RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
SMN1-204ENST00000506163 LINC00167Q96N53 147 aa10.86□□□□□ -0.67
SMN1-204ENST00000506163 MAP1LC3CQ9BXW4 147 aa10.86□□□□□ -0.67
SMN1-204ENST00000506163 SFTA2Q6UW10 78 aa10.85□□□□□ -0.67
SMN1-204ENST00000506163 A0A0U1RRA0 63 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 IGKCP01834 107 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 S100A1P23297 94 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 LBHQ53QV2 105 aaPredicted RBP10.84□□□□□ -0.67
SMN1-204ENST00000506163 LINC01600Q96MT4 127 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 GAGE10A6NGK3 116 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 SYS1-DBNDD2H3BUS1 97 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 NDUFA12Q9UI09 145 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 LEPROTO15243 131 aa10.83□□□□□ -0.68
SMN1-204ENST00000506163 SMIM13P0DJ93 91 aa10.83□□□□□ -0.68
SMN1-204ENST00000506163 VPREB1P12018 145 aa10.83□□□□□ -0.68
SMN1-204ENST00000506163 LINC00158P58513 81 aa10.83□□□□□ -0.68
SMN1-204ENST00000506163 LINC01545Q5VT33 79 aa10.8□□□□□ -0.68
SMN1-204ENST00000506163 PLEKHB2Q96CS7 222 aa10.8□□□□□ -0.68
SMN1-204ENST00000506163 J3QQQ9 107 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 C3orf79P0CE67 100 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 KRTAP10-8P60410 259 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 HERV-K104P63124 156 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 REG3GQ6UW15 175 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 MYMXA0A1B0GTQ4 84 aa10.78□□□□□ -0.68
SMN1-204ENST00000506163 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
SMN1-204ENST00000506163 H0Y9J4 135 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 MEIG1Q5JSS6 88 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 PET117Q6UWS5 81 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 MIR7-3HGQ8N6C7 128 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 DIRC1Q969H9 104 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 HERVK_113P61574 105 aa10.76□□□□□ -0.69
SMN1-204ENST00000506163 IGLV1-50A0A075B6I6 118 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 IGKV2-28A0A075B6P5 120 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 ZNF861PO60384 105 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 IGKV2D-28P01615 120 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 LOC100996750A0A140TA64 210 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 E9PLD3 99 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 BCE1O60756 84 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 KRTAP1-4P0C5Y4 121 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 RPL24P83731 157 aaKnown RBP10.75□□□□□ -0.69
SMN1-204ENST00000506163 KRTAP4-6Q9BYQ5 205 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 DAND5Q8N907 189 aa10.74□□□□□ -0.69
SMN1-204ENST00000506163 LGALS3P17931 250 aaKnown RBP10.73□□□□□ -0.69
SMN1-204ENST00000506163 KRTDAPP60985 99 aa10.73□□□□□ -0.69
SMN1-204ENST00000506163 TMEM238C9JI98 176 aa10.72□□□□□ -0.69
SMN1-204ENST00000506163 NMUP48645 174 aa10.72□□□□□ -0.69
SMN1-204ENST00000506163 KRTAP13-1Q8IUC0 172 aa10.72□□□□□ -0.69
SMN1-204ENST00000506163 BOD1L2Q8IYS8 172 aa10.72□□□□□ -0.69
SMN1-204ENST00000506163 HMCN2Q8NDA2 5059 aa10.71□□□□□ -0.69
SMN1-204ENST00000506163 IGKV2D-26A0A0A0MRZ7 120 aa10.71□□□□□ -0.69
SMN1-204ENST00000506163 LINC00587B1AMM8 73 aa10.71□□□□□ -0.69
SMN1-204ENST00000506163 CTAG1AP78358 180 aa10.71□□□□□ -0.69
SMN1-204ENST00000506163 ADAMTSL4-AS1Q5T5F5 129 aa10.7□□□□□ -0.7
SMN1-204ENST00000506163 LOC107984156A0A0G2JMH3 177 aa10.69□□□□□ -0.7
SMN1-204ENST00000506163 M0R378 163 aa10.69□□□□□ -0.7
SMN1-204ENST00000506163 ARL17AQ8IVW1 177 aa10.69□□□□□ -0.7
SMN1-204ENST00000506163 PRR26Q8N8Z3 221 aa10.69□□□□□ -0.7
SMN1-204ENST00000506163 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
SMN1-204ENST00000506163 EIF4EBP3O60516 100 aaPredicted RBP10.68□□□□□ -0.7
SMN1-204ENST00000506163 HIST3H2BBQ8N257 126 aa10.68□□□□□ -0.7
SMN1-204ENST00000506163 TTTY13Q9BZ97 58 aa10.68□□□□□ -0.7
SMN1-204ENST00000506163 TMEM126AQ9H061 195 aa10.68□□□□□ -0.7
SMN1-204ENST00000506163 NCR3O14931 201 aa10.67□□□□□ -0.7
SMN1-204ENST00000506163 RPL28P46779 137 aaKnown RBP10.67□□□□□ -0.7
SMN1-204ENST00000506163 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
SMN1-204ENST00000506163 PRLHP81277 87 aa10.65□□□□□ -0.7
SMN1-204ENST00000506163 ATOH7Q8N100 152 aa10.65□□□□□ -0.7
SMN1-204ENST00000506163 LITAFQ99732 161 aa10.65□□□□□ -0.7
SMN1-204ENST00000506163 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
SMN1-204ENST00000506163 UBE2AP49459 152 aa10.64□□□□□ -0.71
SMN1-204ENST00000506163 ANKRD39Q53RE8 183 aa10.64□□□□□ -0.71
SMN1-204ENST00000506163 NPC2P61916 151 aa10.62□□□□□ -0.71
SMN1-204ENST00000506163 FAM19A1Q7Z5A9 133 aa10.62□□□□□ -0.71
SMN1-204ENST00000506163 TRBV10-3A0A0K0K1G6 114 aa10.61□□□□□ -0.71
SMN1-204ENST00000506163 ANAPC11Q9NYG5 84 aa10.61□□□□□ -0.71
SMN1-204ENST00000506163 C20orf202A1L168 122 aa10.6□□□□□ -0.71
SMN1-204ENST00000506163 ZNF815PA8K554 130 aa10.6□□□□□ -0.71
SMN1-204ENST00000506163 KCNQ1DNQ9H478 68 aa10.6□□□□□ -0.71
SMN1-204ENST00000506163 A0A087X002 238 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 S100A2P29034 98 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 SPRR1AP35321 89 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 SNRPEP62304 92 aaKnown RBP10.58□□□□□ -0.72
SMN1-204ENST00000506163 TRBV10-2A0A0K0K1G8 114 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
SMN1-204ENST00000506163 TIMM17BO60830 172 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 S100A6P06703 90 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 PRYO14603 147 aa10.57□□□□□ -0.72
SMN1-204ENST00000506163 NDUFC2O95298 119 aa10.57□□□□□ -0.72
SMN1-204ENST00000506163 LINC00308Q8TCZ7 52 aa10.57□□□□□ -0.72
SMN1-204ENST00000506163 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
SMN1-204ENST00000506163 MIEN1Q9BRT3 115 aa10.56□□□□□ -0.72
SMN1-204ENST00000506163 SPANXB1Q9NS25 103 aaPredicted RBP10.56□□□□□ -0.72
SMN1-204ENST00000506163 C5orf52A6NGY3 159 aa10.55□□□□□ -0.72
SMN1-204ENST00000506163 IGLV6-57P01721 117 aa10.54□□□□□ -0.72
SMN1-204ENST00000506163 DDTP30046 118 aa10.54□□□□□ -0.72
SMN1-204ENST00000506163 LINC00337Q8N6G1 96 aa10.54□□□□□ -0.72
SMN1-204ENST00000506163 KRTAP13-2Q52LG2 175 aa10.52□□□□□ -0.73
SMN1-204ENST00000506163 HIGD2AQ9BW72 106 aa10.52□□□□□ -0.73
SMN1-204ENST00000506163 RPL13AP40429 203 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms