMSB15BA0A087X1C1 80 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 BORCS7-ASMTA0A0B4J1R7 106 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 A0A0G2JQZ4 141 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 I3L3M4 83 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 LYRM1O43325 122 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 PFDN1O60925 122 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 IFNA1P01562 189 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 MGPP08493 103 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 AKR1C3P42330 323 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 ASB16-AS1Q495Z4 193 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 PHF5AQ7RTV0 110 aaKnown RBP2.31□□□□□ -2.04
HERC4-213ENST00000506515 Q86TA4 180 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 SLC51BQ86UW2 128 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 BAGE2Q86Y30 109 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 OR10AG1Q8NH19 301 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 PPP1R1CQ8WVI7 109 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 Q9BRP9 147 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 V9GYH0 126 aa2.31□□□□□ -2.04
HERC4-213ENST00000506515 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
HERC4-213ENST00000506515 TRBV30A0A0K0K1B3 111 aa2.3□□□□□ -2.04
HERC4-213ENST00000506515 CTXND1A0A1B0GTU2 59 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms